Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->AHL20(2)              <---------AHL20(2)                               ------->TEIL             --------->AHL20(1)                             <---------YAB1             <---------AHL20(2)                           --------->YAB1             --------->AHL20(2)                          <---------ATHB12  <---------AHL20(1)                                     --------->MYB46(3)  --------->AHL20(1)                                    ------>MYB83  <---------AHL20(2)                                    ------>MYB46(1)  --------->AHL20(2)                                    -------->P --------->AHL20(2)                                    --------->MYB55(1)              ------>ZmHOX2a(1) ------MYB52(2)    <-----------GT1                    <---------MYB46(2)          <----------DOF2 >ANAC46     <---------AHL20(1)                       <---------MYB111(2)      <-----------GT1 >ANAC58 ------>ZmHOX2a(1)        ------>ZmHOX2a(1)   <---------MYB111(1)   --------->TOE2(3) >ANAC58<---------MYB59       <---------ARR11(3)      --------->MYB46(3)    <----------DOF2   ctaataaattcctaatttaataaacacttcaacatcctcgttttagagattgaataccaaccatgaatgttaacacatctttaactttcctctcaaacaa  3611300                 ------>ZmHOX2a(1)                              --------->AHL20(1)                 <---------YAB1                                 --------->AHL20(2)                --------->TOE2(3)                             <---------AHL20(1)             <---------ARR14(2)                               --------->AHL20(1)             --------->ARR14(2)                          --------->AHL20(2)                      ----             <---------ARR11(3)                       ----------->GT1--------->YAB1             -----            <---------CCA1(2)                  --------->AHL20(2) --------->YAB1            ---------       --------->GLK1(2)                <-------TEIL <---------YAB1 <---------YAB1          ---------     --------->MYB46(3)  --------->AHL20(2)    <---------AHL20(2)<---------YAB1       <-------TEIL  <   aaatccaacaatctatatcctcattgtataaataacatgaggtccatattaaaatacgattaaaaatattataaaaaccatgtgaagattcaacaagaaa  3611400                         >>>>>>>>>>AGL24                         --------->YAB1                         --------->ATHB51                         --------->ATHB12                         <---------ICU4                         >>>>>>>>>>AGL22      <------ZmHOX2a(1)  >>>>>>>>>>AGL20     <------MYB83        -------->ATHB1                       ------->GAMYB     ----------->GT1     <--------ATHB1                     ------>MYB46(1)     <------MYB46(1)     <------------ATHB5                 ------>MYB83    --------->MYB59     <---------ATHB51                    --------->At4g35610    ----------->GT1     <---------ATHB12            --------->ANAC46    ----------->GT1   <--------P     --------->At4g35610           <---------ARR14(2)  <---------AHL20(2) ----->DAG2       --------->ZAT2                --------->ARR14(2) <---------AHL20(2) ----->DOF2       <---------At4g35610    ---------->DOF2   --------->MYB52(1)                    ---- >ANAC58     --------->DAG2            --------->ZAT18    --------->AtMYB61                    ------ >ANAC58    ---------->DOF2<---------WOX13(1)  <------ZmHOX2a(1)   --------->AHL20(2)          <----- ---------------AtSPL8  --------->ICU4 <---------ZAT14    --------->MYB46(3)               ------>ZmHOX2a(1)   aagaggtaggaaaaaaaagcagctcaataattggtagagagtgcaaagaggaaccagacaccaactgaataaaattgaaaaacaatgtctctccttactt  3611500                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   <-                            --------->ANAC46                                                  -------                  <---------AHL20(2)                                                        <--------     <---------ATHB12 -------->HAHB4                      --------->ZAT14                   ---------  --------->AHL20(2)  <---------ICU4                    --------->ANAC46                   ----------  <---------AHL20(2) <---------YAB1                   <---------ALFIN1                   <---------At4g35610 --------->AHL20(2)  <---------ATHB51              --------->ANAC46          <---------AHL20(2)    <- <---------AHL20(2)  --------->ICU4               --------->SPL7             --------->AHL20(2)------ ----->AHL20(2)   --------->AHL20(2)       <---------At4g35610      <---------ARR11(3)   <---------ZAT2 --->TOE2(3)      --------->AHL20(1)       --------->At4g35610      --------->ARR11(3)   --------->ZAT2 -----DOF2       --------->AHL20(2)     <---------At4g35610      --------->AHL20(2)      --------->At4g35610   taaataaatcatccctaaaattaattattcccaccatatttcttctgctccataccacacttcaccataaaatctctatataaattttctcagcagcagt  3611600                                                                <----------ID1                                                              <---------ICU4 ------->MYB46(3)                                             --------->YAB1 --------MYB111(1)                                         --------->YAB1             <---------YAB1 --------MYB46(2)                                        ------------>CBF           --------->ATHB51 -----------MYB.PH3(2)                               --------->TOE2(3)              --------->AHL20(2) ---->GT1                                            --------->TOE1(3)       --------->ANAC46 <------ -At4g35610        --------->ARR14(2)                --------->YAB1          <---------ANAC55(2) >At4g35610        ------>MYB46(1)                   --------->AtMYB61       --------->ANAC55(2) ->RAV1(1)<------NtERF2       <---------CCA1(2)     --------->MYB46(3)      <-------TEIL  ---------->ID1 --------MYB111(2) ------>MYB83------->TEIL        -------->P --------->MYB52(1)    <---------AHL20(2) --->At5g28300     <---------ARR14(2)  ---------->DOF2  --------->YAB1 --------->AHL20(2)<-----------GT1   aactaccttggccccaaaacctatctgtctctgaatcttggcaaagtaatagcaaccataacaataacgacaaaaatatacgtgaattatttttctcttt  3611700                                    <-----------TBP                                 <---------AHL20(2)                                <---------AHL20(2)                                --------->AHL20(2)                                <---------AHL20(1)                            <---------AHL20(2)                           <---------YAB1                         <--------HAHB4            <---------YAB1                         --------->ATHB51  --------->ZAT6                         <---------ICU4  --------->YAB1      ------->TEIL              --------->YAB1--------->AHL20(2)   *TSS     <---------YAB1   ----------->HVH21     <---------CCA1(2)  <---------YAB1  <---------YAB1  --------->YAB1    <-----------HVH21    ------ ------>ZmHOX2a(1)      --------->ICU4--------->YAB1  <---------YAB1    <---------ARR11(3)    ------- ----DOF2   ------>ZmHOX2a(1)<---------AHL20(2) <---------YAB1          --------->ARR11(3)    =======   ctccttcgtctctccttcataaacccattattaattttttttataatactactattattcatgaatgcattgaagatgtcacagtgagaacaaaaaaaaa  3611800                          --------->ARR11(3)                          <---------ARR11(3)                       <xxxxxxxxxxxxxxxxsmallRNA(i)                      <---------bZIP60(1)                  ------->MYC3                 --------->O2                                    --------->DAG2                 --------->TGA1a                        <---------GLK1(2)                 <---------TGA1a                        --------->ARR11(3)                 <---------O2                           --------->ARR14(2)                 --------->ANAC46                       <---------ARR14(2)                 --------->ANAC55(2)                    <---------ARR11(3)                 ==============================================bZIP_DOF                 <---------ANAC55(2)                  ----------->ARR10             <----------DOF2                        ---------->DOF2                           <------NtERF2             <-----------HVH21                  <---------HSFB2a(2)    <---------ANAC46      ------>NtERF2             ==============bZIP_DOF             --------->HSFC1(1)     <---------TGA1a       --------    --------->LBD16   --------->bZIP60(1)       --------->HSFB2a(2)  --------->ZAT14         <-------   <---------LBD16<-------MYC3                  <---------HSFC1(1)   <---------ZAT14        <-------- --->DAG2   <---------ANAC58              <---------ARR11(3)    =================bZIP_DOF   <-------- --->DOF2   <---------ANAC58     ------>ZmHOX2a(1)  =============================bZIP_DOF  <---------LBD16 ==========================bZIP_DOF       --------->ARR11(3)    ---------->DOF2  ----------->GT1    -   gttttccaggcatggcttcacgtgatgacatcttcctcgaccaagaacttcgagaaaagatactcagaaagtgaagtgagagagagagaaaatgccgggg  3611900                                                    --------->LBD16                                                   --------->ANAC46                                               <----------DOF2                                              <---------ANAC58                                           --------->GLK1(1)                  --------->ZAT14 <---------AHL20(2)                 --------->HSFB2a(2)   ---------->DOF2--------->ZAT14 --------->AHL20(2)                 <---------HSFB2a(2)  --------->AHL20(2)   <---------ZAT18       < ->LBD16                          --------->MYB52(1)------>NtERF2        <---------At4g35610     <<<< --LBD16                     --------->ZAT18  <---------ANAC58           <---------ZAT14      <<<<<<< -ANAC46                   --------->ZAT18 <---------GLK1(1)        --------->ZAT14        <<<<<<<<<TBF1 -LBD16     <<<<<<<<<TBF1  <---------ZAT18<---------ARR11(3)        <---------ZAT14      <----------- -------->YAB1             --------->ZAT14--------->ARR11(3)   --------->At4g35610    <----------DOF2   aattttaatgcttcttcttctcttcttagtgctcactaccagaagatttctttccgccattaaagagcagagtagagcagagctctcactttcttcttct  3612000                                                                     ----------->GT1                                                                   ---------->DOF2                                                                <---------HSFB2a(2)                                                                --------->HSFB2a(2)                                                               ------>ZmHOX2a(2)                                                              <------ZmHOX2a(2)                                                             --------->ARR11(3)                                                             --------->AGP1                                                             <---------ARR14(2)                                                             --------->ARR14(2)                                                             <---------ARR11(3)                                                             <---------AGP1                     <----------DOF2                         <---------ARR14(3)                     <---------DAG2                          --------->ARR14(3)                 <---- <<<<<<<<TBF1  <----------DOF2             <----------DOF2  <---------CCA1(2)        ---------->DOF2 <<<<<TBF1    <---------DAG2<---------ANAC58               ----------->ARR10    -------->HAHB4 <----- <<TBF1    <-----------GT1  <---------ANAC58         <-----------RAV1(1)        --------->YAB1 <----- -------------ANAC81--------------------->WRI1  --------->YAB1--------->CCA1(2)<---------YAB1  <-----   tcttcttcattttttacctttcccttttttgcttcgatcgagatgctttagcataatggggcagatctggaaagtgacttaataatagaaagtgatggct  3612100                  --------------->AGL15                  <---------------AGL15                  <----------DOF2                               <----------DOF2 ---------->DOF2                 <-----------------AGL3                         <---------------AGL15                 ===============================================================MADS_MADS        --------->ATHB12                                        --------------->AGL15       <-------TEIL                                 --------->ATHB12          <------ZmHOX2a(1)  <------ZmHOX2a(1)     <---------TOE2(3)           <--------HAHB4          <---------TOE2(3) ------DOF2      <-----------------AGL1             <---------ICU4      --------->At4g35610     <---- ----ANAC58      ----------------->AGL2             --------->YAB1      <---------At4g35610 <-------- ----ANAC58      ----------------->AGL3            <---------ATHB12     --------->ZAT2    <---------DAG2 ----ANAC46      <-----------------AGL2          --------->WOX13(1)     <---------ZAT2 <---------ALFIN1   ttgaggagattcatgggatgctttttatggaaactcgatttcgaactgtatcaatcatttctgtttcttttatgagctgaggaaaagagccactctttct  3612200  Previous    Next  AGI:  At1g10850.1    Description:  ATP binding / protein serine/threonine kinase. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT1G60630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15418.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80935.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPr Range:  from: 3611749    to: 3614613    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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