Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->ALFIN1                                       --------->ATERF1(1)                                      --------->ALFIN1                                     --------->ALFIN1                                    --------->ALFIN1                             --------->ALFIN1                            --------->LBD16                           <---------ANAC46                      --------->ARR14(2)                      <---------ARR14(2)--------->ALFIN1             --------->HSFB2a(1)           <-              <-----------GT1<------NtERF2                       ------->GAMYB                     --              --------->MYB52(1)  --------->ALFIN1            <-----------GT1                  <-----         --------->AHL20(2)<---------LBD16                    --------->MYB52(1)               ------       --------->TOE2(3)  <---------LBD16                <---------AHL20(2)                   -------  <----------DOF2------->GAMYB --------->ALFIN1          --------->AHL20(2)                  <-------   atgtctttaacttaattaacggactattcgcggggggaggggggggggttttgaacttataaattaaccgaaggttttttaaaacttagagattacccgc  3596000                                                                                                 ----                                                                                                 <---                                                                                          <---------AHL20(2)                                                                                        ----------->TBP                                                                                        --------->AHL20(2)                  ------>MYB83                                                          <---------AHL20(2)                  <---------TOE2(2)                                                   <---------AHL20(2)       <---------TOE2(3)  <----------DOF2                                             ----------->TBP --------ARR14(2) <---------TOE1(2)                                                   --------->AHL20(2) ------->ARR14(2) ------>MYB46(1)                                                   ----------->TBP ----LBD16      --------->TOE1(2)                                                 <---------AHL20(2) --->LBD16      --------->TOE2(2)                                         --------->TOE2(3)    ------ -->ANAC46   <-----------GT1                                  <-----------RAV1(1) --------->AHL20(2) --LBD16--------->ANAC55(2)                   --------->AHL20(2) ----------->GT1--------->AHL20(2)   ggtttttctaacgtattacctacgttttcttttgtccataaaaacaaattaacttatgttttatatgtggttttaaacttaaatttatatatatatatgg  3596100                                                                           --------->AHL20(2)                                                                   <---------AHL20(2)                                                                   --------->AHL20(2)                         --------->ZAT6                           --------->AHL20(2)                        <---------ZAT14                       --------->AHL20(2)           <---------ANAC58     --------->ARR11(3) --------->ZAT14                       <---------AHL20(2)      <------------CBF     <---------ARR11(3)----------->RAV1(1)                 <---------AHL20(2)    --------->ANAC46 ---------->DOF2      --------->ANAC46                 <---------DAG2 <---------AHL20(2)   <---------ANAC46 ------->GT1     --------->DAG2                        <----------DOF2--------->AHL20(2)   <---------ANAC58 ------ANAC46   ---------->DOF2                  <---------ICU4  <---------YAB1  --------->ANAC58 ----->GT1   --------->AHL20(2)                  --------->YAB1<---------AHL20(2)--------->ANAC58   tgtaaaagatttcaaataaaaagcacaacactaatttctaaacattttcaaaaatgactttttatttattaaaaaaataaaacacccaaattgccttgtg  3596200                                                             --------->ZAT6                        <-                                                          --------->WOX13(1)                       <-                                                         --------->MYB46(3)                        <-                                                        ------>MYB46(1)                           <--                                                        ------>MYB83                              <--                                                      --------->AtMYB61                           ---                                                   --------->AtMYB61                    <---------At4g35610      <-----------GT1                             --------->MYB46(3)       ---------->DOF2  ---------   ----------->GT1            <------ZmHOX2a(2) --------->ANAC58        --------->YAB1  --------->At4g35610  --------->DAG2             --------->ARR11(3) --------->ANAC46   <---------ATHB12  <---------At4g35610 ---------->DOF2  --------->AHL20(2)            --------->ANAC58 --------->YAB1 <----------DOF2   <--   tcataaagttacaaaatagaataaatagtgggatcatgttttagtctctcacaccaccatccatcactaatcactaataaagctttcttctgctcaaagt  3596300 ------GAMYB                                          ------------>CBF --------ANAC58                            <---------At4g35610      --------->ANAC58               <- --------ANAC58              --------->TOE2(3)     --------->At4g35610 ---------->DOF2            --- ----MYB46(1)           <<<<<<<<<TBF1      --------->ZAT2  --------->YAB1                       <---- -------MYB46(3)  <---------MYB52(1)       --------->At4g35610      --------->ANAC58           ------ ------>MYB55(2)<---------ANAC58           ----------->RAV1(2)---------->DOF2                  <----- ->DOF2         <---------ANAC58           <---------ZAT2 <---------ATHB12                     <----- ----MYB83   ------>ZmHOX2a(1)------>ZmHOX2a(1) <----------DOF2--------->DAG2                  ------   tggttgagccaactccttccgttttcttcttcctcaagactaatcagctgctcttctgcaatgaaaaagcactcaaaggagaacgctctcgctcttcagc  3596400                                                   <---------ZAT2                                                   --------->ZAT2                                                   --------->At4g35610                                                  <---------ARR14(2)                                                  --------->ARR14(2)            <------MYB46(1)                                                 <------NtERF2                  <------MYB83                                                <------NtERF2                  <---------AtMYB61                                                --------->LBD16        <---------ANAC46                                               <---------DEAR3(1)      <---------ANAC58       <---------ETT(2)                      ------>NtERF2             ================MYC_MYB -----ZmHOX2a(1)                          <---------LBD16              <---------ANAC58 ------>At4g35610                        ------>ZmHOX2a(1)             --------->TGA1a -------RAV1(2)                    --------->TOE1(1)            <----------DOF2<---------MYB46(3) --->At4g35610                    ------>ZmHOX2a(1)<---------At4g35610 <---------TGA1a ----At4g35610               ------>ZmHOX2a(1)--------->SPL7    =================bZIP_DOF ----ZAT2                --------->ARR14(2) ------>NtERF2  ------>ZmHOX2a(1) <---------MYB52(1) --->ZAT2                <---------ARR14(2) <---------SPL7 <---------At4g35610<--------P   aggagactctcgaccttgagaaccctgaatcctctcctcgttcctccggccggagctgttcctctgctttctcgcgtctggttggtctccgatgtctcat  3596500                    <-----------ARR10                    <---------ARR14(2)                    --------->GLK1(2)           --------->ZAT2           --------->At4g35610      ------>ZmHOX2a(2)           <---------At4g35610     <------ZmHOX2a(2)           <---------ZAT2         --------->ARR11(3)        ------>ZmHOX2a(1)         <---------ARR11(3)                                   ----------->GT1        ===================================HOX2a_HOX2a                             ----------->HVH21        ==================================HOX2a_HOX2a      ------>ZmHOX2a(2)<---------At4g35610     -  <---------AtMYB61 --------->ARR14(2)                 --------->ETT(2)  ---------->DOF2<-------GAMYB   cgttttggtcctaagctgtgcgattcttctctctgcgatcttctggctattccctcgtcgatcggtgtctgaattcaaagctgatgggacagttaaactc  3596600                                                         ------>ZmHOX2a(2)                        <--                                                       <---------ARR11(3)                         <--                                           <-------TEIL--------->ARR11(3)                        <---                                         --------->ARR14(2)                                   <------                                         <---------ARR14(2)                                   -------                     --------->DAG2  <---------LBD16<---------TOE2(2)                      --------->YAB1     --------->HSFC1(2)       <---------TOE1(3)  <---------ANAC58                         <---------YAB1     <---------At4g35610      <---------TOE2(3)  <---------ANAC46                     --------->ARR14(2)     <---------HSFC1(2)      <---------DOF5.7(2) <---------ANAC58  <---------MYB52(2) <---------ARR14(2) -------->YAB1      ---------->DOF2 <---------ANAC46<---------TOE1(2)                 <---------ZAT14   aatggtaagcttcttacaacaaaaaagttgataacgttttggggatacatttcgtatgatctctcagtaactcaccagggttcttgagtattctgataat  3596700 ---------------AG ---------------AGL1                             --------->ZAT14 --------GT1                                     <---------ZAT14                          ---------->DOF2 ---ICU4    ----------->GT1          <---------DAG2             --------->ZAT14   <---------MYB46(3) -->YAB1   <---------TOE2(3)         <----------DOF2   <---------YAB1      ------>ZmHOX2a(2)   ------   cactgttttggcaaaggttatacagaaattaagagaaccctttttgatcagtttactatgcttcagtttagttttgatctatagttgttgtttaaaggtg  3596800                                                      --------->YAB1               --------->ZAT2                    <---------ARR14(2)               --------->At4g35610               --------->ARR14(2)               <---------At4g35610          --------->AtLEC2         <-------TEIL                   --------->AHL20(2)      <----------DOF2  <----------DOF2                       <---------AHL20(2)     --------->TOE2(3)              <------ --->ALFIN1   --------->GLK1(2)    <---------YAB1<---------GLK1(2)   <---------ZAT6        <---------YAB1   gagactttaagtacagaagctgtctcttgaggcaattctcatttttatgcaaattctcatgacttcctttactgttcgaatttagttcttagtatgatag  3596900  Previous    Next  AGI:  At1g10790.1    Description:  similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT3G56590.2); similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT3G56590.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72838.1) Range:  from: 3596361    to: 3597848    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version