Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->AHL20(2)                                                           <----------ID1                                                           ----------->GT1                                                          ------------------------>ANAC81                                                    --------------->AGL15                                                    --------->LBD16                                                    <---------------AGL15                                                   ----------------->AGL3                                                   --------------->AGL15                                                   <-----------------AGL2                                                   <---------------AGL15                                                   ----------------->AGL1                                                   ----------------->AG                                                   ----------------->AGL2                         <--                                              <---------HSFB2a(1)    --------->YAB1              ----                 --------->LBD16              --------->HSFB2a(1)   <---------YAB1             ------         --------->YAB1              --------->AHL20(1)   ----------->GT1                <------ZmHOX2a(1)      --------->ANAC46               <---------AHL20(1)  --------->DAG2                 ----------->GT1      --------->ANAC58        --------->TOE2(3)    <-----------------AG                ----------->GT1 ------->DOF2  ----------------->AGL2--------->ARR11(3) ---------->DOF2          >>>>>>>>>TBF1------- >DOF2--------->ANAC58        --------->TOE1(3)    <-----------------AGL1     -----------------------   caaagaacaagtcataacccagaaacagaaaaccctaaaaatattgcaatcttccccaaaaaggaaaaaaatgataacaagaagaagaagaggaaaataa  3525900                                                                               --------->AHL20(1)                                                                               <---------AHL20(1)                                                                              <---------------AGL15                                                                              <---------AHL20(2)                                                                      ------>ZmHOX2a(1)                                                                    =========================HOX2a_HOX2a                                                                    ------>ZmHOX2a(2)                                                                   <------ZmHOX2a(2)                                                                   ==========================HOX2a_HOX2a                                                                  <---------GLK1(2)       <----------DOF2                                            <---------ARR14(2)       <---------DAG2                                             --------->ARR14(2)      <---------DAG2                                              --------->AGP1   <-----------GT1                                                --------->ARR11(3) -------ICU4                    <---------AHL20(2)                <---------ARR11(3)                < ----->ICU4                    --------->AHL20(2)              --------->HSFC1(1)                 <-- --->YAB1                    <---------ARR11(3)                --------->HSFB2a(2)                --- -->AHL20(2)      --------->GLK1(1)                     <-----------GT1     --------->AHL20(2) ------ ->ANAC81         <---------GLK1(1)        <-----------GT1     <---------HSFB2a(2)    <------ZmHOX2a(1)   aaattatacctttttcagagatttctcacaagatttaatctgatttcacaaactctagtttccttctagatcctgcatatatatattaggaaaacaaaaa  3526000                                                 <---------YAB1                                                <---------AHL20(1)                                              <---------YAB1                                            --------->YAB1                                            -------->HAHB4                                            -------->ATHB1                                            <---------ICU4                                            --------->ATHB51                                            <--------HAHB4                                            <---------AHL20(2)                                           --------->ICU4                                           <---------YAB1                                           <---------ATHB51                                         <---------ICU4 <---------ICU4                          --------->YAB1 --------->YAB1                          <--------HAHB4--------->HSFB2a(2) ---------YAB1          <----------DOF2  --------->ATHB51               ----------->GT1             < -------ICU4            <---------DAG2  <---------ATHB12    ----------->GT1                         < ------>YAB1  ---------->DOF2           --------->ICU4 <---------HSFB2a(2)   <---------TOE2(3)------- --->YAB1 ---------->DOF2    --------->AHL20(2) <---------AHL20(2) ---------->DOF2       <----------ID1   tcatcatcaactaaaagaaagaaatacttttttatatagcccataattattatttttgtagaaagaaaaaaaagaggttaagaaatcgagagagacaaac  3526100           ------>ZmHOX2a(2)          <------ZmHOX2a(2)                                                                         -         --------->GLK1(2)                                                                          -         <-----------ARR10                                                                         <-         --------->ARR14(3)                                                                      ----         <---------ARR11(3)                                                                      ----         --------->ARR11(3)                                                                      ----         <---------AGP1                                                                        ------         <---------ARR14(2)                                                                   <------         --------->ARR14(2)                                                              <---------AHL20(2)         <---------ARR14(3)                                                              --------->AHL20(2)        <------ZmHOX2a(1)---------->DOF2                                   <----------ID1--------->AHL20(1) ---------ATHB12   ----------->GT1                                    >>>>>>>>>TBF1      <---------AHL20(1) ---------YAB1    ----------->GT1                    --------->MYB52(1)  >>>>>>>>>TBF1  --------->AHL20(2) -->MYB52(1) ----------->HVH21                 --------->ICU4      >>>>>>>>>TBF1        <---------ATHB12   cgatgattcaggatcttgacagggaaaaaaagaagaagatgctattgtgaagatgaaacggctatagaagaagaagaagaacaaaacccaataaatttaa  3526200      --------->AHL20(2) -------->RAP2.6(2) ---------->RAV1(1)                                       ---------->DOF2 ---------ID1                                       >>>>>>>>>TBF1                               ----- ----->ANAC58                                 --------->ANAC58                                  ----- ----->ANAC58                               --------->MYB52(1)                                <------ ----->ANAC46                 ---------->DOF2 --------->ANAC58    ---------->DOF2       ------->TEIL ---->DOF2                ---------->DOF2  --------->ARR11(1) ---------->DOF2        <---------WOX13(1) ---AHL20(2)         <----------ID1    ---------->DOF2 >>>>>>>>>TBF1               --------->ATHB12--   agccacaaaaaaatagaaggaagaagacaaaagaaagaggcaaaagaaacggaagaagaagaaagaaagaaaggaaatgaatgaatgatggatgtggtaa  3526300                                                            <-----------GT1                                                      <------NtERF2              --------->ANAC55(2)                                                     <------MYB46(1)             <---------ANAC55(2)                                                    <---------DEAR3(1)         <-----------GT1                                                  <-------GAMYB            <---------YAB1        --------->ZAT18                          <---------ANAC46        -------->ATHB1      <---------PCF2      <---------MYB46(3)     <------MYB46(1)         <---------ICU4 ---->ANAC58             <---------AtMYB61       <------MYB83           <---------AHL20(2) ---->ANAC58--------->ALFIN1                    --------->MYB59         --------->AHL20(2) --P<---------MYB46(3)   --------->ALFIN1      *TSS<--------P           <---------ATHB51            - -------->DOF2     ----------->HVH21 --------->ALFIN1<------MYB83       --------->ICU4            <--   gcaaagcgggtgcgatggagcgggacagtggtggaagaagtgggggaagttgggttggcgattttcgatatgaaattattaatacgttttttttttttga  3526400                                                                                <---------AtMYB61                                                                              <---------MYB46(3)                                                                             <---------MYB46(3)                                                                             <---------AtMYB61                                                                            <---------MYB52(1)                                                                       --------->ARR14(2)                                                                       <---------ARR14(2)                                                                     --------->ANAC58                                                                     --------->ANAC58 <----------DOF2                                                                 ------>MYB46(1)<---------DEAR3(1)                                                                 ------>MYB83<---------DEAR3(1)                                                               <---------MYB111(1)   <---------ANAC58                                                               --------->MYB46(3)    <---------ANAC58                                           <--------P          <---------MYB46(2)<---------MYB46(3)                              <----------ID1                   --------->AtMYB61--------->ALFIN1   --------->YAB1           ----------->GT1<---------WOX13(1) --------->ANAC58--------->MYB52(2) -------->WOX13(1)        ---------->DOF2----------->GT1      --------->ANAC46<------MYB83          < -------ATHB12     <----------DOF2       --------->ATHB12     --------->ANAC58<------MYB46(1)  <-----   atcattcaaaacaaaaaaaaactttgagaaaagaaacaaaaaatggttgatagtaaatgtaaacaccaaacaagaaccgttggtggtgctttctcgtctt  3526500                                            <--------HAHB4                                            --------->ATHB51                                            <---------ICU4                                           <---------YAB1            <---------ANAC46               --------->ICU4        <-------GAMYB                    --------->YAB1       --------->MYB52(2)            <---------DAG2     <---------MYB52(1)           ------>NtERF2   <---------ANAC58           --------->ANAC58   <---------ANAC46           --------->ANAC46                                                      -   <---------ANAC58      --------->YAB1 <---------YAB1                                 <-----------GT1 ----------DOF2       <----------DOF2<----------DOF2  <----------DOF2          <----------DOF2      < -----DOF2<---------ANAC46    --------->ANAC58 <-----------GT1 <------------------------ANAC81     --   ttctttcgtgagttgtgtatttctctttcattacgccaacttttcattattaccttctttttttttgtttttggtttccttcttttttgttacaaatccc  3526600                                                                                                    <                            <---------AHL20(2)      --------->CCA1(2)                               -               <---------WOX13(1)                  --------->ARR11(3)                        <-------             <---------WRKY18(1)     <---------ANAC46            ----------->GT1          -----------   <---------YAB1          <---------AHL20(2)      <---------ARR14(2)                     <---------- -------->AHL20(2)         --------->AHL20(2)      --------->ARR14(2)                    <---------ANAC58 ---------AHL20(2)        <---------AHL20(2)      <------ZmHOX2a(1)<<<<<<<<<<WRKY63      <----------- ------->AHL20(2)        --------->YAB1----------->GT1      --------->ICU4               <---------ANAC58   ataaaattataggtttgactgatactatattaattagagatgtgtaatattaggatatggaaatgaatagtcaaattttgaaaacaattttgcttaatat  3526700 --------->ANAC58                                                                                  <- --------->ANAC58                    --------->ATHB12                                          <----- ---------ZAT18                      <---------ICU4                                            <----- -------->ZAT18                     --------->ICU4                       ----------->GT1       ------ --YAB1 ----------->GT1             <---------YAB1                       <------MYB83       <-------- ---->AGL15              <-----------GT1 --------->YAB1                  <------MYB46(1)   ---------- -----AGL15  <---------ANAC55(2)  --------->YAB1                 <---------ARR14(2)       --------->AHL20(2) ------AGL3  --------->ANAC55(2) <-------TEIL ----------->GT1    --------->ARR14(2)   --------->MYB46(3)   agttcgcaaaacgttacataacaagttttactagattcatcattgatgaagttatattgctaatgcatatatggaaggtatatatacaaccattaaagat  3526800  Previous    Next  AGI:  At1g10650.1    Description:  protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G60610.2); similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G60610.3); similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G60610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66101.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841); contains InterPro domain S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066) Range:  from: 3524019    to: 3526347    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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