Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->LBD16                                                                   <---------DEAR3(1)                                                                   --------->ALFIN1                                                                  <---------LBD16                                                                 ------->GAMYB                                                                <---------DEAR3(1)                                                                --------->MYB46(3)                                                              --------->MYB52(1)                                                              <---------ATERF1(1)                                                           ------>NtERF2                                                           --------->LBD16                                   --------->WOX13(1)     --------->ANAC46                                  <---------ICU4          <---------ETT(1)                                 <---------YAB1          <---------LBD16                            --------->ANAC55(2)      --------->ARR11(3)      ---------->DOF2       <---------ANAC55(2)      <---------ARR11(3)    --------->ANAC46        --------->ANAC58        <---------RVE1(1)         --------->AHL20(1) -------ARR14(2)            --------->ANAC55(1)     --------->GLK1(1)         <---------AHL20(1) ------>ARR14(2)            --------->ANAC58        <---------GLK1(1)        --------->AHL20(2) ------MYB52(1)             --------->ANAC46        --------->RVE1(1)  --------->At4g35610          - ---GT1    <<<<<<<<<<<<<<<<<LFY  --------->ICU4    --------->ARR11(3)  <---------At4g35610  --------- -WRKY18(1)----------->RAV1(1)   <---------ATHB12  <---------ARR11(3)<------NtERF2         ----------   gtttctccgaaagcgacattggacttaaacaagtaatcattcaacgtctgagagatatctccggcaacggcggagctaaatatataaaacccataaagca  3570400                          ------>NtERF2                          --------->LBD16                     --------->At4g35610                     --------->GLK1(1)                     <---------GLK1(1)                    --------->ARR11(3)                    <-----------ARR10                                <<<<<<<<<TBF1          --------->At4g35610                                <---------ICU4 -------->ZAT18     <---------ARR11(3)                       --------->YAB1 >DAG2    <---------At4g35610                               <---------ATHB12         --------->LBD16 >DOF2 ---------->DOF2  <---------LBD16           --------->ANAC46   XXXXXXXXXXXXXXXXXXXX>MIR838   aatgcacaatagagctcacgaagagctccgcgagttggagagaagtcatcatccacaacttaatcatcttcttcttctacttcttcccccaaaaatcaaa  3570500                      --------->ANAC58                      ----------->GT1                      --------->ANAC58            <---------DAG2                  --------->ALFIN1                    ---------->DOF2               <----------DOF2            --------->LBD16             <---------AHL20(2)              <---------HSFB2a(1)            <---------HSFB2a(2)            --------->YAB1                   --------->HSFB2a(1)            --------->ANAC46            --------->AHL20(2)             <---------GLK1(2)                --------->LBD16        <---------AHL20(2)            ---------->DOF2    ------>ZmHOX2a(1) <---------LBD16       --------->AHL20(2)         <---------TOE2(3)     --------->TOE2(3)  --------->LBD16   aatcggagatttaataaaaatgaaaagcaaaaaatcgaggtaaaggaatctcctttatcctaaaaaatcaaaaactccccggaagaggggagagaaatag  3570600                                                                                                 ----                                                                 --------->HSFC1(2)              ----                                                                 <---------HSFB2a(1)     --------->LBD16                                                                 <---------HSFC1(2)     --------->LBD16                                           <---------TOE2(3)     --------->HSFB2a(1)   --------->LBD16                         ---------->DOF2 ----------->HVH21     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                ---------->DOF2          --------->WRKY12    ----------->GT1          <---------LBD16           <----------DOF2             <----------DOF2 ---------->DOF2            <---------GLK1(1)<-   agaagagagccttctttcaaaagaacataaagaagatgctcctttgacgaaaacccagaaaggaagaaaattcgaaaactttgaatttccccgagaaaat  3570700                                                                                 --------------->AGL15                                                                                 --------->AtMYB61                                                                                 <---------------AGL15                                                                         --------->O2         <-----------HVH21                                             <---------ALFIN1        <---------ANAC58              ----------->RAV1(1)       --------->ARR14(2)        <---------ANAC58            --------->MYB46(3)          ------->TEIL    ----------------->AGL3 ----->MYB52(1)                 <---------YAB1                  <---------ARR14(2) ------>DOF2 <---------CCA1(2)--------->YAB1                   <---------CCA1(2)----------------->AGL2 --------TOE2(3)           <----------DOF2                   *TSS<---------At4g35610   aaaggaaaatgcgtcgtctctctctgtctcttttatcatccaacaaaaaactttgttatccacttgtatctgcccacctctcaccaaaactagaaaacaa  3570800                                                                                                <----                                                                                                -----                                                                                                <----                                                                                               ------                                                                                               ------                                                                                            ---------                                                                                            <--------                                                                                           --------->ICU4                                                                                         --------->YAB1                                              ----------->HVH21                         --------->ICU4                                           <-------MYC3                                 <---------ATHB51                                           ------->MYC3                                 <---------ATHB12                                     --------->ANAC58                               --------->LBD16                                   --------->YAB1      ----------->HVH21           --------->ANAC46                   --------->GLK1(2) --------->ANAC58<---------MYB46(3)            --------->ANAC55(2)                ------------>CBF   <---------ICU4   <---------AtMYB61             <---------LBD16               <-----------GT1    <---------ATHB12  --------->ALFIN1            --------->ARR14(2)            <------------CBF--------->At4g35610     <---------DEAR3(1)          <---------ARR14(2)           --------->DAG2   <---------At4g35610--------->MYB52(1)           --------->LBD16<---------YAB1   aatgagttttcaaaaattgacaatctttgaagctgaatcatgccatgtgtaacggtggtgacctctccctcaaaactccgagtttccgcaataataataa  3570900                                                                                --------->ATHB51                                                                                -------->HAHB4                                                                                --------->ATHB12                                                                                <--------ATHB1                                                                                <---------ICU4                                                                               --------->ICU4                                                                               --------->AHL20(2)                                                                               <---------YAB1                                                        --------->TOE1(3)      <---------ATHB51                                                        --------->TOE2(3)    --------->YAB1                                               <---------ICU4              <---------AHL20(2)                                               --------->YAB1              --------->AHL20(2)                                          --------->AHL20(2)              --------->YAB1                                          --------->AHL20(1)          --------->ICU4 -----AHL20(2)                            <---------AHL20(2)          <---------YAB1 ---->AHL20(1)                     ----------->GT1    <---------ARR11(3) <---------YAB1 -----YAB1                     <---------AHL20(1) <---------ICU4    <---------ICU4 --->YAB1                      --------->AHL20(1)--------->ICU4    --------->ICU4 --->AHL20(2)                  --------->ARR11(3)<---------YAB1    <---------YAB1                   < >YAB1                 <---------LBD16    <---------AHL20(1)    <---------YAB1 <---------AHL20(2) --- -ICU4       --------->ANAC46<---------KAN4(2)--------->ICU4    --------->ICU4<---------AHL20(1) <---   tattgtaatgtctccactaaatttttgggggaatattttgttaataaaataatgaataccttagagatgattattattaaaataattgagggaaactgtg  3571000                                               --------->MYB52(2)                                               <---------MYB46(3)                                ------>ZmHOX2a(2)                         <---------ANAC46  --------->HSFB2a(1)                         --------->At4g35610  <-------TEIL                       --------->ZAT18     <---------HSFB2a(1)                      --------->ALFIN1     <---------HSFC1(2)                    <---------ANAC46       <------MYB46(1)   <---------ANAC58 <---------bZIP60(2)    --------->HSFC1(2)   <---------ANAC58 <---------TGA1a        <------MYB83                  --------->MYB52(1)        --  <------MYB46(1) <---------ZAT14    <------NtERF2                     <---------MYB59   --------->TOE2(3)  <------MYB83  --------->At5g28300 ------>NtERF2               --------->AtMYB61        --------->TOE1(3)  <---------MYB46(3)<---------O2<---------DEAR3(1)          <---------ETT(1)       <---------HSFB2a(2) ---------WOX13(1)--------->ZAT14  <---------DEAR3(1)    --------->ARR14(2)        --------->HSFB2a(2) ------>ATHB12 ----------->GT1--------->ARR14(2)         <---------ARR14(2) ------->GAMYB<---------DAG2 ------YAB1 --------->MYB52(1)<---------ARR14(2)         --------->GLK1(2) <------------AtMYB77    <-   tgattggttgagagaaacggtgaagtgggctggatcggcgctggaaggttcgttcatagaatccgaccaattccctaactgtcttctgtaaccttatcca  3571100                                                                       <------MYB83               --------->ICU4                                          <------MYB46(1)               ----------->GT1                                         --------->ANAC58      <---------YAB1                                                   --------->ANAC58    --------->YAB1                                                    --------->MYB46(2)    <---------ICU4                 <---------ANAC58    <---------------AtSPL8   <---------YAB1                  <---------ANAC58    <---------ICU4<---------MYB55(1)        ------   <---------ATHB12              <-----------GT1       --------------->AtSPL8                  ------ ------->AHL20(2)      --------->YAB1                 --------->ICU4 <--------P <---------ANAC46 --------AHL20(2)  <---------AHL20(2) --------->ARR14(2)            <---------MYB52(1)         <-----   ttttaatcatagttgtaatgtttaatcacacttattttcgtttccacttgttgctaattagtacattatcggtaggcaaattatgtggaatatggataag  3571200                                          <-------MYC3            <---------AHL20(2)     --------->GLK1(1)                    ------->MYC3           --------->AHL20(2)                --     <---------GLK1(1)      <----------DOF2                 <----------DOF2                        <- --->ANAC58         ----------->GT1 ----------->HVH21       <---------DAG2                --------->YAB1 --->ANAC58         --------->YAB1 <--------P        --------->YAB1   <-------TEIL   --------->ANAC55(2) ----ANAC55(2) <---------YAB1     <-------GAMYB<---------MYB46(3)<---------AHL20(2)  <---------ANAC55(2)   taagtggatttctgtttatgaatggtaagactttggggttgacacatgtttgttagcataaacttttttaaattcatatgcttaatcacataacataatc  3571300  Previous    Next  AGI:  At1g10740.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23330.1); similar to Os05g0408300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055523.1); similar to hypothetical protein OsI_019255 [Oryza sativa (indica cultivar-group)] (GB:EAY98022.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42648.1); contains domain SSF53474 (SSF53474); contains domain G3DSA:3.40.50.1820 (G3DSA:3.40.50.1820) Range:  from: 3568170    to: 3570761    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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