Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->AHL20(1)            <---------AHL20(2)            --------->AHL20(2)         --------->YAB1     <----------DOF2     --------->AHL20(2) --------->MYB46(3) <---------AHL20(2)   <-----------GT1 ------AHL20(2)    --------->YAB1                                  <---------YAB1 -----AHL20(2)    <---------YAB1                                  --------->AHL20(2) ---->AHL20(2)   --------->AHL20(2)                             <---------RVE1(1) ---->AHL20(1)   --------->AHL20(1)                            <---------GLK1(2) -----AHL20(1) --------->AHL20(1)                              <---------ARR11(3)          <---------MYB46(3) ---->ARR11(3) <---------AHL20(1)                              --------->ARR11(3)    <------ZmHOX2a(1) -----ARR11(3) <---------AHL20(2)                  --------->At4g35610        --------->STY1(2) --->AHL20(2)  --------->AHL20(2)                  <---------At4g35610        <---------STY1(2)    --   tatttgattaaaaataaaatattataaccactttcaacatgttggaacttggaagctaagtagaagatttttatacgagtagctagaggagagttgttgt  3558000                                                                                                   --                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                =====                                                          ---------->DOF2                       <----                                       --------->YAB1     ===========================================         ---------->DOF2            <---------CCA1(2) --------->ANAC58                          -----      ------>NtERF2         <---------DAG2            --------->ANAC46            ----------->GT1 ---     <----------ID1         <----------DOF2           --------->ANAC58       <------ZmHOX2a(1)  ----- ------->ICU4            <-----------GT1       ------>ZmHOX2a(1)        --------->AtLEC2--------->AHL20(2)   catattgaggccaaagagaattgtatttgactttttgtctatcttcatcctcccatacgaaaaagacttgcatcatgcaggagtttgaaaaaaaatagac  3558100      <-------TEIL ---------->AtMYB77 -----O2 ---->ANAC55(2) ---->TGA1a -----TGA1a -----ANAC58 ===========MYC_MYB                                         --------->AHL20(1)                 ------ -----ANAC58                 ---------->ID1           --------->YAB1                           ------ =====bZIP_DOF         --------->ATHB12          <---------AHL20(2)                           <------ ---->ANAC46  --------->ARR11(3)                 --------->AHL20(2)     <---------CCA1(2)     <------ -------->HVH21<------ZmHOX2a(2)                --------->YAB1   <---------ZAT18 <---------AHL20(2) ---->O2      <---------ARR11(3)        <---------CCA1(2)   --------->ARR11(3)   --------->AHL20(2)   gtgacagtttcatgaagatcacaattcatttgtcccaaactcaaatctaattttaatcaaaatatactgggctcaaatctaatttaaataagcccaataa  3558200                                    ------>MYB46(1)                                    ------>MYB83                                              <------                                  <---------MYB59                                        <---------AHL20(1)  <-------TEIL                    <---------MYB46(2)            <---------ANAC58         --------->ARR11(3) --->YAB1             --------->MYB46(3)                 --------->ATHB12                --------->AHL20(1) --->AHL20(2)<------NtERF2       --------->ANAC46       <---------YAB1 <---------ARR14(2)<---------ARR11(3) ---ATHB12 --------->PCF2      <-----------GT1         <---------GLK1(2)               ------->TEIL ---ATHB51<---------PCF2     --------->YAB1 <----------DOF2     <---------ANAC58    <---------ATHB12   tatgttcatttgggccccaatagaaccacaattataccaaactaaactttgaagacagattattgggcttgggaatttgggcccaaatgaatatttttaa  3558300                                        --------->ANAC58                                        --------->ANAC58                                      <---------ALFIN1                                  --------->SPL7                                  ---------->DOF2                                 --------->SPL1(1)                                 <---------SPL1(1)                                --------->LBD16                                <---------SPL1(2)                                <---------SPL7                               <---------ANAC46                               <---------ANAC58  --------->ZAT2               <---------ANAC55(2)  --------->ZAT14              <---------ANAC58  <---------ZAT2              --------------->AtSPL3  --------->At4g35610       ------------------>SPL14                         ----------->GT1       <-  <---------ZAT14       --------->AHL20(2) <---------DAG2    --------->MYB52(1)     ----------->GT1--  <---------At4g35610   ----------->TBP<---------ZAT18     *TSS   ---------->DOF2 ---------->DOF2---- ---AHL20(2)            <---------AHL20(2) <----------DOF2--------->YAB1--------->MYB52(1)      -----   tctgagcagagagcgactatggaaatataaattccgtacagcacgcttttcaaatttcattcgtaacagaaagacaacgaagaaaaaagaaaatttcgaa  3558400                                     ------->GAMYB                              ------>ZmHOX2a(2)                             <---------GLK1(1)          <---------YAB1     --------->GLK1(1)                <------NtERF2                   ------>ZmHOX2a(2)         --------->ARR11(3)  <------ZmHOX2a(2)             <---------LBD16                   <------ZmHOX2a(2)         --------->AHL20(1) <---------ARR11(3)         <---------ARR14(2)                   <--------         <---------AHL20(1) --------->ARR14(2)         --------->ARR14(2)        --------->MYB52(1)         <---------ARR11(3) --------->ARR11(3)     --------->LBD16<---------GLK1(2)         ---------        --------->CCA1(1)   <---------ARR14(2)    --------->DEAR3(1)             <---------At5g28300        --------->RVE1(1) <------NtERF2           <---------ANAC46--------->ARR14(2)   <---------MYB46(3) ----------->GT1         --------->LBD16       ------->GAMYB --------->LBD16    <-----------GT1  <--- ---------ID1           <---------ANAC58       --------->DEAR3(1) <---------ARR14(2)  --------->ALFIN1 --------->GT1          <---------ANAC58      <---------MYB55(2) ====================================HOX2a_HOX2a ----->DAG2             <---------ANAC46      --------->DEAR3(2) <------ZmHOX2a(1)<---------LBD16---- ----->DOF2            <---------LBD16        --------->MYB46(3) ===================================HOX2a_HOX2a   aaggagaaaaatatctttggaagatggcgggatctctaacagcatcaaaccgccgtagaaacgcggaggattcttcagaaatttaccggtggacgatcgg  3558500                                                                                                    -                                                                                                   <-                                                                                            =========                                                                                            ---------                                                                                          --------->ARR14(2)                                                                                       --------->ANAC46                                                                                       --------->ANAC58                                                                                       --------->ANAC55(1)                                                                                       --------->ANAC58                                               --------->HSFB2a(2)                    <---------LBD16         <---------MYB46(3)                 --------->ARR14(2)                    --------->ANAC46<--       <---------MYB52(1)                   <---------ARR14(2)       --------->ZAT18  --------->LBD16 -ARR14(2)  --------->ZAT18         --------->LBD16                  --------->ZAT14 --------->MYB52(1) >ARR14(2)  <---------ZAT18        --------->ANAC46         ---------->DOF2       --------->PCF2  <-- ------ARR14(2)                   <---------LBD16       <---------LBD16    <---------YAB1 <---------ARR14(2) ----->ARR14(2)               ------>ZmHOX2a(1)<---------HSFB2a(2)   <---------ZAT14 <---------ALFIN1   ttttgctcggtttgttcactatccatcttctccttctccgcatccagttctgaaacctctcggaaagagagagcagtatcattcgccccacggaacctgg  3558600      <------NtERF2     ------>NtERF2   --------->ATERF1(1)   <------NtERF2  <---------ORA47(2)  <---------RAP2.3(1) --------->ETT(1) <---------At1g77200 <---------RAP2.3(3) <---------DREB2C(2) <---------DEAR4(1) <---------DEAR3(1) -------->ATERF1(1)        <---------ALFIN1 ----------HVH21   --------->ARR14(2)             <---------ARR14(2)                       ------>ZmHOX2a(1) =========RAV ------------>AtMYB77                --------->ARR14(2)           ------>NtERF2     <--- -->RAV1(2)  ----------->HVH21                 --------->DEAR3(2)    <-----------HVH21    <---------ANAC58 -------MYB46(3) <---------MYB46(3)<---------ETT(2) ------>ZmHOX2a(2)--------->LBD16      <---------ANAC58 ---------RAV1(1)<---------DEAR3(2)--------->ETT(2)<------ZmHOX2a(2)--------->ANAC46---------->DOF2   ctgtcggcgtcttcttcgacggtttctctccacattgtcgacgaattgaaccgatccgatgtgattctatccgtcaaactcggccagaaagtccttgtga  3558700                                                                <------MYB83                                                                <------MYB46(1)                                                               --------->MYB111(1)                                                               <---------MYB46(3)                                                               --------->MYB46(2)                                                               <---------DEAR3(1)                                                               <---------AtMYB61                                                               --------->MYB111(2)                                                              <--------P             --------->TOE1(3)                                                              <---------MYB55(1)     --------->TOE2(3)                                                           <---------TOE1(3)       <---------TOE1(3)                                                           --------->MYB59         <---------TOE2(3)                                                           <---------AtMYB61 <---------MYB46(3)                                <---------AHL20(2)         <---------TOE2(3)<---------AtMYB61                               --------->AHL20(2)    <---------TOE2(2)  --------->HSFB2a(2)       <-----------GT1        <---------YAB1         <---------TOE1(2)  <---------HSFB2a(2) ----GAMYB                <----------DOF2         ------>ZmHOX2a(2)    <---------ANAC46    --------->YAB1   gttggatttttactctctctctctctctctttattatatatagttctatagatcggatgtttaggttggtgtttcgcgatggtttaagcttaatcaaatt  3558800                                         <---------AHL20(2)                                         --------->AHL20(2)                                     ----------->GT1          ------>ZmHOX2a(2)   <-----------TGA1         <------ZmHOX2a(2)    <-----------HVH21                    --------->ZAT6        --------->ARR14(2)   --------->ANAC46                     --------->ZAT18        --------->ARR11(3)   --------->ANAC58                <------ZmHOX2a(1)              <--------        <---------ARR11(3)   --------->ANAC58        --------->ARR14(2)          --------->At4g35610        <---------ARR14(2) <-----------GT1           --------->ARR11(3)          <---------At4g35610<    <---------LBD16  <---------YAB1  <---------ANAC46<---------ARR11(3)       ---------->DOF2      <-   ttgaaatcgggatctatacatttttgattaaacgtcatggtgtttaattgttcaatatctacaggaagaacactacatttcaaagctgaacttcacatgg  3558900  Previous    Next  AGI:  At1g10710.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10717.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16118.1); contains domain PH domain-like (SSF50729) Range:  from: 3558359    to: 3561635    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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