Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->YAB1              --------->AHL20(2)   <---------WOX13(1)             <---------AHL20(2)  --------->ATHB12            --------->ANAC55(2)         --------->AHL20(2)   <---------ANAC58               <---------ANAC55(2)         <---------AHL20(1)   <---------ANAC46        ----------->GT1                          ------         <---------AHL20(2)   <---------ANAC58       ----------->GT1            --------->YAB1<------ <---------ANAC46     <---------ATHB12               <---------ZAT6          ----------->GT1 <<<<<<<< ------>WRKY12<---------AHL20(2)<---------YAB1    --------->DAG2         <-----------GT1   <---------YAB1 -------->HVH21     --------->WOX13(1)           ---------->DOF2    <---------YAB1--------->ICU4 <---   ttgacgagtattttatttatttcaatcaagttgtgtgattgacatcttaaaaaaagtgttaaaacgtattgcgattaaccagtaatacttgttatttttc  3732700                                                                   --------->YAB1                                                                  --------->ICU4                -----                                                                  <---------YAB1                -----                                  ---------->ID1       <---------MYB52(1)                 -----------                                 <------------------------ANAC81<---------ICU4          --------->DEAR3(2)   --------->TOE2(3)          <----------DOF2        ------>ZmHOX2a(1)            <---------AHL20(2) ---->ID1                  <-----------GT1      <----------DOF2 --------->YAB1 --------->AHL20(1) -----GT1             <----------DOF2        ---------->ID1    <---------ATHB12<---------AHL20(1) <<GT-3b              <---------DAG2         <-----------GT1   --------->ICU4  --------->AHL20(2) -------DOF2    --------------->AtSPL8      <-----------GT1  --------->WOX13(1)<---------ARR11(3)   <   tttttcgtcaaactgaacatagtactttttaactttgttttttttttttcctttcctgttactcaatcatgataaaaacaatattttaaaaccgacaata  3732800                                                                              <---------ANAC58                                                                              --------->ANAC55(2)                                         <---------ANAC58                     <---------ANAC55(1)                                         <---------ANAC46                     <---------ANAC46                 <---------AHL20(2)      <---------ANAC58               <---------WOX13(1)            --------->AHL20(1)   <---------MYB46(3)              <---------TOE1(3)            --------->AHL20(2)   --------->MYB52(2)              <---------TOE2(3)       ---------->DOF2 ---->YAB1  <---------AHL20(1)  <---------MYB55(1)               --------->MYB59   ----------->GT1 ---->AHL20(2)  --------->AHL20(2)<-------GAMYB           <---------AHL20(2)  <---------ANAC58 >RAV1(1)   <---------ARR11(3) <---------MYB52(1)         --------->AHL20(2)  <---------ANAC55(2)---- ----------ID1 <---------AHL20(2)--------->MYB55(2) <----------DOF2  <-------TEIL  <---------ANAC46   aaaaaacaaaacaatattttaaatttgtaatccgttagttgtgacttgtgagtgctatatttatatttaggttgatttatacgtgtagtagaaaaggaag  3732900                                                                              <---------YAB1                    <----------ID1                                <---------YAB1                  --------->MYB52(1)                      <---------ANAC58   --------->TOE2(3)              --------->DAG2                              <---------ANAC46  --------->YAB1      <-----------TGA1              --------->GLK1(2)     <---------ANAC58  <---------ICU4 ------->GT1 ---------->DOF2<---------PCF2          --------->ATHB12     --------->YAB1    --------->AHL20(2)   ggtattttcgtcagaaaaagtaacgacgagggtccaatattctgaagttttcaacgatttgtgtgtgtattattctcatcatcaatgacataaataaaca  3733000                       <---------GLK1(1)                       --------->GLK1(1)                      --------->ARR14(2)                                      ----------->GT1                  <---------LBD16                                             --------->ANAC58                 -------->P                                                   --------->ANAC58                 --------->MYB52(1)                                         <------ZmHOX2a(1)                ------->GAMYB                                              <----------ID1                --------->MYB55(1)                                       --------->DAG2               --------->MYB46(3)               <------------CBF         <---------------AtSPL8   <--          --------->YAB1                   ---------->DOF2              ---------->DOF2      <-------      --------->AHL20(2)               <---------AHL20(2)      <---------ARR14(2)            <------- <---------AHL20(2)   <---------ARR14(2)--------->YAB1         --------->ARR14(2)          <--------- --------->AHL20(2) --------->LBD16   <---------AHL20(2)       --------->GLK1(2)         ---------->ID1 --------->AHL20(1)------->GAMYB      --------->AHL20(2)      <---------GLK1(2)       <-------TEIL<--   aaataaaataaaacataacaaccggaaatgtgtttttttttttaataaagaattgaaaatgacagaatctgagaaaaaggacgaaaaattcgtcgcttta  3733100                                          <---------DAG2                                       *TSS                                   <-------PIF5                                   ------->MYC2                   <----------DOF2                                   ------->PIF5              <----------DOF2                                   <-------MYC3       --------->RVE1(1)                                   <-------MYC2      --------->GLK1(2) --------DOF2                      ------->MYC3      --------->ARR11(3)           --------->AHL20(2) ---DOF2                       <---------ZAT2        <---------ARR11(3)         <----------DOF2   <-- --DAG2                        <---------At4g35610  --------->CCA1(1)     <---------ARR11(3)      --- ---------------ANAC81        <---------DEAR3(2)    --------->RVE1(1)     --------->ARR11(3)      <-- -------DAG2       <---------MYB52(1)  <---------ALFIN1    <------------------------ANAC81        ---   cttttttttatcttcgtctctgttttgttcgtctgctcgtgccactctttcaaaaaatctcttcttttctttctaagttcttctttaaatctctaatctc  3733200                                                  --------->ARR11(3)                                                  <---------ARR11(3)                                                 --------->GLK1(1)                                              --------->LBD16                                             <---------HSFB2a(2)                                             --------->HSFB2a(2)                                        <---------HSFB2a(1)                                        --------->HSFB2a(1)                                        --------->HSFC1(2)                                       <-----------ARR10                                       --------->GLK1(2)                                       <---------ARR11(1)    --------->ANAC58                   --------->ARR14(2)    --------->ANAC58                   ------->TEIL                                                 -  <------ZmHOX2a(1)                    <---------ARR14(2)                                          <- -------At4g35610                     <---------CCA1(2)              <---------ANAC46              <- ------>ZAT2                          <---------ARR14(1)        <---------ANAC58                   -- -------ZAT2                          <---------GLK1(2)         <---------ANAC58                   -- ------>At4g35610                <-----------GT1 <---------GLK1(1)  ---------->ID1            <------   agcaggaagcaatctcttatgtctcaagtttctattttccgaatctcccagaaatcttcaactctgtcttgtcgtctagtcacattttgaatttttaaac  3733300    ----------->RAV1(1)    ------>NtERF2   ----------->HVH21                                           <---------At4g35610   <---------ETT(1)                             ----------->GT1--------->At4g35610 -------->ARR14(2)                              <------MYB83   --------->ZAT2 --------At4g35610                              <---------At4g35610 --------ZAT2                      --------->YAB1         <---------ANAC58 ------->At4g35610        <----------DOF2       <------MYB46(1)<---------ZAT2   ------->TEIL ------->ZAT2       <---------AHL20(2)   ---------->DOF2  <---------ANAC58  <---------TOE1(2) -----GT1 <---------AHL20(2)      <-------TEIL <---------MYB46(3)    ------>ZmHOX2a(1)    <<<<<<<<<<GATA-1   cagctccgacatttttttgtttttaattcttttcgattcataacaaaggctggtgatttggcttcagcttcctagtcgcatgaatctactgaaatcgagt  3733400                                 <----------DOF2                                 ------>ZmHOX2a(1)                                --------------->AGL15                                <---------------AGL15                               ===========================================MADS_MADS                               <-----------------AGL3                               ----------------->AGL3                          --------->ANAC55(2)                          <---------ANAC55(2)                          <---------ANAC46                         <-------TEIL                     --------->ANAC58                     --------->ANAC46                     --------->ANAC58                       --------->ATHB12                 --------->CCA1(2)  --------->YAB1          --------->ATHB51                 <-------TEIL              ----------->GT1------->TEIL--------->ARR11(3)<---------AHL20(2)               ---------           <---------ANAC46  <---------ARR14(2)            <---------YAB1    --------->TOE1(3)           <---------ANAC58  --------->ARR14(2)         <-----------------AGL3         ---------->DOF2           <---------ANAC58 <---------CCA1(2) --------->ATHB12               --------->TOE2(3)     <-   agaaaatggcgaagcgtggatataagctacgtatccttttatagttcttcattggtgctatattattggaaacttgtaacctgaataacaaaagatacaa  3733500                                                                       <---------TOE1(3)                                                                       <---------TOE2(3)                            --------->ANAC46                        <---------MYB52(1)                 --------->AHL20(2)                               <---------ANAC46                 <---------AHL20(2)                               <---------ANAC58      <-------TEIL<---------AHL20(2)                          <---------ZAT14                <-------   --------->At4g35610  <-----------GT1        <-----------RAV1(1)<---------ZAT6           <---------ANAC46   <---------At4g35610<-----------GT1         <---------TOE2(3)   <---------ANAC58        <------NtERF2 >CCA1(2)    <---------AHL20(2)   --------->TOE2(3)           --------->ZAT14         <---------MYB46(3) ---------DOF2  <---------WOX13(1)<----------DOF2          <---------At5g28300       <---------AtMYB61   actttagctacatatttgatttattttcacccctaactttagaaatttgatgttgttcattcactgtagcgttagggtttatctgcattggtggggttta  3733600  Previous    Next  AGI:  At1g11160.1    Description:  nucleotide binding. similar to WD-40 repeat family protein / katanin p80 subunit, putative [Arabidopsis thaliana] (TAIR:AT1G61210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43364.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 3733139    to: 3739842    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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