Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               ------->GAMYB                          --------->MYB52(1)                                                        <                         <---------WRKY12                                                           -                         <---------WRKY38(1)                                                        <                      --------->ZAT18                                                               -               ---------->DOF2--------->At5g28300                                                ----             <---------------AGL15                                                             <-----            ----------------->AG                                                               <-----            ----------------->AGL1                        --------->ANAC58                     <-----            <-----------------AGL1                        --------->ANAC46                    <------NtERF2 --------DOF2----------------->AG                         --------->ANAC58                  <-------- ----ARR11(3)----------------->AGL1   <---------ALFIN1   ------->TEIL                      <---------At4g35610   ctttgaagaacatttcccaaagaggggacaacggcaaattccacctcgttagaaacatgaacgcaacctttggatgggtctcattcttcatggggctgcg  3626700                       --------->At4g35610                   <-----------HVH21          --------->ZAT2          <---------ZAT2          --------->At4g35610  --------->ATERF1(1)  <---------At4g35610 ------>NtERF2    --------->REM1(1) ---------PCF5    --------->O2                     <---------At4g35610 -------->TCP15(1)--------->bZIP60(2)              --------->At4g35610 ---------PCF2    --------->TGA1a                  <---------ZAT2 -------->TCP20 ----------->RAV1(1)                --------->ZAT2 ----->ALFIN1   <---------ALFIN1                  <---------ARR14(2)      <------ZmHOX2a(1) ----ANAC58  --------->ANAC58                     --------->ARR14(2)    --------->ALFIN1 ----ANAC58  --------->ANAC46                --------->MYB52(1)  <------ZmHOX2a(1) ----ANAC46  --------->ANAC58            <-----------GT1   <------ZmHOX2a(1) <------ZmHOX2a(1) -DEAR3(1)<---------At4g35610          --------->YAB1  <---------ANAC46<------ZmHOX2a(1) <------ZmHOX2a(1)   tggggccatcgctgctcgccacatcagctcttcgtctgcaatattactaccagagctgcgaggagaaggagaaggaggaggagagagggaaggagaagtg  3626800                                                                ----------->GT1                                                               <---------TOE2(3)                                                           <-------GAMYB                                                          --------->MYB52(2)                                                          <------MYB83                                                         <---------AtMYB61                                                        <---------MYB52(1)                                                      <---------ANAC58                                                      <---------ANAC58 --------->ANAC58                                                      <---------ANAC46 --------->ANAC58                ----------->GT1                       --------->ALFIN1--------->DAG2         <------ZmHOX2a(1)                   --------->ATHB12  <---------TOE1(3)  <---------ARR14(2)                        <---------YAB1<------MYB46(1)         ----------->TGA1  --------->ARR14(2)               <------ZmHOX2a(1) <------NtERF2   ---------->DOF2         <------ZmHOX2a(1) <------ZmHOX2a(1)     --------->GLK1(2)    --------->ICU4<---------MYB46(3)    <------ZmHOX2a(1)   agaggatttgaggagagagtgtgataatcttcgacgaggaagagtgatgtttggaggcgttggttaaggtaaaaagcaaggaggatgacgagagaggaga  3626900                                                                                     <----------DOF2                                                                                  --------->ARR11(3)                                                                                  <---------ARR11(3)                                                                           --------->MYB52(2)                                                                         <---------MYB52(1)                    <------NtERF2                                       --------->LBD16                ------->GAMYB                  --------->MYB52(1)      <---------ANAC55(2)             --------->MYB52(1)       <---------ANAC46                 --------->ANAC46  <------ZmHOX2a(1)------>NtERF2    ------->TEIL       <----------DOF2 --------->ANAC55(2)   <-------   cagaggagaagaagacaacggtgccaaggatgtgaatgtatcggagacttatcggttctttcttcgaattcatccgtaagttgagttctttaacaaaggt  3627000                                                                    <-------GAMYB                                                                   <---------ANAC46                                                                <---------ANAC58                                                                <---------ANAC46                              <---------ANAC46                  <---------ANAC58     <---------ANAC46                          <---------ANAC58                  <---------ANAC58         <---------ANAC58         <---------ANAC58 <---------ANAC46                  <---------ANAC46       <---------ANAC46         <---------ANAC58 <---------ANAC58                  <---------ANAC58      *TSS    <----------DOF2    <----------DOF2                 <----------DOF2        ------>ZmHOX2a(1) --TOE2(3)          <-----------GT1                  <-------TEIL  <---------MYB46(3)<---------ANAC58   tgtaatcttttgcttcttcattttcctttcttgtgtctattgattttagtctaggttctttggcttgcgtcgttgaagtcctattttgtgtgtgaataag  3627100                                                    <------------CBF           ----------->RAV1(1)             <---------ZAT18                      --------->ARR11(3)    <---------MYB52(1)       --------->YAB1                        ---------->DOF2        <-----------------AGL1     <-----------TBP                  --------->ALFIN1             <-----------GT1               <---    ------->TEIL                  ---------->DOF2 --------->AHL20(1)<---------At5g28300        ------   tgtatgcatttatagtgcatattaagaacgcgtctccaaagtggtgctaaagtatattgtagaatgagattaccgttttggccacaaaataagcctataa  3627200                                                      --------->AHL20(2)                                                      <---------AHL20(2)                                                     --------->ICU4                                                     <---------YAB1                                                   --------->ATHB51                                                   -------->HAHB4                                                   <--------ATHB1                                                   <--------HAHB4                  ------>ZmHOX2a(2)                                                   --------->YAB1                  ==================                       <---------YAB1              <---------ICU4             <---------WOX13(1)                     --------->YAB1               --------->ICU4           <---------AHL20(2)                    <---------ATHB12              --------->AHL20(2)     --------->ANAC55(2)                  --------->WOX13(1)              <---------ATHB51       <---------ANAC55(2)                 --------->AHL20(2)               <---------YAB1      <------ZmHOX2a(2)        <-----                <---------ATHB12                --------->YAB1        ===============================               --------->ANAC58       --------->ARR11(3)             --------->ARR11(3)     <--------     ---------->DOF2<---------ATHB51  <---------AHL20(1)             <---------ARR11(3)<---------ARR14(2) ------TOE2(3) --------->ANAC58 <----------DOF2<---------YAB1       ======================HOX2a_HOX2a ---->DOF2--------->ZAT18 <---------YAB1     --------->YAB1         <------ZmHOX2a(1)  --------->ARR14(2)   aggaatcgaaagttcacaatcaattatgttgattctttaatatatacttataataattaatagaaaaataggatcatgtaattgatccatatactcagga  3627300                                                        <---------ANAC46                                                        <---------ANAC58                                                        <---------ANAC58                                                   <---------AtLEC2                                                <-------PIF5                                     ----      --------->TOE2(2)                        <---------ANAC58                                  <---      --------->TOE1(2)       <---------ANAC46 <---------ANAC58                                  ---- =HOX2a_HOX2a     ----------->GT1             ------->TEIL                                  <-------- -ZmHOX2a(1)      <---------ANAC46         <---------WOX13(1)                             <---------ANAC46 =HOX2a_HOX2a   <---------ANAC46<---------ANAC46------->PIF5            <---------AtLEC2  ----------- -LBD16      --------->ICU4   <---------bZIP60(2) <-------TEIL         <-------TEIL<---------ANAC46   ttagtaaacctaggcatgatgtgtgaattgtgatgtgtatacatgatggacgtgcatggtgtgagaagaaatgtgcatgggaattgtgggtttagtgaaa  3627400                                                         --------->ICU4                                                         <---------ATHB51  ----------->GT1 ------->GT1------------------------>ANAC81       ----------->GT1         --------->DAG2 <----------- ------ANAC55(2)                             --------->LBD16              <---------TOE2(3) ----->ANAC55(2)---------->DOF2             <---------RAP2.6(2)         ---------->DOF2<-----------GT1 -ZAT6    ----------->GT1                   <---------ANAC46       ----------->GT1  --------->TOE2(3) >GT1     <---------ANAC55(2)              <---------LBD16  <---------ANAC46----------->GT1        <-   cgtgatttagtcaagtgaaaaagaagagaagaagagcatggaatttgcggctatgtaaaattatgggtatgctaaaaaggttaaaatgttaactgttttt  3627500                                                                  --------->DAG2                                                     <---------AHL20(2)     --------->TOE2(3)                               --------->AHL20(2)                         <----     --------->TOE1(3)                              --------->AHL20(2)                      --------- -MYB.PH3(1)          <-----------------------TaNAC69(2)        ---------->DOF2           ---------->DOF2 ---------DOF2 --------->TOE2(3)                    <---------AHL20(2)         <---------AHL20(2)   tctttaaccttaacaaaacttaaaaacttggaagggctcaaaacccatgtcgaatttaataagcccaaaaggcttcaatgtttaataagcccaaaaggct  3627600  Previous    Next  AGI:  At1g10880.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42172.1); contains InterPro domain Protein of unknown function DUF266, plant (InterPro:IPR004949) Range:  from: 3624035    to: 3627082    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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