Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      --------->WOX13(1)                                   <---------WRKY38(1)                         <---------ANAC58                         <---------ANAC46                         <---------ANAC58                                            --------->MYB52(1)                         <---------ANAC55(1)                              --------->ICU4                         --------->ANAC55(2)                  --------------->AGL15 <---------ATHB51                     <---------GLK1(1)    --------------->AGL15   <---------ATHB12  <---------AHL20(2)            <---------ANAC58   <------ZmHOX2a(1)              <---------------AGL15--------->AHL20(1)       --------->ATHB12  <---------ANAC55(2)              ------>ZmHOX2a(1)       --------->YAB1   <-----------GT1   --------->GLK1(1)--------->MYB46(3)----------->RAV1(2)----------->GT1  <-----------GT1<---------ANAC46  <---------WRKY12 <---------ALFIN1    --------->MYB52(1)     ------ ------>GT1 <---------ANAC58--------->SPL7====================================MADS_MADS        ------   gtttttaacttattgggtttcggagttgcgtaaggagtcaaccactatatagagacactcctgtctcaatgaagtaatggttaaaaataatggaagaacg  3740400                                                                --------->ANAC55(2)                                                                <---------ANAC46                                                                <---------ANAC55(2)                                                      <---------AHL20(2)                                                      --------->AHL20(1)                                                      --------->AHL20(2)        --------->GLK1(2)                                    <----------DOF2   <---------AHL20(1)      --------->HSFC1(2)   --                         --------->YAB1 <----------DOF2<---------AHL20(2)     --------->HSFB2a(1) ---                        <---------AHL20(2)        --------->AHL20(2)   <------MYB83               <-- --->ANAC58            <---------AHL20(2)        <---------AHL20(2)    <------MYB46(1)          ----- --->ANAC58            --------->AHL20(2)        --------->AHL20(2)   --------->MYB59       ---------   caaaacatggaattgtttttttttttttaataagacttctttctttaaaaaataaataaaattgtctcgtattaggtcgaagaatccaaaatttcaaagc  3740500                                                                                                 <---                                                                                                 ----                                                                                                 <---           --------->AHL20(2)                                                                <-------           <---------AHL20(2)                               --------->TGA1a           <---------CCA1(1)          <---------AHL20(2)                                ==========================bZIP_DOF<------      <---------AHL20(2)                                    <---------TGA1a           <---------RVE1(1) <---------YAB1                                             <---------O2             <---------ARR11(3) ------->ATHB12                                             ==========================bZIP_DOF<------ ------>ICU4                                            <------ZmHOX2a(1)            --------->ARR11(3) -------YAB1   <---------AHL20(2)         ----------->HVH21 --------->O2   <---------DAG2    <------- ---->YAB1--------->AHL20(2)      ====================================bZIP_DOF       <---------GLK1(2) ->DOF2  <---------WOX13(1)       ---------->DOF2 <------ZmHOX2a(1)        <----------DOF2 <---------   atgattatttgatttatttagtttttgtcaaccttctaaagtatttgacataggagtaggacacgagtcactactaacttttctaaagattttttgcttt  3740600    <---------DAG2                                                               <---------ANAC58    <----------DOF2                                                              <---------ANAC46 <-----------GT1                                                       <------MYB83 ------AHL20(2)         <-----------GT1                                <------MYB46(1) ----->AHL20(2)   --------->AHL20(2)                                  <---------TOE2(3) ------YAB1       <---------AHL20(2)                                  --------->MYB59      ---------- --ANAC58         <---------AHL20(1)                             <---------MYB52(1)   <---------AtMYB61 ----DOF2    <---------AHL20(2)                             --------->ARR11(3)   <---------ANAC58 ---DAG2     <XXXXXXXXXXXXXXXXXXXXMIR1886.1                 <---------ARR11(3)<---------MYB52(1) --ANAC58    --------->AHL20(2)          <-----------GT1   --------->CCA1(1)<---------ANAC58 --GT1  <---------YAB1 <<<<<<<<<<GT-3b<---------YAB1       --------->RVE1(1)<---------ANAC58       <-   ttattactttatgattttattttatttttcttatctgattatgttacccgattcaactaaaatatctgttattaggtttcgtttcgttttggtttcaatg  3740700                     <---------ANAC58                              --------->ANAC58                     <---------ANAC58                              --------->ANAC58                   <---------YAB1                             --------->AtLEC2                  -----                <---------ATHB51                         <----------DOF2                   <--------- -->CBF   <---------TOE2(3)  ----------->TBP       ---------->ID1*TSS                    <----------- -----ZmHOX2a(2)--------->ICU4--------->YAB1  <---------MYB52(1) ---------->DOF2      ------>ZmHOX2a(1)   gatcaacagtttatggaaattattcgtggctataaaaaactaatatcagttttgtcttcctttcatgcaaagcaaacaaaaactcttcctctcttctcct  3740800                <---------At4g35610                --------->At4g35610                --------->ZAT2      <----------DOF2                   --------->YAB1                <---------ANAC46 ->ZmHOX2a(1)   <---------ZAT2       <----------DOF2    <---------AtLEC2 ---------------ANAC81      <---------ANAC58<---------ZAT14    <-----------RAV1(2) -------------ANAC81        <---------ANAC58--------->ZAT14  <-----------HVH21               <-------   ctgtttctctttctcttgagctggctcttgtcttgtctactttcattacagtgactctgcatgcttcaggtctcgtctaattcttgaattctcttctttt  3740900                                                        <---------CCA1(2)            <---------WRKY18(1)             <----------DOF2                            ------>ZmHOX2a(1)           --------->WRKY12          <-----------GT1                             ------>ZmHOX2a(2)             --------->WRKY38(1)     <---------MYB52(1)                              <------ZmHOX2a(2)           --------->ATHB12    --------->LBD16                                 --------->ARR14(2)           <---------ICU4   <---------ANAC55(1)                              <---------ARR11(3)          <---------YAB1   <---------ANAC55(2)                              <---------ARR14(2)  --------->AHL20(2)   ----------->GT1                                  --------->ARR11(3) --------->AHL20(2)   --------->ANAC55(2)                             --------->RVE1(1)   <---------AHL20(1)   <---------ANAC58                      ------>ZmHOX2a(1)             <---------AHL20(2)   <---------ANAC58                      ====================HOX2a_HOX2a<---------AHL20(2)   --------   <---------ANAC46                      ===================HOX2a_HOX2a--------->AHL20(1)<----------DOF2 ---DOF2  <---------AHL20(2) <---------GLK1(2)  ---------->DOF2<---------ETT(2) --------->ICU4   ctgttccgtaatttactttctagggtctctagatttgtgtctcctctaacaaaagatcctatctttcgacaaatttaatttcatcattgacctttgtcga  3741000                                                            <----------DOF2                                                            --------------->AGL15                                                      <---------ICU4                                                      --------->ATHB12             <---------ATHB12                                                      <--------ATHB1              --------->ANAC58                                                      -------->HAHB4              --------->ANAC58                                                     <---------ATHB12            --------->WOX13(1)                                                     <---------YAB1      <---------AHL20(2)                                                     --------->ICU4      --------->AHL20(2)                                                    <---------TOE2(3)    <---------AHL20(1)                                                  <---------AHL20(2)     --------->AHL20(1)                                                 --------->AHL20(2)     --------->AHL20(2)    <------ -->ID1                     --------->HSFB2a(2)  <---------AHL20(2)     <---------ATHB12    <--------   ttccattctctctctatctctctgtttcttcgaaaacctagaggttttgaatttaatgattcctttttatgtcaataaatttgcaatcaatgggagcttt  3741100                                                                                                  <--                                                                                                  <--                                                                                                 ----                                                                                             <-------                                                                                             --------                                                             <---------AHL20(2)          <---------YAB1                                                 <---------AGP1                          --------->ICU4                                                 --------->ARR11(3)                    --------->YAB1                                                 <---------ARR11(3)         <---------DAG2<---------ICU4                                     <-----------GT1         --------->AHL20(2) <-----------GT1 <----        --------->TOE2(3)           --------->ICU4<------ZmHOX2a(2)--------->ARR11(3)  <---------ICU4    --------->YAB1                <---------ICU4 --------->AGP1    <---------ARR11(3) <---------YAB1 ----DOF2    --------->ARR11(3) --------->At5g28300------>ZmHOX2a(2)        <----------DOF2  <------- -At4g35610 <---------CCA1(2)  ----------->GT1  <---------CCA1(2)<---------AHL20(2) --------->YAB1<--   ttaaaatcatcgttatatctataaacaaaaaaacagtaattactcttcttagatctaaaacaattaataaatctttcccttttttctcatcataattttt  3741200                                                          <---------ANAC58           --------->TOE2(2)     <-----------GT1                                      <---------ANAC46           --------->TOE1(2)    <-----------GT1                             <------NtERF2                       ----------->RAV1(2) -------ANAC46                                --------->PCF2                 ----------->GT1 -------ANAC58                       <----------DOF2      <---------ANAC58<---------ZAT2 ------>ID1                          <---------DAG2<---------ZAT2         <---------At4g35610 --ICU4                        <---------ARR14(2)  <---------At4g35610    --------->At4g35610 ->AHL20(2)            <---------ANAC58     --------->ANAC58            <---------WRKY12 -------GT1            <---------ANAC58     --------->ANAC58       <---------HSFB2a(2)              < --AHL20(2)----------->GT1     <---------MYB52(1)<-----------RAV1(2)  <-----------HVH21      -------- -------ANAC58  --------->ICU4 --------->ARR14(2)<---------ALFIN1  --------->HSFB2a(2)       --------   tcgtatttaactcttgtaaaaatttgcttagccgtttcgctttctcaggccccaggtgattcgtgtcttctaggtcagcttgtgaaacctgagagaagcc  3741300  Previous    Next  AGI:  At1g11170.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61240.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61240.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61240.4); similar to unknown [Picea sitchensis] (GB:ABK25584.1); contains InterPro domain Protein of unknown function DUF707 (InterPro:IPR007877) Range:  from: 3740765    to: 3744675    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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