Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <-------TEIL                                               --------->CCA1(2)                    ---------->DOF2                                  --------->ZAT18    <------ZmHOX2a(1)          --------->TOE2(3)                                <---------------AtSPL8    <---------YAB1        --------->TOE1(3)                             <---------ZAT14  <---------GLK1(2)                --------->ZAT6 ------->GT1       --------->GLK1(2)          --------->ARR14(2)              -------->P  ----------- ------ZAT6       <---------GLK1(2)           <---------ARR14(2)           <---------MYB52(2)   -----   agtaaatttagttaagttcagaatctaagactgaagagtactaaaccagattcgaggattacgactagatgaagaaaactaaccctaaaagaaggttata  3550200                                                                             <------NtERF2                                                                          <---------LBD16                                                                         --------->LBD16                                                                        <---------RAP2.6(2)                                                                        <---------DEAR3(1)                                                                       <---------LBD16                                                            ----------->GT1<---------DEAR3(1)                    ----------->GT1                      --------->MYB52(1)<---------ANAC46         <                    <---------ANAC58               <---------AtLEC2    <-------TEIL               <--                    <---------ANAC46        <---------ARR11(3)         --------->SPL7             <-- >GT1               <---------ANAC58  <-----------GT1 --------->YAB1 <-----------HVH21         ------ ----->DOF2  <------ZmHOX2a(2) ----------->GT1 <----------DOF2    --------->HSFB2a(2)          ------   aagagagagagagggatcagagtcgtgaaaacagagttaataactagctctttgaatgaaaacggtttctaggtccggcggagagaagtaatctctagtg  3550300                                                           --------->TCP20                                                           <---------PCF5                                                          ----------->HVH21                                                          <------NtERF2                                                          --------->ATERF1(1)                                                     <---------TGA1a                                                     <---------DEAR3(1)                                                     --------->TGA1a                                                     --------->ANAC58           <---------ZAT14                           --------->ANAC46           <---------ZAT18                           --------->ANAC58           --------->ZAT14                           ======================================MYC_MYB       --------->ARR14(2)                            --------->O2       --------->MYB52(1)                         <---------REM1(2)       <---------ARR14(2)                    ------>NtERF2<---------SPL7     <---------MYB59                         --------->At4g35610    <---------ANAC46                         <---------At4g35610    --------->ANAC58                        <---------DEAR3(1)    <---------ANAC58                        --------->RAP2.3(2)    --------->ANAC55(2)                     --------->DEAR3(1)    --------->ANAC58                       --------->ORA47(2)    <---------ANAC58                       --------->RAP2.3(1)    <---------ANAC55(2)                    <------NtERF2 ------>NtERF2    ===========================================bZIP_DOF  <---------ATERF1(1)    <---------TGA1a                        --------->RRTF1(1)    <---------O2                           --------->ATERF1(1)    --------->O2                           --------->RAP2.6(1)                                  -----    --------->TGA2(1)                     <---------ORA47(2)                            --------->ALFIN1    <---------TGA2(1)                     <---------RRTF1(1)                            --------->STY1(1)    <---------bZIP60(2)                   <---------ERF1<---------ANAC46                <---------STY1(1)    <---------bZIP60(1)                   <---------RAP2.3(1)                          <---------SPL7    =========================MYC_MYB      <---------ATERF1(1)                      --------->DEAR3(1)    --------->bZIP60(1)                   ------>NtERF2<---------LBD16             ------->GAMYB<----   ----------->STF1                      <---------DEAR3(1)<---------PCF2         --------->MYB46(3)=  <---------TGA2(2)                      <---------RRTF1(3)--------->TCP15(1)     --------->DEAR3(2)< ----------->TGA1                        <---------RAP2.3(3)                    --------->ARR14(2)--- ----------->HVH21                  ===========================bZIP_DOF         <---------ARR14(2)<-- -----------HVH21             --------->ANAC46  ----------->HVH21           <---------ANAC46   <----- -------DEAR3(1)     ==========================================MYC_MYB   ----------->TGA1      <----- -------ANAC46       ------->GAMYB  <----------DOF2  <---------O2        ----------->HVH21   <------- ----->HVH21        --------->MYB46(3)   <---------RAP2.3(2)         <---------GLK1(1)--------->DEAR3(1) ----->TGA1--------->ZAT18  <-----------GT1--------->DEAR4(2)        --------->GLK1(1)<---------ANAC46   acggtgacgtaactgcacttcaacgacggtttacgcttctttggcgccgctggacacggcgggacccttggaattctgacggaaaccgccgtaggggtcg  3550400                                                <------MYB46(1)                                         <------NtERF2                                        ------>NtERF2                                        --------->LBD16         ------>ZmHOX2a(2)             <---------LBD16         ===============HOX2a_HOX2a   <---------LBD16       --------->ARR11(3)             <------NtERF2       <---------ARR11(3)            <---------RAP2.3(1)                                  ----------- --------->ZAT18                     ------>NtERF2                                   --------->LBD16 ---->TOE1(2)                       --------->bZIP60(1)                              ------>NtERF2 -----SPL7                          <---------O2----------->GT1                     <---------LBD16 ===============HOX2a_HOX2a         <---------bZIP60(1)                            <---------LBD16 ------ZmHOX2a(1)                ----------->TGA1                        --------->ALFIN1 --------->WRKY38(1) ------>SPL7                     ----------->HVH21                     ============================== -------TOE1(2)                 <-----------HVH21                      <---------TGA1a    --------->WRKY12 ----MYB46(3)                 <------------AtMYB77        <---------ANAC58      <---------GLK1(1) ----ANAC46               --------->At5g28300   <------MYB83           --------->TGA1a <---------DEAR3(1) ----HVH21       ------>ZmHOX2a(1)  <---------bZIP60(2)   <---------ANAC58      --------->GLK1(1)   taggacactgatcttgctcctctgtttcggtaactgtgacgccgggagataggttaatctgcttgagaggggaacgtgagggaattccggcgatgaccca  3550500                                                           --------->ARR14(2)                                                           <---------ARR14(2)                                                           <---------ARR11(3)                      ------->TEIL                         --------->ARR11(3)                      <---------ARR14(2)                  <----------TaMYB80                      <-----------ARR10                   --------->HSFB2a(1)                      --------->ARR14(2)                  <---------HSFB2a(1)              <---------ARR14(2)                          <---------KAN4(1)              <---------GLK1(2)                           <---------GLK1(1)              --------->ARR14(2)      <------MYB83        --------->GLK1(1)            <---------MYB46(3)       --------->ALFIN1     --------->KAN4(1)          <-------GAMYB              <---------AtMYB61<---------RAP2.6(3)         <---------DEAR3(2)          --------->MYB111(2) <---------KAN4(2)         <---------MYB46(3)          --------->MYB55(2)  ---------->TaMYB80        <---------MYB46(3)           <---------MYB46(3)<------NtERF2        <---------At1g77200          --------->MYB111(1)<---------GLK1(2)        <---------DEAR3(1)          <--------P        --------->LBD16        <---------DREB2C(2)    <---------MYB52(1)    --------->ETT(1)      <-----------HVH21        <------NtERF2 <---------AtMYB61   <---------At5g28300<---------ARR11(1) <---------MYB46(3)--------->KAN4(2)  <-----------GT1    <---------CCA1(2)<------MYB46(1)--------->LBD16                        <------ZmHOX2a(1) >HVH21<---------MYB52(1)     ------>NtERF2  ----------->ARR10                            ----------- =================MYC_MYB    --------->DEAR3(1)     <---------LBD16       --------->HSFB2a(2)   ttttttaccgtcggtggattctcgtatctcgccgtcgagttggtggtgaggtttgccggaatatcccatgacttctctcgaatgtgaatgaagaggaaac  3550600                                          <---------YAB1                                          --------->ICU4                                   <---------TOE2(3)                                           <-----              --------->MYB52(1)   <---------YAB1                                             -------     ----------->GT1               <---------AtMYB61                      <---------TOE2(3) <--------   ----------->GT1                 <---------TOE1(3)                   <----------DOF2      ---------  --------->DAG2                 *TSS  <---------MYB46(3)             <---------ANAC58    <---------ANAC46 ---------->DOF2             ---------->ID1                           <---------ANAC58<---------WOX13(1) ------------->ANAC81<------ZmHOX2a(1)<--------P               <---------TOE2(3)     <------------CBF   agagaaagtgaaaaaaaaacagaggagttttgttgttatggttgatgatgaagatgaaagaatcaaaggtttgctttaggtttttgggattgatgtgtgg  3550700                                                              <---------ANAC58                                                              <---------ANAC46                                                              <---------ANAC58                                                             <------NtERF2                                                           <---------DEAR3(1)                                                <-------GAMYBxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) ----ANAC46                                    <---------MYB46(3) -->ALFIN1                                    <---------TOE2(3)                 <---------ANAC46 -ANAC46                            <---------DAG2      <---------AtMYB61    ----------->HVH21 >ALFIN1                            <----------DOF2   <----------DOF2      <---------ANAC46   ggaacgaatgagacgttttgttctctctctcttggatactttttttttgtggttaactttggtggcgagcgaatgtgaagtgaaggggacattttttctt  3550800                                                                                          <---------YAB1                                 --------->TOE2(3)                                      --------->ATHB12                                 --------->TOE1(3)                                      <---------ICU4                                <---------ANAC58                                        --------->ATHB51                                --------->ANAC55(2)                                     -------->ATHB1                                <---------ANAC58                                       <---------ATHB51                                <---------ANAC55(2)                                    <---------AHL20(2)                           <---------ICU4                                              <---------YAB1                          <---------AHL20(2)                                           --------->ICU4                          --------->ICU4                 <------MYB46(1)               --------->AHL20(1)                 --------->At4g35610                     <------MYB83               --------->AHL20(2)                 <---------At4g35610    ------>ZmHOX2a(2)----------->GT1            <---------AHL20(2)               <---------WRKY38(1)<---------MYB52(1)    --------->MYB46(2)         --------->AHL20(2)              <<<<<<<<<WRKY6  <-----------GT1           --------->MYB59            <---------AHL20(2)    ----------->GT1       --------->AHL20(2) <------NtERF2<---------MYB52(1)--------->At4g35610 <------ZmHOX2a(1) ------->GAMYB<---------YAB1        <---------MYB52(1)    <---------At4g35610   agaggacggttttatagtcaacagagtattaattacgttagatcggtgtcgattcagttcggtaatttctactgattttgctgaataaaattattgtaag  3550900                               --------->AHL20(2)                               -------->HAHB4                               --------->YAB1                              <---------YAB1                        <---------AHL20(2)                           <---------AHL20(2)                       --------->AHL20(2)                           --------->AHL20(2)             ------->TEIL                          --------->AHL20(2)              <---------TOE1(2)<-------TEIL          <---                          <---------AHL20(2)          --------------->AtSPL3            <---------MYB52(1)                --------->AHL20(2)  ---------->DOF2   --------------->AtSPL8      <---------AHL20(2)  <----------DOF2         <---------AHL20(1)          <---------------AtSPL8   <---------ICU4    <---  --------------->AGL15   --------->AHL20(1)          <---------------AtSPL3--------->YAB1       ----   ttttctttttataaaaaaaaaaatcaaatttaattatagaaagacagtgagatagagttgtacgttttttttaaatattcatatttattcgttactgatg  3551000                                                                                                 <---                                                                                              <------                                                                                              <------                     ----------->GT1                                                          -------                   <---------ANAC46                                                     --------->AHL20(2)          --------->ZAT18                                              <---------AHL20(2) <---------AHL20(2) ------ANAC58    <---------ZAT14                         ------>ZmHOX2a(1)            --------->ICU4 ------ANAC58<------NtERF2---------->DOF2       ----------->RAV1(1)    --------->AHL20(2)<---------YAB1 ------->RAV1(2)--------->ALFIN1          <---------REM1(1)--------->REM1(1)   --------->HSFB2a(2)   cctgaggctgagggcagagtggagggaataaaggagcatgagagaagtagcaacaattcctacatttcaaaatttaaatttctaggtcatttttatttta  3551100  Previous    Next  AGI:  At1g10690.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G60783.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59885.1) Range:  from: 3549993    to: 3550633    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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