Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                 --------->TGA1a                   XX                                                                 ====================================                                                                 <---------O2          --------->AHL20(2)          <---------YAB1                                         <---------TGA1a       <---------AHL20(2)        --------->YAB1                                           ====================================       <---------YAB1                                    --------->YAB1               --------->AHL20(2)    <---------AHL20(2)                             --------->TOE2(3)                  <---------AHL20(1)    <---------YAB1                               ------->TEIL    --------->O2         <---------AHL20(2) ------->AHL20(1)                    --------->ANAC46    -------->HAHB4    --------->YAB1          -- --------AHL20(1)     --------->YAB1 --------->bZIP60(2)<---------YAB1--------->At4g35610        ----   atattttttattataaattcacaaacatagacattagacacatcacacatgaaacttaataatagacacatgagcaaacatagtccaatttaattcccaa  3545100                                         <-----------GT1                                    <---------YAB1    ---------->DOF2                 --------->AHL20(2)                   <---------YAB1  --------->LBD16                   <---------AHL20(2)                 --------->YAB1            ---- ---------LBD16                    --------->AHL20(2)                <---------TOE2(3)           ---- XXXXXXXXXXXXXXXXXXX>MIR2933A/B    <---------AHL20(1)               ---------->DOF2              ---- =======bZIP_DOF                   --------->AHL20(1)              <---------AHL20(2)          ------ =======bZIP_DOF           <------ZmHOX2a(2)                   --------->AHL20(2)           ------->GAMYB ------->MYB52(1)         --------->ARR11(3)                  <---------YAB1   <----------DOF2<------ ------>DOF2              <---------ARR11(3)  >>>>>>>>>>>>>>>>>LFY --------->AHL20(2)     --------->At4g35610   aaaccggaaagaaaacacacatgaagacgatctaaaatataattttcttcccattgtacatactattatttaaagatgattctttcggtagcaactgaat  3545200             <------ZmHOX2a(2)             --------->CCA1(2)            <---------ARR11(3)            --------->AGP1   <---------ICU4                                                             <---------ANAC58 ----->TOE1(3)            --------->AtMYB61                          <---------RAP2.6(3)  ---------->ID1 ----->YAB1 --------->ARR14(2)                                 --------->At4g35610   <---------MYB52(1) ----->TOE2(3)     --------->ZAT14                          ----------->RAV1(2)     <---------RAP2.6(3) ->TEIL     --------->ARR11(3)                 ----------->GT1 <---------At4g35610---------->ID1 ---GLK1(2) <---------ARR14(2)      <---------ATHB12       ------->TEIL       <---------ANAC58 ------   cttaaacatttcaagatccactataccaccaaaatcaaatcaatagaactcgaaaaacacgagcctgatgccgatatatgacttgccgttttgtctcctc  3545300                                       <-----------GT1                                    <---------GLK1(2)               ------>ZmHOX2a(1)                                    --------->ARR11(3)             --------->TOE2(3)                                    --------->ARR14(2)             --------->TOE1(3)                                    <---------ARR14(2)             --------------->AGL15                                    <---------ARR11(3)             <---------------AGL15                                  ----------->ARR10               <-----------------AGL3                            <---------MYB52(1)                    ----------------->AGL2              --------->ANAC58 <---------ANAC46         ------>ZmHOX2a(1)    <----------DOF2 <---------ANAC58         <-----------RAV1(1)       <---------ARR14(2)      <---------ANAC58 <---------ANAC58      --------->MYB52(1)           --------->ARR14(2)      <---------ANAC58      <-- >ZmHOX2a(1)  --------->ANAC58<---------LBD16    <---------TOE2(3)<-----------------AGL1      <------   cttgcttctcatggccaagctaaacaaactgttggggagattttccaaactgaggttcctctgtctcttccttaaatggctttgtctgcattttttctgc  3545400                               --------->ATHB12                               <---------AHL20(2)                               --------->ATHB51                               --------->AHL20(2)                          <---------YAB1                   <---------AHL20(2)                 <---------RVE1(1)                                      *TSS                  -------                 <---------CCA1(1)        <---------TOE1(3)       ----------->GT1             <------                --------->ARR11(3)        <---------TOE2(3)      <---------MYB46(3)           ------- -------DEAR3(2)<---------ARR11(3)  <------MYB46(1)             <---------ANAC46              <------ -----RAV1(1)   <---------GLK1(2)   <------MYB83              <-----------RAV1(1) ---------->DOF2   cggtttcattcccttgaagattttttttatgaattatttggttcaaggttttgaatttagagatttgtgggtgaaatctctatctaaagaagctaatata  3545500         --------->ALFIN1               ---------->DOF2                               <------MYB46(1)       <---------ANAC46               --------->HSFB2a(2)               <-----------GT1    ------>ZmHOX2a(1) -->ARR11(3)                 <---------YAB1                        <---------ICU4   <---------WOX13(1) ---AHL20(1)            <---------At4g35610 --------->ALFIN1       --------->YAB1 --------->ATHB12 -->AHL20(1)         <------ZmHOX2a(1)<---------HSFB2a(2)          --------->AHL20(2) <------MYB83 ---AHL20(2)   --------->CCA1(2)<---------YAB1                  --------->YAB1   <---------YAB1------   tagagagagatgtgtagatagaaggaggctgattatttttctgaaagtggggagataactattagataataatatcacattctatgattggtcctagtca  3545600                                                                       --------->At4g35610                                                                       <---------At4g35610                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                    <------MYB46(1)                                                   <---------ZAT14  <------MYB83                                                   --------->ZAT14 <---------AtMYB61                                          <---------AHL20(1)       --------->MYB111(2)                                          <---------ARR11(3)       <---------MYB46(3)                                          --------->AHL20(1)       --------->MYB59                 <-                                       <---------AHL20(2)          --------->MYB46(2)   <---------LBD16                    <----------DOF2    --------->AHL20(2)          --------->MYB111(1)  --------->TOE1(2)                    <---------DAG2 --------->HSFB2a(2)    ------>ZmHOX2a(1)            <---------ANAC58        ---------->DOF2    <----------DOF2--------->ARR11(3) ---------->DOF2           <---------ANAC58 --->YAB1        <---------ALFIN1  <---------HSFB2a(2)   --------->TOE2(3)    <---------ICU4     ----   tagttcaactcaaagtttcccactttcttcttttcttctaaaaaaatattcagtttagtccttaaaagtttggtgctgcatcatcgcattcgtgggaaat  3545700                                                                               --------->ZAT14        <---------GLK1(2)                                                      <---------ZAT18        --------->ARR14(2)                              ------->TEIL       <---------ICU4        <---------ARR14(2)  ----------->HVH21  --------->ANAC58            --------->ATHB12      ----------->ARR10    <---------WOX13(1)  --------->ANAC58           ------>ZmHOX2a(1)     <--------P<---------YAB1                  --------->AtLEC2           <---------YAB1   ----------->GT1  <-------GAMYB         <----------DOF2           <------ZmHOX2a(2)   <---------MYB46(3)   <---------YAB1  <---------------AGL15       =============HOX2a_HOX2a        <  --------->ALFIN1 --------->MYB52(2)  <-----------------AGL1      --------->ARR11(3)          ------ --------TOE2(3)   <---------MYB46(3)  ----------------->AGL1      <---------ARR11(3)     --------->At4g35610 ------>DOF2  <---------TOE1(2)      <-----------GT1   <---------CCA1(2) --------->TOE2(3)<---------At4g35610   aaaggtggtagattctcatgtttgttgtgaatgacagttttgccctttcatgcaagtgtatctatttaagatcatcctcattgcacaacttcatctgata  3545800                                                   --------->YAB1                                                  <---------ATHB12                                                 ------>MYB46(1)        <---------AHL20(2)                       ------>MYB83       --------->AHL20(2)            --------->AHL20(1)                                <---------ARR11(3)       <---------AHL20(1)            --------->AHL20(2)                                --------->ARR11(3)       <---------AHL20(2)            <---------AHL20(2)                            ---------->DOF2   <---------AHL20(2)               --------->AHL20(2)                       --------->ARR11(3)   --------->AHL20(2)               <---------AHL20(2)<---------GLK1(2)      --------->ARR14(2) ----------DOF2      <---------AHL20(2)         --------->WOX13(1)           <---------ARR14(2) --->GLK1(1)        --------->AHL20(2)        --------->MYB46(3)             <---------ARR11(3)   ---   tgcttttaattaattttagtcattaaatattaaactaaaaaaattagaaccaatcagaatattacacatagttcaagagggtcttcaaagatgtcttcaa  3545900          <---------ARR11(3)                           <---------AHL20(2)          --------->ARR11(3)                           --------->AHL20(2)      ---------->DOF2                           <---------AHL20(2)  <------MYB46(1)                              <---------AHL20(2)  <------MYB83                 --------->ATHB12--------->AHL20(2)  ----------->GT1        <----------DOF2   --------->AHL20(2)           --------->At4g35610 --------->MYB59 <---------ANAC58          <---------AHL20(2)    <------ZmHOX2a(1) ------>ATHB12   <---------ANAC58        <----------DOF2     --------->TOE1(2)  --------->YAB1   tgtttggttaaagacattttcgtttctctttcttcatttgtgtctttaattaaatattaaaaaactaggaagacatctccatttatcaccaatagagatg  3546000  Previous    Next  AGI:  At1g10682.1    Description:  other RNA Range:  from: 3544992    to: 3545472    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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