Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <------MYB46(1)                                                                   <------MYB83                                                                  <---------MYB46(3)                                                                  <---------AtMYB61             <----                                  ------>ZmHOX2a(1)              <---------WOX13(1)             <----                                <---------ANAC58               --------->ATHB12        --------->ANAC46       <-----------GT1          <---------ANAC58              <---------YAB1    --------->ARR11(3) ----ZmHOX2a(1)      <------ZmHOX2a(1)                      <----------DOF2     <---------ARR11(3) ---TOE2(1) ------>MYB46(1)   <-----------GT1         <---------ICU4        ---------->DOF2  <------- ---TOE1(1) ------>MYB83--------->KAN4(1)         <---------AHL20(2)  ----------->GT1--------->MYB52(1)   ggagagattaaaccaaattgagaggaatattgtttcctgtcttattctggttttaattttggctttgattggtggaaaaaaagaactcaacgtaatcact  3714800                                                                 --------->ICU4                                                                --------->AHL20(1)                                                           <---------AHL20(2)                 <------                                                   <---------ZAT14   --------->ATHB12         -------                                                   --------->ZAT18  <---------YAB1     --------------                                                   <---------ZAT18<---------ICU4       <-------------                                                   --------->ZAT14--------->YAB1       <----------DOF2                                                 --------------->AtSPL3          ----------->RAV1(2)                                                 --------------->AtSPL8        --------->ANAC58                           <---------ARR14(2)   <---------At5g28300 --------->ICU4    <--------------   <---------YAB1 <---------ZAT6        <-----------GT1 <---------ICU4  ------>ZmHOX2a(2)     ------- -----DAG2      <---------ANAC46    <------ZmHOX2a(1)  --------->ICU4-------->HAHB4   <-------------- ------DOF2  --------->AtLEC2  <----------DOF2 <-----------GT1 --------->YAB1  --------->ANAC46 ----GT1----------->ARR10  <---------ZAT14  <---------ICU4 --------->AHL20(2)  --------->ANAC58     -   tttttatgcttagacatgcagtgttagtgtatactttaggattaactaattactgtactaattaaaaataatgatcgaatcacgcctgtctttaataggt  3714900    --------->ALFIN1 ---ANAC55(2)                                   <----------DOF2 ---->GT1                              --------->TOE2(3) ->AGL15                             <---------AHL20(2)                                            -- --AGL15                         <---------AHL20(2)                                           <------ ---AGL3                --------->GLK1(2)    <---------AHL20(2)             ------>ZmHOX2a(1) ------- -->ANAC55(2)          --------->ARR11(3)    <-----------GT1            <-----------GT1       ------- ---AGL1   ------>ZmHOX2a(2)   <---------CCA1(2)--------->TOE2(3)    --------->ZAT14          <------ --------->DOF2        <---------GLK1(2)  <---------ICU4         <-----------GT1<----------DOF2   ---   aacaaagtgttgatcgtggctcaaagattctgcatatattttcttaattactttagtaaacaaaaattcactattctcctctctttgtaagtttttcgag  3715000                                         ------------>CBF                                     ----------->GT1                                 --------->LBD16               --------->AHL20(2)           ---------->DOF2      --------->LBD16<---------AHL20(2)          <---------ATHB12     <------NtERF2  <---------AHL20(2)      ------------>CBF         --------->HSFB2a(2)             <---------AHL20(2) --------->At4g35610           <---------HSFB2a(2)    <----------DOF2 ------->DAG2                  --------->LBD16<---------AHL20(1) ---HSFB2a(2)                 <---------LBD16 --------->AHL20(2) -->HSFC1(1)            --------->ALFIN1<-----------GT1   <----------DOF2 -->HSFB2a(2)          <-------MYC3 --------->DAG2 <-----------GT1        --------->AHL20(2) <------- ---HSFC1(1)           ------->MYC3---------->DOF2 ---------->ID1         ----------->TBP    <------- ------->DOF2  <------ZmHOX2a(1)--------->ANAC46  <-----------GT1       <----------DOF2<----------DOF2   aaaagctgagcaataaaggacaacatgtgtgtccccgaaaagttacaatttttttcctttcttttttaatttctctttaaatcccaaaactttcactttc  3715100                 <---------ANAC58                 <---------ANAC58           <---------ALFIN1      <-----------GT1                                                                  <----------ID1 ---DOF2 ------->GAMYB------>ZmHOX2a(1)                                         ------->GAMYB --DAG2 --------->ANAC46            ------>ZmHOX2a(1)   <---------CCA1(2)     -------->P       <-----   tcacatattaaccccacttgcttcctctcttccttctccttcttcatcttcttccctcatctctctctcttctctgtatcaacccaaaaacgaagaacat  3715200                                                                                  <---------At4g35610                                                                                  --------->At4g35610                                                               <---------YAB1     --------->ZAT2  ---                                                             --------->YAB1       --------->GLK1(1)                                                             ------->GAMYB        <---------GLK1(1)                                                       --------->TOE1(3)    ------>MYB46(1)       ---        <-----------GT1                              ------->TEIL           ------>MYB83     <-------      <----------DOF2                        ---------->DOF2--------->MYB46(3)    <---------ZAT2 <--- --------->HSFC1(2)                    <---------ZAT18 --------->TOE2(3)    --------->MYB52(1)  <---- <---------HSFC1(2)             --------->ARR11(3)  --------->ARR14(2)    --------->AtMYB61 ------->TEIL -------CBF<----------DOF2      <---------ARR11(3)  <---------ARR14(2)  ------>NtERF2  --------->At4g35610   tgaagcttctttactttctcacacataaatgagagaccttgagcacttaaagacgaacctcaaccatcaatggccacctatcggagctccgatgaatctc  3715300          <---------ANAC46                                       --------->MYB52(1)          <---------ANAC58                                    --------->ANAC46     ----------->ARR10                                  --------->ARR14(2)                   <------- --->NtERF2                                             <---------GLK1(2)                    <------- ------>LBD16   --------->GLK1(1)                  <----------DOF2 --------->MYB46(3)       --------- --GLK1(1)<---------ANAC58              <---------TOE2(3)    ---------->ID1                 --------- ------DEAR3(1) <---------GLK1(1)      <---------DOF5.7(2)<-------TEIL                     ------>ZmHOX2a(1) -----LBD16--------->LBD16           --------->DOF5.7(2)<---------ARR14(2)     <---------CCA1(2)   cggcgagaagagccgtggaaatctcagttcgatgactcagttaacgctgtctcctttggattcgtcgcaacggctattctcatctctatgttcctcgtca  3715400                                                                                        <---------LBD16                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                              --------->ARR14(2)                                                                              <---------ARR14(2)                                                                            --------->LBD16                                                                           <---------ANAC46        <---------HSFB2a(2)                             ------>ZmHOX2a(1)  <---------ANAC58       <-- ----HVH21                  --------->AtMYB61      <---------GLK1(2)       <---------ANAC58     ----- ----TGA1              --------->SPL7  --------->MYB46(3)         <---------DEAR3(2)<---------GLK1(2) >ANAC46--------->HSFB2a(2)--------->MYB46(3)     --------->At4g35610     <---------LBD16     <------ >bZIP60(2)        --------------->AtSPL3         <---------At4g35610   ------>ZmHOX2a(1)   <--------   tggctatcttcgagagactcattcgtacaaccactacttcaactactaactcagattcctcttcaagtcgggtccttccgggtatggattctcgggtcgg  3715500       <---------At4g35610       --------->ABI4(2)       <---------ZAT2      --------->ALFIN1                               <-----------GT1                                -  <---------At5g28300                           <----------DOF2                                     - <-----------GT1                           --------->ANAC58                             --------->DAG2 --------->MYB52(1)                        --------->ANAC58                             <------------ --------DOF2              <---------YAB1 --------------->AtSPL8          --------->AHL20(2)        - ------>GT1            <-------GAMYB  --------->ANAC58  <---------DAG2    <---------AHL20(2) -------- ---ANAC46      --------->ZAT14       --------->ANAC58  <----------DOF2   <---------ATHB51  <-------TEIL ---HVH21 <---------At4g35610--------->WOX13(1) <---------DAG2          --------->YAB1 ---------->DOF2   gtttaacggtgctgctactaaactcggttatcaatctcccaaggcaagtactttttcactttattcttctctaaaaataattcatagaataaagttcgta  3715600                       -------->ATHB1                       --------->ATHB12                       <---------ICU4                       --------->ATHB51                      <---------YAB1               <-----------RAV1(1)         --------->TOE2(3)                   <---------AHL20(2) -------->ANAC58     <----------DOF2        --------->AHL20(2) -------->ANAC46   ------------>ATHB5       <---------AHL20(2) ---AtSPL8------>ZmHOX2a(1)            <---------MYB52(1) -------->ANAC58 ---------->ID1      ----------->GT1 --->GT1 --------->TOE1(3)           <---------ZAT6                 --------->GLK1(2)   ----------->GT1   acacacaaattccttaattgtcgcattattgtctacttactgttaattaaatgttgacacatttttggctaatctgattttgacacttagatgttaaact  3715700  Previous    Next  AGI:  At1g11120.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61170.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77872.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24110.1) Range:  from: 3715229    to: 3719681    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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