Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                               ------                                                                                               ------                                                                                             <-------                                                                                             <<<<<<<<                                                                                          <------NtERF2                                                                                         --------->LBD16                   <----------DOF2                                       --------->At5g28300 <<<<<<<<             <---------ALFIN1                                         ------->TEIL      --------->RAP2.6(2)             --------->AtMYB61                                     --------->ANAC58     --------->DEAR3(1)            --------->MYB46(3)                                    <-------MYC2          --------->RAP2.3(2)          --------->WOX13(1)                                      ------->MYC3          ----------->RAV1(1)         <---------WRKY12                                         <-------MYC3          ------------>AtMYB77        --------->WRKY18(1)                                    <---------ALFIN1        --------->RAP2.3(1)      --------->ANAC58                   <---------ANAC46   <---------ZAT18           --------->At4g35610      --------->ANAC58      ------>ZmHOX2a(2)         ------->TEIL------->MYC2        <---------At4g35610 -At4g35610 <---------MYB55(2)    <-----------GT1  <---------ATHB12--------->ANAC58  --------->DEAR3(1)   tttttctcaagtcaaccactgcattttggatcgcattaacctgttgtgtttcaatgaacccgtccacacatgcaccgtaatcagacacagccgcagttag  3592000              <------NtERF2             <---------DEAR3(2)             <---------ATERF1(1)                                                            ---------             --------->LBD16                                                                ---------             ------>NtERF2                                                                  ---------             <-----------HVH21                                                            --------->At4g35610            --------->ATERF1(2)                                                           --------->ZAT2            <---------ATERF1(2)                                                          --------->ALFIN1 ---------ANAC58                                                                        ------->PIF4 ---------ANAC55(1)                                                                     ------->MYC3 -------->ANAC55(2)                                                                     <-------MYC3 ---------ANAC55(2)                                                                     ------->MYC2 ---------ANAC58      <---------ANAC55(2)                                               <-------PIF4 ---------ANAC46      --------->ANAC55(2)                                               ------->MYC4 ------TEIL --------->RAP2.6(2)                                       <------NtERF2     <-------MYC4 ------>CCA1(2)  --------->ANAC58                                    ------>NtERF2      ------->PIF5 ----->ARR11(1)  --------->bZIP60(2)                                --------->DEAR3(1)  <-------MYC2 ----->ARR14(2)  --------->ANAC58                                  <------NtERF2----------->GT1   <-- ------ARR14(2)<---------ALFIN1                                    --------->ATERF1(1)  <-------PIF5 --->MYB59  --------->ANAC46                                      <-----------HVH21    <---------ANAC55(2) ----->ARR10--------->DEAR3(1)                    ----------------->AGL1        --------->ANAC55(2) --MYB52(1) <---------DEAR3(1)                <---------ANAC58    <---------ATERF1(1)  --------->ANAC55(2) <MYB2     <---------LBD16           <----------DOF2             --------->ANAC46     ------------>OsbHLH66 <MYB1   --------->DEAR3(1)  ------>ZmHOX2a(1)<---------ANAC58   --------->O2   <---------ANAC55(2)   atacgtgttcatcgccggcacatcacgtttccttatgctctttctcgcgcttgccaaattgtaaaccgcgtcgcccaatgtctcgtaacacgtgctgacc  3592100                                                                                   <----------DOF2                                                                                   ==================                                                                                  <---------ANAC58                                                                             <---------ANAC58                                                                             <---------AtLEC2                                                                             <---------ANAC46                                                                             <---------ANAC58                                                                             --------->ALFIN1                                                                            <-------TEIL                                                                            --------->MYB55(2)                                                                            <---------MYB46(3)                                                                         <---------ANAC58                                                                         <------MYB46(1)                                                                         <------MYB83                                                                         <---------ANAC58                                                                         <---------ANAC46                                                                        --------->MYB46(2)                                                                        --------->MYB52(2)     <---------DOF5.7(2)                                                <---------DEAR3(1)     <---------At5g28300                                            <---------HSFC1(2)    <-----------GT1                                                 <------MYB83  <---------ANAC58 <------MYB83                                                       <------MYB46(1)================== <------MYB46(1)                                                    --------->HSFC1(2)           ---- <---------MYB46(3)  <---------ZAT2         <---------ANAC58        --------->HSFB2a(1)        ------ -->HVH21           ------>MYB83            <---------ANAC46        <---------MYB46(3)         ====== >WRKY38(1)         ------>MYB46(1)<---------ZAT6        ---------->DOF2<---------MYB46(3)     <----- >WRKY12 <---------MYB52(1) <---------RAP2.6(2)          ============================================ -------MYB52(1)------->TEIL<---------ANAC46<---------ANAC58        <---------HSFB2a(1) --------->HSFB2a(2)   gcttggttaccgtttttgaacctagctgtttcggctagagctagtttcgtcttagcctccaaagcttggatggttcggtgcgtggcttttctagggctcg  3592200                                                                                   ------>MYB83       <-----------GT1                                                       --------->WRKY38(1)   <-------MYC3                                                              ----------->HVH21   ------->MYC3                                                            <---------O2  --------->ANAC55(2)                                              <---------ARR14(2)  ================================bZIP_DOF                      --------->ANAC46   ------>MYB46(1)  --------->TGA1a                                             --------->ANAC55(2) --------->ANAC58  --------->ANAC58              --------->CCA1(2)             --------->ANAC58    --------->ANAC46  --------->ANAC58             --------->ARR11(1)             --------->ANAC58    --------->ANAC58  <---------O2                 --------->ARR14(2) --------->ARR11(3)       --------->O2  --------->O2     <------NtERF2<---------GLK1(1) <---------ARR11(3)   ------>NtERF2  <---------ANAC55(2)          <---------ARR14(2) <---------ARR14(2)   --------->LBD16 ===========bZIP_DOF   ---------->DOF2          ----------->ARR10  --------->ARR14(2) ====bZIP_DOF     <---------ORA47(2)    <-----------HVH21     --------->ANAC46<---------WRKY18(1) ------->HVH21    <---------DEAR3(2)   --------->ALFIN1       <---------ANAC55(2)--------->MYB46(3) --->TGA1a       <---------DEAR3(1)    <---------ANAC46   --------->YAB1 ------>NtERF2          <---- =================================bZIP_DOF    <---------At4g35610<---------ATERF1(1)           <----- ----TGA1a      --------->RAP2.6(3) <---------DEAR3(1) --------->YAB1 --------->ANAC46         ------ ====bZIP_DOF   <---------ORA47(1) <---------LBD16--------->ARR14(2) <---------LBD16       ----------   tgacacgtttcaccagaggtcggcacaaagatggatacgcggtgtgagagcagatattgatcatacgcgactccgcgacttgaccagccatgagaaagat  3592300           --------->ARR14(2)           <---------ARR14(2)          <-------GAMYB          --------->At4g35610          <---------At4g35610          --------->ATERF1(1)          <------NtERF2         <---------MYB46(3)        <---------ANAC46       <---------LBD16       <---------At4g35610       --------->ATERF1(1)                                   --------->AHL20(2)       <------NtERF2                                         --------->AHL20(1)      <---------RAP2.6(1)                              <------NtERF2      ------>NtERF2                                    ------>NtERF2      <---------ATERF1(1)                             --------->ANAC58      <---------DEAR4(2)                            --------->SPL7      <---------RRTF1(1)                            --------->ATERF1(1)      <---------ERF1  <---------ZAT2                <---------ATERF1(1)      <---------ORA47(2)                           <---------ATERF1(1)     <---------ATERF1(2)                           <------NtERF2     <---------RRTF1(3)                            --------->PCF2     --------->DEAR3(1)                            ------>NtERF2     <---------RRTF1(2)                           --------->DEAR3(1)     <---------DREB2C(2)                     <-----------HVH21     <---------DEAR3(1)            <---------At4g35610--------->ANAC58     <---------RAP2.3(2)           <---------ZAT2--------->ATERF1(1)     <---------RAP2.6(2)           --------->At4g35610--------->ANAC46     <---------RAP2.3(3)           --------->ZAT2<------NtERF2    <---------ABI4(1) --------->At4g35610   <-----------RAV1(1)    --------->ATERF1(1)          <-----------RAV1(2)--------->PCF5   <---------RAP2.3(1)<---------At4g35610   --------->ALFIN1 <---------AHL20(1)  --------->ANAC46------>NtERF2  =======================RAV  <---------AHL20(2) --ZmHOX2a(2)    ----------->HVH21------->TEIL   <---------RAP2.6(2)             ------->TEIL ----ARR11(3)   --------->LBD16--------->ANAC58 <---------LBD16               --------->ANAC55(2)   < --->ARR11(3)   ------>NtERF2  --------->ANAC58<---------ANAC46         --------->AHL20(2)          - >DOF2<---------RAP2.3(1)      --------->ANAC46<---------bZIP60(2)      <---------AHL20(2)         --   caatacggcggcggatgccgcgactgctgcaaaacgcagctggaatgtgtcgcggcccgccattttattgatatttatttatgtatttgaattgagaaga  