Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->GLK1(2)                                                             <---------ARR14(2)   <---------RVE1(1)                                                             <---------GLK1(2)   <---------ARR14(2)                                                             --------->ARR14(2)  --------->ARR14(2)                                                       <---------YAB1            --------->ARR11(3)         --------->ANAC58                             <---------AHL20(2)         <---------GLK1(2)         --------->ANAC58                            <---------ICU4              <---------ARR11(3) --------GLK1(2)    <----------DOF2                 --------->ICU4<-----------HVH21 <---------AHL20(2) ---->DOF2      <------ZmHOX2a(1)        <---------ALFIN1 <---------TOE2(3)  <---------At4g35610-----   agaatttcccaacgctaaggagctttgtttcgccaattgtccccctcttgaataatttttatggattctgtcatttcgaagcagatttttttaaaaaacg  3562600                                   <---------TOE1(3)                                   <---------TOE2(3)                 --------->ARR14(2)    --------->ARR11(3)                         --------->ARR14(2)                          <---------ARR14(2)    <---------ARR11(3)                         <---------ARR14(2)                        <---------ZAT18     <-----------GT1                 <-----------RAV1(1)                   <-----------GT1             <---------TOE2(3)      --------->TOE2(3) <----------TaMYB80          --------->AHL20(2)         --------->TOE2(3) <--- ---->TOE2(3)   ------->TEIL   <----------DOF2      <---------AHL20(2)    <----------DOF2<---------YAB1   ttgataaatctaaatatgtatgttgcatattcgatttaaggttttttatgacatttatttcgattttagtggattcctttacattaatgttacgatattc  3562700                                                              <---------AHL20(2)                                                          <---------AHL20(2)                                                         --------->AHL20(1)                                                         <---------AHL20(1)                                                       <---------AHL20(1)                        ----                                                       --------->AHL20(1)                      ------                                    --------->AHL20(2)--------->AHL20(2)                 <---------At4g35610                             --------->WOX13(1)   --------->AHL20(2)                     --------->At4g35610                  <-----------GT1--------->WOX13(1) --------->AHL20(2)                <---------At5g28300            --------->AHL20(2) --------->MYB46(3)--------->YAB1                      ------------>AtMYB77 ------YAB1 <---------AHL20(2)-------->P        --------->AHL20(2)                   --------->YAB1 -   ttattttctataatttaaattcactgaatatcaaccaattacatttctaaataaaaatatatattttataggtgttagataatccaattacagttgccac  3562800                                                                            --------->AHL20(2)                                                                            --------->AHL20(1)                                                                       --------->AHL20(2)                                                                    ----------->GT1                                                                   ----------->GT1                                         --------->AHL20(2)      ---------->DOF2                                         <---------AHL20(2)    <------ZmHOX2a(1)  <---------AtLEC2                                        --------->AHL20(2)   --------->MYB59<---------AHL20(2) ----->AtMYB61                      <---------ARR11(3)     <<<<<<<<<MYB98 <---------AHL20(1) >NtERF2    --------->AHL20(2)      --------->ARR11(3)   <---------MYB46(3)--------->AHL20(2) -------->AHL20(2)                 --------->YAB1        --------->MYB52(2)<---------AHL20(2)   caaaaaatatggaatttaaaactaaattacaagtatatgatatttaatttggatggggtttgttaggaaaagataaaataatttgcatagttttagtttt  3562900              ------------>CBF              <------ZmHOX2a(2)        ------>MYB83                                     --------->YAB1        --------->MYB52(1)            ---------->DOF2 --------->WOX13(1)        ------>MYB46(1)          ---------->DOF2     *TSS<---------ICU4      ------->GAMYB      <------------CBF           ------------>CBF   --------->WOX13(1)   --------->ATHB12----------->GT1 <---------ATHB12  <---------WRKY38(1)  <---------AHL20(2)           <---------ATHB12     <---------AHL20(2)  <---------WRKY12     --------->AHL20(2)    ---------->DOF2<---------ICU4      ---------->DOF2   