Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->At4g35610                                <---------ZAT2                                <---------At4g35610                              <---------WRKY12              --------->TOE1(3)                              <---------WRKY38(1)           ----------->GT1--------->ZAT6                       --------->AtMYB61    <------ZmHOX2a(1)--------->At5g28300                 ====         <---------AHL20(2) <-----------HVH21               --------->TOE2(3)          --------->DOF5.7(2) -->REM1(1)        --------->MYB46(3)      ----------->GT1 <-----------------------TaNAC69(2)    ----   ctagagagtttttatttatcaaacaccatcggtcagcagaaaacgaggaaaaacacttaaaaccgtaaaatcagggaacactaagaaacgttaccagtcc  3610100                               ------>NtERF2                               --------->ABI4(1)                              <---------ALFIN1                              --------->DEAR3(1)                              --------->DREB2C(2)                              ------->GAMYB                             --------->MYB46(3)                             <------NtERF2                             --------->ATERF1(1)                             --------->ORA47(2)                             --------->DEAR4(2)                            <---------ATERF1(1)                            ------>NtERF2                           --------->DEAR3(1)                           <---------ALFIN1                          --------->MYB46(3)                          --------->ATERF1(1)                         <---------ATERF1(1)                       <------ZmHOX2a(1)                            --------->MYB46(3) --------->ANAC46                       --------->ATERF1(1)                        ------>MYB83         --------->ANAC58                 <---------At4g35610                              ------>MYB46(1)      --------->ANAC55(1)        --------->MYB46(3)<---------ABI4(2)              --------->ARR14(2)            --------->ANAC58   ------>ZmHOX2a(2)  <---------ATERF1(1)            <---------At4g35610              <---------LBD16   ===========================HOX2a_HOX2a            --------->At4g35610 <---------ZAT14   --------->ANAC58 =========HOX2a_HOX2a--------->ALFIN1             ----------->RAV1(2)    --------->ZAT14   --------->ANAC58 -->ZmHOX2a(1)   --------->At4g35610    ------>ZmHOX2a(1)<---------ARR14(2)         --------->MYB46(3)   ttcgatctgaacaactctaagcggaggagccaccgcctcatccttcgatatcgcctgcagaaacgacctagccactgcagaaataaaccacggaagaaac  3610200                --------->GLK1(1)         --------->AHL20(2)                    <-----------GT1    ----------->RAV1(1)                 --------->TOE2(3)                    <---------YAB1   --------->ANAC46            --------->At4g35610                        --------->ICU4          ---   --------->ANAC58 --------->TOE2(3) --------->ICU4                      <---------YAB1<---------MYB46(3)   --------->ANAC58----------->GT1<-------TEIL         ------>ZmHOX2a(1)<------ZmHOX2a(1) <--------P   ttagcacgacatatacagaaatcgtcaataaacagatgcaaatattaattctatgtcctagtgaagaacagagaggatgattatactgactggttgccat  3610300                                                                                                 <---                                                                                               <-----                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                            <--------                                                                                            <------NtERF2                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                           <---------DEAR4(2)                                                                                           <---------RRTF1(1)                                                                                           <---------ERF1                                                                                           <---------RAP2.3(1)                                                                                           <---------ORA47(2)                                                                                           <---------RAP2.6(1)                                                                                           <---------ATERF1(1)                                                                                           ------>NtERF2                                                                                          <---------RAP2.3(2)                                                                                          <---------RAP2.3(3)                                                                                          --------->ATERF1(2)                                                                                          <---------RRTF1(2)                                                                                          <---------ATERF1(2)                                                                                          <---------RRTF1(3)                                                                                          <---------DEAR3(1)                                                                                          --------->DEAR3(1)                                                                                         <------NtERF2                                                                                         <---------ABI4(1)                                                                                         --------->ATERF1(1)                                                                                         --------->RAP2.3(1)                                                                                        <---------ERF1                                                                                        <---------ATERF1(1)                                                                                        --------->LBD16                                                                                        ------>NtERF2                                                                                        <---------RRTF1(1)                                       --------->ARR11(3)                               <---------RAP2.3(1)                                       <---------ARR11(3)                               <---------ORA47(2)                                  <---------WRKY12     --------->At5g28300             <---------DREB2C(2)                                  <---------WRKY38(1)  --------->LBD16                 <---------DEAR3(1)                                 --------->WRKY18(1)  <---------ANAC46                 --------->ATERF1(2)                                <--------ZAP1       ------>NtERF2                      --------->DEAR3(1)                       <---------HSFB2a(1)          --------->LBD16                    <---------ATERF1(2)                       --------->HSFC1(2)          --------->DEAR3(1)                  <---------RAP2.3(3)                       <---------HSFC1(2)    <---------CCA1(2)                         <---------RAP2.3(2)                    ---------->DOF2---------->DOF2 --------->ANAC46                   <---------LBD16            ----------->HVH21 <---------TOE1(2)<---------GLK1(1)           <---------RVE1(1)---------          --------->LBD16    ------>ZmHOX2a(1)------->TEIL    --------->TOE1(3)   <---------At5g28300        <---------LBD16--------->HSFB2a(1)   <---------GLK1(2)--------->TOE2(3)  <-----------GT1 ---- ------>AHL20(2)  <---------ZAT6<-----------HVH21 <---------LBD16--------->MYB52(1) <-----------RAV1(1)   tgaaatagtctccggtgatagtgaaagcttcctaggtcaaagaacttgaatctccgccgtgaaaccctaacgatgtgatatttttactgccggcggcgga  3610400                                                       <---------AHL20(2)                                                     <---------RVE1(1)                                                    <---------ARR14(2)                                                    --------->ARR14(2)                                                    --------->ARR11(3)                                                --------->At4g35610                                                --------->LBD16                                                <---------At4g35610 ------At4g35610                              ------>ZmHOX2a(2) -NtERF2                                      <---------LBD16 -->LBD16                                    <------ZmHOX2a(2)                       <------ZmHOX2a(1) --ANAC46                                   --------->ARR14(2)                      ----------->GT1 --DEAR3(1)                                 --------->GLK1(2)                      ----------->GT1 -ABI4(1)                                   <---------ARR14(2)               <---------ZAT14 >ATERF1(1)     <---------DAG2             <------ZmHOX2a(1)              <---------ANAC46 -LBD16  ---------->DOF2              <---------HSFB2a(2)    ---------->ID1 --------->ALFIN1 -At4g35610  --------->ARR11(3)       --------->HSFB2a(2)   <-----------GT1 <---------REM1(1) >At4g35610  <---------ARR11(3)   <---------ANAC58  <---------GLK1(2)     <---------ANAC58     ------ ----->At4g35610<----------DOF2   <---------ANAC58  <---------ARR11(3)    <---------ANAC58    -------   gatgagtaagagaaagaactttatgtgtttgatagggcttctcgaggatccgcagatttttttttcccttcaatttgggtgtagagaggaaaaaaaaaaa  3610500                                                                                        --------->TCP16(1)                                                       ------>ZmHOX2a(2)           <------ZmHOX2a(1)                                                       ===================================HOX2a_HOX2a                                                   --------->KAN4(1)             <---------TOE2(3)                                                   <---------KAN4(1)            --------->YAB1                        --------->ZAT18           <---------KAN4(2)             <---------ICU4                     *TSS                     --------->HSFB2a(2)            --------->YAB1       --------->At5g28300                 <---------YAB1                   <---------YAB1 <---------ALFIN1      ----------->GT1---------->DOF2      <-----------TBP                ----------------->AGL3 --->DAG2          ---------->DOF2      --------->GLK1(2)                <-----------------AGL3 --->DOF2  <---------YAB1              <---------GLK1(2)             <---------ETT(1)   ------->TEIL   gcgtttcgcagttaaaattgcaaaagagccctaaaatttgagattcttatagaatgatccctaaatgttttccgacctataataaggatggacccagccc  3610600                                                                     <---------AHL20(2)                                                                    <---------AHL20(2)                                                                    --------->AHL20(1)                                                                    <---------AHL20(1)              -                                                                    --------->AHL20(2)           ----                                                    <---------AHL20(1)                           ----                                                    --------->AHL20(1)                           ----                                                    <---------ARR11(3)          --------->PCF2 ------                                               ------>ZmHOX2a(1)--------->AHL20(2)           --------                                              --------->TOE2(3) <---------AHL20(2)      --------->ZAT6       --------->YAB1            <------ZmHOX2a(1)  --------->ARR11(3)          <---------PCF2------- ------->TEIL           ---------->DOF2--------->YAB1          --------->AHL20(2)      --------->ZAT14   atggacctataatgctattctcttgtaaaaggccaggaccataatattcctcaaaatattgaacatttaatttaatagcatgggcccattacactaacca  3610700 ---------->GT1 -->MYB83                                                                                     ------- ---->P                                <---------WRKY12                                      <------- -->MYB46(1)                           <---------WRKY38(1) <---------HSFB2a(2)               <------- ->GAMYB                     <-----------HVH21             --------->HSFB2a(2)         <---------MYB52(1) >P                      --------->MYB52(1)    --------->GLK1(2)  <----------DOF2     --------->LBD16 -->MYB46(3)   ----------->GT1         --------->ZAT18  <----------DOF2             <---------LBD16   actagtcaaaacttagtaagaaaaaacaaacagtcatggagtcaactagaatccaaaacttttagaaactttccctccaaattccatccggtattagggt  3610800                                             --------->TOE2(3)                                             --------->TOE1(3)                                           ------>MYB83                                           ------>MYB46(1)       --------->DAG2                    ------->GAMYB      ---------->DOF2---------->DOF2    --------->MYB46(3) ---->GT1   <------ZmHOX2a(1)         <-----------GT1                              --------->LBD16 --TOE2(3) --------->ZAT18      <----------DOF2   ---------->DOF2                 <---------ANAC55(2) --TOE1(3) <----------ID1      <---------ICU4<----------DOF2--------->ANAC46 <---------ICU4   ttaatcgaaaaagaggactaattcaaagtctaatctttagtaaccaactttaaaaagtctataagacatggtcatttcataagtccgtaagaaaatcaac  3610900                                                                              --------------->AtSPL8                                                              <---------AHL20(1)                                                              --------->AHL20(1)             ----------->GT1                                 --------->AHL20(2)            --------->ANAC46                               ------>MYB46(1)  <---------AHL20(2)            <----------ID1                        --------->TOE2(3)   <---------ANAC55(2)          --------->MYB52(1)                     ----------->GT1      ----------->GT1               -        <---------AHL20(2)       <---------ALFIN1<---------ANAC55(2)  --------->ANAC55(2) <---------AHL20(2)    ------>ZmHOX2a(1)          <<<<<<<<<<<<<<<<<LFY        ------>MYB83    --------->AHL20(2)     ---   aatgtcctaaataaacggcaaaaactagagaatcaccactggtatcaaaaaacgtaaaaccaaatatataaaacgtattaaatgtactatagtttattac  3611000  Previous    Next  AGI:  At1g10840.1    Description:  TIF3H1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H1); translation initiation factor. Identical to Eukaryotic translation initiation factor 3 subunit H (TIF3H1) [Arabidopsis Thaliana] (GB:Q9C5Z2;GB:Q9SAB9); similar to unnamed protein product [Vitis vinifera] (GB:CAO45277.1); contains InterPro domain Mov34-1 (InterPro:IPR003639); contains InterPro domain Mov34/MPN/PAD-1 (InterPro:IPR000555) Range:  from: 3607632    to: 3610521    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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