3592400                                                                                  <---------ANAC46                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                         <-----------TBP                         <---------ZAT18                                    <---------ANAC55(2)                         <---------ANAC46                                    ----------->GT1                           <---------MYB46(3)                                    --------->ANAC58                         --------->ALFIN1                                    --------->ANAC55(2)                      <---------AtMYB61-------                                    --------->ANAC46                         <---------DEAR3(1)   ---            *TSS                    --------->ANAC58                       <---------MYB46(3) <------        --------->bZIP60(2)----------->GT1                                 <------MYB83    <---------ANAC46   <-----------GT1        <------ZmHOX2a(1)                                <------MYB46(1) <---------ANAC58 ---------ICU4         <-----------RAV1(2)                                <---------AtMYB61<---------ANAC58 -------->YAB1   ------------>CBF <-----------GT1                      <-----------RAV1(1)---------->ID1 ------->ICU4   <-----------GT1--------->WOX13(1)                    <------------CBF<----------DOF2   aattatcaccaggtcatttttcaatgcaggagttaatcacgttatatatagacaagtttttttggttttgaaattgttggtggtgcgcgttttgcgtttt  3592500                                                                <----------DOF2                                                                --------------->AGL15           <---------TOE2(3)                       <---------ARR11(3)        <---------AHL20(2)                   <------ZmHOX2a(1)  <---------------AGL15        --------->AHL20(2)             <----------DOF2   <----------DOF2 -->ARR14(2)                    --------->ARR11(3) --------->ARR11(3)    --------->YAB1         <---- ------->ID1              <---------TOE1(3)<---------TOE2(3) <-----------GT1             <----------DOF2 ---ARR14(2)              <---------TOE2(3)<---------TOE1(3)<---------CCA1(2) <------ZmHOX2a(1)<-----   ctcgttttattttaatgtaatgcaatctgaggtttatcttgttttaaggagattatcttcttttatcttttttaagcataggacaatacttctttgatac  3592600                                             <---------YAB1                                       --------->AHL20(1)                                       <---------AHL20(2)      --------->ANAC46                <---------AHL20(2)   --------->ZAT14               --------->At5g28300              <---------YAB1   <---------ZAT14              ----------->GT1      --------->ZAT6               <---------TOE2(3)   <---------ARR14(2)    --------->YAB1<---------AHL20(1)         <---------AHL20(2)   --------->ARR14(2)   <---------YAB1--------->YAB1<------ZmHOX2a(2)   <---------TOE2(3)   --------- -----ANAC55(2)     <----------DOF2   --------->AHL20(2)          --------->AHL20(2)      --------->ANAC58 --TEIL             <---------DAG2   --------->ICU4<---------ARR11(3)<---------YAB1       --------->ANAC58   ataagtatactccaaaaacaaactttatcataaactgtaattatattctgctagatcactactagtatattattaatgtagattaagaaaacaagaaagc  3592700                                                     <---------ICU4                                                    <---------YAB1                                                 <-------TEIL                        <---------ANAC46     <---------ICU4                 <---------ICU4           --------->YAB1   <---------TOE2(3)   ---------->ID1    <---------YAB1         ------->TEIL <---------ICU4 ->DOF2          --------->ATHB51      --------->YAB1--------->YAB1  <------ZmHOX2a(1)   taattaagaaatgtgtccataatttttcgtttaaaaaacaattgtcataagttcatcataaccatgaatcaggaaacaacaattactcaagagttcaata  3592800                                                                        <---------AHL20(2)                                                                    <---------ICU4                  ---------->DOF2                                   --------->AHL20(2)               --------------->AGL15                                <---------AHL20(2)              ----------------->AGL2                                --------->ATHB51              ----------------->AGL1                            <---------AHL20(2)           --------->DEAR3(1)                              --------->At4g35610          --------->At4g35610                           --------->At4g35610          <---------At4g35610                     <---------YAB1--------->AHL20(2)        <---------GLK1(2)        ---------->CDC5        --------->GLK1(1)  <---------TOE2(3)<---------AHL20(2)     <---------ARR11(3)   taagaaatgctcagcgaccagaaagagaaacagaaatcaaatggctgaaaataagattagcagcaaaaaattatttcattctatatgaacaagatgctcg  3592900  Previous    Next  AGI:  At1g10770.1    Description:  invertase/pectin methylesterase inhibitor family protein. similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT1G60760.1); similar to pectin methylesterase inhibitor [Brassica oleracea var. botrytis] (GB:AAZ20131.1); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 3591634    to: 3592412    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g10780.1    Description:  F-box family protein. Identical to F-box protein At1g10780 [Arabidopsis Thaliana] (GB:Q9SAC4;GB:Q9SGX3); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G67190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24731.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 3592747    to: 3595078    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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