tgagtcaaccaaatggatcaatagattaattgagaaaaagaaaagaaaaaagaaatcaatcataatgttttcgaattttttggaaagcttatacgatgga  3563000                       --------->DEAR3(1)                     ------>NtERF2                    --------->DEAR3(1)                   --------->ATERF1(1)                   <------NtERF2                   --------->SPL7                  ------>NtERF2                  <---------ATERF1(1)                 --------->RAP2.3(3)                 --------->At1g77200                 --------->DREB2C(2)                 --------->DEAR3(1)                 ----------->HVH21                --------->ORA47(2)                --------->DEAR3(2)                --------->ERF1                --------->RAP2.3(1)                <------NtERF2                --------->RRTF1(1)                --------->ATERF1(1)               <---------At4g35610               --------->At4g35610               --------->ABI4(1)               <---------ATERF1(1)               ------>NtERF2              --------->RAP2.3(3)              --------->DEAR3(1)              --------->RAP2.3(2)              <---------DEAR3(1)             --------->RAP2.6(1)             --------->ATERF1(1)             <------NtERF2             --------->RRTF1(1)             --------->DEAR4(2)             --------->ORA47(2)             --------->RAP2.3(1)             --------->ERF1            <---------RRTF1(1)                                                                     --            <---------RAP2.3(1)                                                                    <-            <---------ATERF1(1)                                     ------->GAMYB           ---------            ------>NtERF2                                          --------->ANAC46   <---------HSFB2a(2)           <---------bZIP60(2)                                   --------->MYB52(1) --------->HSFB2a(2)           <---------bZIP60(1)                                --------->TOE2(3)     <---------HSFB2a(2)           --------->ANAC46                                --------->ANAC58  --------->ANAC58    <---           --------->bZIP60(1)                             --------->ANAC58  --------->ANAC58   <----         <---------TGA2(2)                               ---------->DOF2--------->ANAC58    ---------        ----------->TGA1------>NtERF2                  --------->ANAC46 --------->ANAC58 --------->ARR14(2)        ----------->HVH21                 ------->GAMYB--------->LBD16---------->DOF2 --------->HSFB2a(2)   atcggagacgatgacgccgccgacgacgacgaagacaacaacaacgacgagaaaaccccgaaagcctcaacggaaagacacgatttctcgagaaacgccg  3563100                                                                                   <---------ANAC46                                         --------->YAB1                            <---------ANAC58                                       <---------TOE2(3)                           <---------ANAC58                                      ============================================bZIP_DOF                                      ---------->DOF2                      <-----------HVH21                                   <-------GAMYB                          --------->ANAC46                                   ===============================================MYC_MYB                                  ----------->GT1                       --------->ANAC58                               --------->ALFIN1                         --------->ANAC58                              ------->PIF5                              --------->O2                              ------->MYC2                              <---------TGA1a <---------ANAC58                              <-------MYC2                              --------->ANAC46<---------ANAC46    <-----------HVH21         <-------PIF5            --------->ARR14(2)--------->TGA1a --------->ALFIN1 <---------MYB52(1)           ------->MYC3  --------->ATHB12            --------->ANAC55(2)       <-- ------->MYB52(2)             <-------MYC3 <---------YAB1   <-----------HVH21     <------------------ --------MYB46(3)            --------->ALFIN1         <---------ARR14(2)============================= >ANAC58<---------LBD16      <---------ANAC58      --------->ANAC55(2)  ============================= ------MYB52(1)  <------ZmHOX2a(1)<---------ANAC46 --------->ANAC46     <---------O2    <---------bZIP60(2) -----SPL7--------->LBD16    <---------ANAC46     <---------LBD16     <---------ALFIN1  <---------ANAC58 >ANAC58--------->At4g35610  <---------ANAC58   ----------->HVH21    ----------->HVH21  <---------REM1(1)   ttcgtttgtcaccggaagaggaggctcaagcgcgtggggttaaagatgatttgacggaacttggtcataccctcacgcgtcaatttcgtggtgtggctaa  3563200                       =====================HOX2a_HOX2a                     <---------ARR14(2)                     --------->ARR14(2)                                                ==============                     <---------ARR11(3)                                                ------>ZmHOX2a(1)                     --------->ARR11(3)                   <---------TOE1(2)            ==============               ----------->HVH21                          <---------TOE2(2)            --------->LBD16             <---------ANAC55(2)                          --------->LBD16             <---------LBD16             ----------->RAV1(2)                         <-----------RAV1(2)         ------>ZmHOX2a(2)             <---------At4g35610                      ------>MYB46(1)              <---------GLK1(2)          <---------MYB52(1)                        --------->AtMYB61              --------->AGP1 ---          --------->DOF5.7(2)                      --------->HSFC1(2)              <---------ARR14(2)         <-------GAMYB ------>ZmHOX2a(2)           <---------HSFB2a(1)             --------->ARR14(2)         <-----------HVH21     <<<<<<<<<TBF1       --------->MYB46(3)------>MYB83  --------->ARR11(3) --------DOF2--------->ANAC55(2)                   --------->HSFB2a(1)             <---------ARR11(3) -----TaNAC69(2)     ------->TEIL                  <---------HSFC1(2)------>MYB46(1)<------ZmHOX2a(2) ========bZIP_DOF <---------WOX13(1) ------>ZmHOX2a(1)------>MYB83--------->MYB46(3)--------->GLK1(2) ================MYC_MYB    <<<<<<<<<TBF1 <------ZmHOX2a(2)     <-----------GT1   <---------At4g35610   ctttctcgctccgttacctgatggatcttcttcttcttcctccgatctatcgaaccatcccaggtttaaccaatctcggtcttcagatcctggattgaat  3563300                              <-------GAMYB                             --------->ALFIN1                             <-----------RAV1(1)                           <---------ANAC46                         <---------ANAC58                         <---------ANAC58                       <---------ARR14(2)               ------>ZmHOX2a(2)                <------NtERF2         <---------At4g35610              <------ZmHOX2a(2)                --------->LBD16        --------->At4g35610             --------->ARR14(2)               <---------ANAC46        --------->ZAT2             <---------ARR14(2)               --------->DEAR3(1)      <---------ZAT2   <---------ANAC58    ------->TEIL          <---------LBD16        <------ZmHOX2a(1)              --   <---------ANAC58 --------->ANAC58       --------->ANAC58  <------MYB46(1)                       -- ====================HOX2a_HOX2a           --------->ANAC46  <------MYB83                       <---- =====================HOX2a_HOX2a          --------->ANAC58 <---------TOE2(3)                   ----- ------>WOX13(1)    --------->ANAC58     --------->CCA1(2)  --------->MYB59             --------->DAG2   caatcgcgttcttcagatcgggacgaatcgtgtgttggaagtgatacgccggagactggaattaggtttaggagctgggatttagaagaaaaattggcag  3563400              <------ZmHOX2a(1)          --------->LBD16         <---------HSFB2a(2)        ------>ZmHOX2a(2)        ==================================HOX2a_HOX2a        <---------LBD16        ===================HOX2a_HOX2a        =============HOX2a_HOX2a     --------->YAB1                                                           <--------P    --------->ICU4                                       >>>>>>>>>TBF1       <-------GAMYB    <---------ATHB12                               >>>>>>>>>TBF1            <---------MYB46(3)    ----------->ARR10              <------ZmHOX2a(1)  >>>>>>>>>TBF1        <---------ANAC46 ------->ANAC58                  ------------------------>ANAC81      ------>ZmHOX2a(2) ------->ANAC58            >>>>>>>>>TBF1         ------------------------>ANAC81 -----At4g35610         >>>>>>>>>TBF1           >>>>>>>>>TBF1        <------ZmHOX2a(2) ---->At4g35610     <------ZmHOX2a(1)    --------->At4g35610>>>>>>>>>TBF1 ------>NtERF2   aaggcaatgatccggaggatgaggaagaagaagaagaggaaacagatgaagaagaagaagaagaagaagagatcgctgcggttgctcttacagacgaagt  3563500  Previous    Next  AGI:  At1g10717.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G27135.1) Range:  from: 3562181    to: 3562555    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g10720.1    Description:  BSD domain-containing protein. similar to BSD domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G49800.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77737.1); contains InterPro domain BSD (InterPro:IPR005607) Range:  from: 3562953    to: 3564760    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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