Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->AHL20(2)                                                      <---------AHL20(2)                                                     --------->ICU4                                                     <---------YAB1                                                   --------->ATHB51                                                   <--------HAHB4                                                   -------->HAHB4                                                   <---------ICU4                  ------>ZmHOX2a(2)                                                   --------->YAB1                  ==================                       <---------YAB1              <--------ATHB1             <---------WOX13(1)                     --------->YAB1               <---------YAB1           <---------AHL20(2)                    <---------ATHB51              --------->AHL20(2)     <---------ANAC55(2)                  --------->WOX13(1)              --------->ICU4         --------->ANAC55(2)                 --------->AHL20(2)               <---------ATHB51    <------ZmHOX2a(2)        <-----                <---------ATHB12                --------->YAB1        ===============================               --------->ANAC58       --------->ARR11(3)             <---------ARR11(3)     <--------     ---------->DOF2<---------ATHB12  <---------AHL20(1)             --------->ARR11(3)<---------ARR14(2) ------TOE2(3) --------->ANAC58 <----------DOF2<---------YAB1       <------ZmHOX2a(1)  --------->ARR14(2) ---->DOF2--------->ZAT18 <---------YAB1     --------->YAB1         ======================HOX2a_HOX2a   aggaatcgaaagttcacaatcaattatgttgattctttaatatatacttataataattaatagaaaaataggatcatgtaattgatccatatactcagga  3627300                                                        <---------ANAC58                                                        <---------ANAC58                                                        <---------ANAC46                                                   <---------AtLEC2                                                <-------PIF5                                     <---      --------->TOE1(2)                        <---------ANAC58                                  ----      --------->TOE2(2)       <---------bZIP60(2) <-------TEIL                                   ---- =HOX2a_HOX2a     <---------ANAC46             <---------ANAC58                             <-------- -ZmHOX2a(1)      ----------->GT1          <---------WOX13(1)                             <---------ANAC46 =HOX2a_HOX2a   <---------ANAC46<---------ANAC46------->PIF5            <---------AtLEC2  ----------- -LBD16      --------->ICU4   <---------ANAC46------->TEIL             <-------TEIL<---------ANAC46   ttagtaaacctaggcatgatgtgtgaattgtgatgtgtatacatgatggacgtgcatggtgtgagaagaaatgtgcatgggaattgtgggtttagtgaaa  3627400                                                         <---------ATHB51                                                         --------->ICU4    ----------->GT1 ------ANAC55(2)                                  ----------->GT1         <---------TOE2(3) ----->ANAC55(2)---------->DOF2              --------->LBD16              --------->DAG2 <----------- ------->GT1------------------------>ANAC81 <---------ANAC46            ---------->DOF2<-----------GT1 -ZAT6    <---------ANAC55(2)               <---------RAP2.6(2)    ----------->GT1  --------->TOE2(3) >GT1     ----------->GT1                  <---------LBD16  <---------ANAC46----------->GT1        <-   cgtgatttagtcaagtgaaaaagaagagaagaagagcatggaatttgcggctatgtaaaattatgggtatgctaaaaaggttaaaatgttaactgttttt  3627500                                                                  --------->DAG2                                                     <---------AHL20(2)     --------->TOE2(3)                               --------->AHL20(2)                         <----     --------->TOE1(3)                              <---------AHL20(2)                      --------- -MYB.PH3(1)          <-----------------------TaNAC69(2)        ---------->DOF2           ---------->DOF2 ---------DOF2 --------->TOE2(3)                    --------->AHL20(2)         <---------AHL20(2)   tctttaaccttaacaaaacttaaaaacttggaagggctcaaaacccatgtcgaatttaataagcccaaaaggcttcaatgtttaataagcccaaaaggct  3627600                                          --------->ZAT2                                       ---------->DOF2                                   <-----------GT1                               <--------ATHB1                               <---------ICU4                               --------->AHL20(2)            ------->GAMYB      <---------AHL20(2)         --------->MYB52(1)    --------->ATHB51     <-------TEIL             <---------ATHB51   --------->YAB1             --------->ICU4                               ------->TEIL ------DOF2<---------MYB52(2) <---------ATHB12    --------->REM1(1) <----------DOF2        ------->TEIL >DAG2--------->YAB1      ------------>CBF--------->At4g35610<---------TOE2(3)   <---------ALFIN1   -   ttcaatgttcataacgaacaagaccaattccaataatttacaaaagctggcttcatcttcttaaacgttgctctatgtatcccaaacccgacgaattttg  3627700                                                                                                   --                                                                                                   <-                                                                                                -----                 <-----------GT1                                                               <-----              <---------ICU4                                              --------->ANAC46  ---------             --------->ICU4                                              ------->GAMYB  --------->DEAR3(1)    <---------ZAT2                                                      <---------MYB52(2)  ------>NtERF2    --------->ZAT2                                                      <---------MYB111(2) <------NtERF2    --------->At4g35610                                                 --------->MYB46(3) --------->DEAR3(1)    <---------At4g35610                             --------->WRKY38(1) <---------MYB55(2)<---------LBD16 <---------At4g35610      *TSS                  --------->LBD16       ----------->RAV1(1)------->GAMYB --------->At4g35610      --------->ARR11(3)   <---------ANAC46   <---------ARR14(2)    --------->ANAC46 -------->MYB52(2)<-----------GT1------>ZmHOX2a(1)--------->REM1(2)<------ZmHOX2a(2) --------->MYB46(3)   gttcgctgctgcataatttttacccatacatcttcctcatcttctctctccgtgttgactcttgaggcgatccaacaaacaacaacaacaacgccgcgat  3627800                                                                                           --------->LBD16                                                                                          --------->ANAC58                                          ----------->GT1                                 --------->ANAC46                                          <------MYB83                              <---------ANAC58                                       <------ZmHOX2a(1)                            <---------ANAC46                                     --------->LBD16                            <---------GLK1(2)                                    <---------HSFB2a(2)                   <---------AHL20(2)       --                                    --------->HSFB2a(2)                  --------->AHL20(2)<------NtERF2      <--------P                    <---------LBD16                   <---------CCA1(1)   --------->ANAC58 ------->HSFB2a(2)        --------->ZAT2  <------MYB46(1)             <---------RVE1(1)  <---------LBD16 --------HSFB2a(2)        <---------At4g35610                        <---------ARR14(2)  --------->ZAT18 ---->GLK1(2)             <---------ZAT2  <---------MYB46(3)         --------->ARR11(3)--------->ARR14(2) ----GLK1(2)            <-----------RAV1(2)                          <---------ARR11(3)<---------ARR14(2) >LBD16--------->MYB111(1)--------->At4g35610                    <---------At4g35610<---------ANAC58   tctcgagggtaagtagtcatacgatttcagctgattttccaggatggtttcaattttgggtttatgcagaagatatttaatagattgtgtgtccgcaatc  3627900                                                               <-----------GT1                                                             <---------YAB1                                                           <---------ICU4                                                           --------->AHL20(2)                     ---                                                           --------->YAB1                         <--                                                           --------->ATHB51                       ---            <------MYB46(1)                                <--------HAHB4                         ---            <------MYB83   <-----------GT1                 -------->ATHB1     ------->TEIL   <------ZmHOX2a(1)           <---------TOE1(2)           --------->GLK1(2)  --------->ICU4<---------MYB46(3)<---------AtLEC2      <---------ANAC46<---------MYB46(3)  <---------YAB1  <---------ATHB12    --------->ARR14(2) ---- -------->DOF2      <---------MYB52(1)<---------GLK1(2)   <---------ATHB51    <---------ARR14(2)-----   tgaaagttgctgctaggtttctgtttgttatacctatttagattctgataggctgtttcaattattaacatgagttgttgaatctggaatttgcaggacc  3628000                                                      <---------ANAC58                                    <---------------AGL15                                    ------>ZmHOX2a(1) <---------ANAC46                                    --------------->AGL15                                   <---------------AGL15                                   --------------->AGL15       --------->ANAC58                            <---------At4g35610       <---------ANAC58   <---------MYB52(1)      ----------->ARR10    <---------ARR14(2)   <-----------HVH21   --------->At4g35610      <---------ARR11(3)          --------->CCA1(2) --->MYB46(1)          <---------At4g35610      --------->ARR14(2)          --------->At4g35610 -------ARR14(2)       <---------ZAT2           --------->ARR11(3)          <---------At4g35610   <-- ------>ARR14(2)       --------->ZAT2         ----------->ARR10--------->ANAC55(2)               <--- --->MYB83        <---------At4g35610     <---------TOE2(3)    --------->ANAC46         <---------ANAC58 ----->WOX13(1)   --------->At4g35610   ---------->DOF2        --------->ANAC58         <---------ANAC58 ---->AtMYB61  ---------->DOF2    ----------------->AGL3      <---------LBD16     <---------LBD16----   aatccgttcagagagattaaagctgagctgagcttctccttataaaggaagatactgcttgttctacggaattttgagagatgcctcgggacttgtcaag  3628100                                                            <------NtERF2                                                            <---------At4g35610                                   --------->ANAC58         --------->At4g35610                                   --------->ANAC58    --------->DAG2                         --------->ANAC46              --------->ANAC58                         --------->O2                  --------->ANAC58        --------->DEAR3(1)  <---------ANAC46          --------->SPL7      <---------At5g28300--------->TGA1a              ---------->DOF2     <---------WRKY38(1) <---------TGA1a           <---------ANAC55(2)    ----------->HVH21    <---------O2              --------->ANAC46   <-----------HVH21     ===================bZIP_DOF <---------MYB52(1) ----ZmHOX2a(2)          ===================bZIP_DOF--------->LBD16        <------ZmHOX2a(1) ------ARR11(3)      <-----------HVH21       <---------ARR11(3)      <-----------RAV1(2) --------->At4g35610 ----->ARR11(3)  <---------ALFIN1---------->DOF2   --------->ANAC55(2)  <------ZmHOX2a(1)<---------At4g35610   atcgaggtcaccgtctccatcaccttcacgtcgtagaaagcactcgaggtctcccgtaaggcagaggcatagcaggaggagtagaagagacagaagccct  3628200  Previous    Next  AGI:  At1g10890.1    Description:  F-box family protein. Identical to F-box protein At1g10890 [Arabidopsis Thaliana] (GB:O04096); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G17200.1); similar to Ribosomal protein S7 [Medicago truncatula] (GB:ABN08288.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 3627726    to: 3632131    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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