Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <-----------ARR10                                            --------->GLK1(2)                                            <---------ARR11(3)                                            --------->ARR11(3)                                       ----------->GT1                                  <---------ATHB12              ---------->DOF2    --------->ANAC58                       <---------At4g35610 -->ZAT18 --------->ANAC58       --------->ANAC58                       --------->At4g35610 --------- ---ZAT18 --------->ANAC58      --------->WOX13(1)        <-----------GT1                   <XXXXXXXX   attcagaacaacaagctaaagttttggaatctagcaatcaatggaaaatctcatttcatttcactaattttctcagctaaaactcgattagaagaatcta  3666700                                                                                          --------->ZAT14       --------->REM1(1)                                                                  <---------ZAT14       --------->ANAC46                                  --------->TOE2(2)      ------>ZmHOX2a(2) --------->GLK1(1)                                       --------->TOE1(2)      ===================== >GLK1(2)                                               ----------->RAV1(2) ------>ZmHOX2a(1) XXXXXXXXXXXXMIR781    <-----------GT1<--------P       --------->MYB52(1) ----------->RAV1(2)   <----   gagaattctacatcacacagaaatttcactaaattgtagggtaagtgttcgatgaaatacctgagagagagtctcttcctgatccaaacgagtatagagg  3666800                                                                            ---------->DOF2                                                               <---------AHL20(1)                                                               --------->AHL20(2)                                                               <---------AHL20(2)                  --                                                               --------->AHL20(1)                 <--               --------------->AGL15                          <---------ATHB12   --------->GLK1(2)<--        ---------->DOF2                                       --------->AHL20(2)<---------GLK1(2) <-- ==HOX2a_HOX2a <---------------AGL15            <---------GLK1(2)        --------->YAB1       ------- --ZmHOX2a(1)------->TEIL                      --------->At4g35610   <---------YAB1      --------->CCA1(2)   aaacaatttccaaagaacctataagagcaatagaagagaacccaaaatcagattccacaaaccaataaattccgattataaagaatcggagagacgaatc  3666900                                                           <---------LBD16                                                          <---------LBD16   --------->DAG2 ----->TEIL                                               ------>ZmHOX2a(1)---------->DOF2 -------CCA1(2)             --------->TOE1(2)             =============HOX2a_HOX2a -------ARR14(1)          <------ZmHOX2a(2)         <<<<<<<<<TBF1  --------->ANAC58 -------GLK1(2)          --------->ARR11(3)      <<<<<<<<<TBF1     --------->ANAC58               --- >TEIL                   <---------ARR11(3) --------->KAN4(2)   <------ZmHOX2a(2)       --------->AHL20(2)   gaatctcaaggtactaacatcgacgaagatcatgggaacaagagtttattcttcttcttcctcgggatcaagaaacagaaagtgagtctataaaatatga  3667000                                                                                                -----                                                                                                <----                                               --------->GLK1(2)                                <----                                           <---------DDF1                                 --------->LBD16                                          --------->ETT(2)                               <---------ANAC58                                          <---------bZIP60(1)                      <---------ZAT18              <------NtERF2               <<<<<<<<<<bZIP19                 <------ZmHOX2a(1)---------             --------->ANAC58          --------->ALFIN1                --------->ICU4    <---------ANAC46       ---------->DOF2      --------->DAG2<---------ETT(2)     <---------bZIP60(2)<---------MYB52(1)  <------ZmHOX2a(1)      ---------->DOF2  <<<<<<<<<<bZIP23    --------->SPL7 --------->GLK1(2) <----- ------->DOF2--------->ANAC58    ---------->DOF2          <---------LBD16--------->MYB59 <---------ANAC58   gaaaggactcaaaggaggcaacttggagaaagagtgaaagagtgtcgacattctatggactcgggacgttgcaattaggaatcggttcgctccgtggcag  3667100                                                                       <---------DDF1                                                                      >>>>>>>>>>bZIP19        <---------YAB1                                                >>>>>>>>>>bZIP23  --------->ZAT6                                                      <<<<<<<<<<bZIP19 ---->At4g35610    <---------ANAC46                                   <<<<<<<<<<bZIP23 -----At4g35610    --------->ANAC58                                   <---------ETT(2) ---GAMYB          --------->ANAC58     ------------>CBF              --------->ETT(2) --->AtMYB77    ----------->TGA1       *TSS <---------ATHB12         --------->DDF1                 < ----MYB46(3)   ----------->HVH21 <-----------ARR10             --------->ARR14(2)                  <   ttgaacactgatgagagactgacgcataactaaacagagcttcccaatcttgtctatacttagccaaatatgtcgacattttcgcgttattctgttttct  3667200                                                       <---------AHL20(2)                                                      --------->AHL20(2)          --------->TOE2(3)        --------->TOE2(3)              <----------DOF2<---------AHL20(2)        <-----------GT1 ----------DOF2              --------->MYB52(1)       <---------AHL20(1)   --------->ATHB12 ---------DAG2   ---------->DOF2       <---------YAB1 --------->AHL20(1)  --------->ICU4       ------   cacttttatttcttaaaaacaaagacataataaacggagtgatttttggaaaacaatttatttcagtggaaacagaatgatttaacttaatatgaaacag  3667300                           <-----------GT1                     <-------TEIL                                                                   -                 --------->ARR11(3)              ------>MYB83                                 <------                 <---------ARR11(3)              -------->P                                --------->ZAT14                 --------->AHL20(1)              ------>MYB46(1)     --------->GLK1(2)--------->ZAT14                 <---------AHL20(1)      --------->ZAT6              --------->ARR14(2)    <---------ZAT14                --------->YAB1           --------->ANAC46            <---------ARR14(2) --------->At4g35610            <---------HSFB2a(2)        <---------ALFIN1         ----------->GT1       <---------ZAT14 ----->GT1  --------->HSFB2a(2)   <---------MYB46(3)   <-------TEIL <---------GLK1(1) --------->ZAT18   aaaatcaatttgttccaaaaatattcattttcccatttgttccacactaccaacaagttcatgaaacagaaaatccgattaagtcaagtctactgcagaa  3667400                                            --------->ATHB12                                           <---------YAB1                                ----------->GT1                                                 -----                               <------MYB46(1)                         <------ZmHOX2a(1)    ---------                               <------MYB83--------->ICU4    --------->At4g35610            <--------                              <---------TOE2(2)         <---------ANAC58              <---------At4g35610       ----------->GT1        <---------TOE1(2)         <---------ANAC58              --------->ZAT2      ----------->GT1        <---------MYB52(1)   <------ZmHOX2a(1)---------->DOF2    <---------ZAT2 -------->AHL20(2)    ---------->DOF2    <------ZmHOX2a(1)   <---------At4g35610      --------->At4g35610 ---At4g35610      --------->TOE2(3) ---------->DOF2   --------->At4g35610            <------NtERF2 <   gattatatgagttaaaaaaaaacttaaagccgtaggtttaaaaggatgattaggagtagcttaagctgaaaaaggatgagaagtaggcagcttaagctaa  3667500                                                     <---------ATHB12                                                    --------->ANAC58                                                    --------->ANAC46                                                    --------->ANAC58         <----------DOF2                     --------->KAN4(2)            <---------ZAT2    --------->At5g28300                     --------->KAN4(1)             --------->ZAT2    --------->DOF5.7(2)                     <----------TaMYB80            <---------At4g35610   ----------->GT1                          <---------KAN4(1)           --------->HSFB2a(2)    ------ ----->DOF2                                <---------KAN4(2)            <---------HSFB2a(2)--------->ANAC46 >At4g35610                            --------->LBD16           ------->TEIL         <----------DOF2 -At4g35610                 <-----------GT1---------->TaMYB80 <---------YAB1   <---------ARR11(3) ------ZmHOX2a(1) --------->ALFIN1   ----------->RAV1(2)    <------ZmHOX2a(1) -----------------------   aaggacggtaactttgtaagatggggagtttcacttctcccctggtatattcccaagcaataggatgaatgcttccagcagggtcttcctttcactcctc  3667600  Previous    Next  AGI:  At1g10970.1    Description:  ZIP4 (ZINC TRANSPORTER 4 PRECURSOR); cation transmembrane transporter. Identical to Zinc transporter 4, chloroplast precursor (ZIP4) [Arabidopsis Thaliana] (GB:O04089;GB:Q56XS7); similar to IRT3 (Iron regulated transporter 3), cation transmembrane transporter/ metal ion transmembrane transporter [Arabidopsis thaliana] (TAIR:AT1G60960.1); similar to ZIP-like zinc transporter [Thlaspi caerulescens] (GB:AAK69429.1); contains InterPro domain Zinc/iron permease, fungal and plant; (InterPro:IPR004698); contains InterPro domain Zinc/iron permease; (InterPro:IPR003689) Range:  from: 3665087    to: 3667139    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g10980.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41520.1); contains InterPro domain Transmembrane receptor, eukaryota; (InterPro:IPR009637) Range:  from: 3667248    to: 3669902    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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