Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------AHL20(2)                                                    <---------AHL20(2)                                                 <---------ICU4                                                 <---------AHL20(2)                                                 <--------ATHB1                                                 --------->AHL20(2)                                                 --------->ATHB51                                                --------->ICU4                                                <---------YAB1               --------->MYB59                <---------ICU4          --------->AHL20(2)                  --------->YAB1         <---------At4g35610          <---------AHL20(2)                 <---------YAB1     <----------DOF2         <---------WOX13(1)                  --------->ICU4  --------->ARR11(3)       --------->ATHB12                    --------->YAB1    <---------ARR11(3)     <---------WOX13(1) ---------->DOF2 ----------->GT1---------->DOF2   --------->ATHB12<-------TEIL --------->AHL20(2)  --------->AHL20(2)            ---------->DOF2  <---------YAB1  --------->CCA1(2)   --------->At4g35610 ----------->GT1<----------DOF2   tcatttgattgattaattagatacaaaatagccataaattagctgtaataataatttaaaaggtatctttgagctcttttttggtaaagacatattccaa  3505800                                                                                                <----                                                                            --------->DAG2      -----                                                                     ----------->GT1           <-----                                                                   ---------->DOF2             <-----                                                              --------------->AGL15     <---------ARR11(3)                                                              <----------DOF2       ---------->DOF2                                             ---------->DOF2  <---------------AGL15--------->YAB1                               ----------------->AGL3         =======================================                               ----------------->AGL2    <----------DOF2   ---------->DOF2 <---------                               ===============================================MADS_MADS --------->ARR11(3)   atacctctcttcacatgaaacaagagtacaaaccccaaaaacagaaccaaaggtccaaacttttcttttgaaagtaataaagctatcaaagctctttcct  3505900     --------->AHL20(2)   ----------->GT1  <---------TOE2(3)  <---------TOE1(3) ---------->DOF2 -----------AGL15                                                            --------->YAB1 ---------->AGL15  <------ZmHOX2a(1)                                <-----------RAV1(1)             < ----ANAC58  <---------ZAT14                                      <---------ANAC58           <-------TEIL ----ANAC58  --------->ZAT14              --------->DAG2          <---------ANAC46          --------- ===========MADS_MADS                    ---------->DOF2          <---------ANAC58         --------->ARR14(2) -DOF2   <---------------AtSPL8--------->YAB1   <---------At4g35610 --------->ALFIN1       <---------ARR14(2)   tgttaaagtaaatagtacagaggatgggttttatcagaaaaaaaaaagctagctcatttcatattgttgagtgttgctatcaaaacccatacagatacag  3506000                                                                                             <-------                                                                                             <-------                                                                                             --------                                          <---------YAB1                                    <--------                                         ------->MYC3         --------->WRKY18(1)    <---------ANAC58                                         <-------MYC3     --------->SPL7             <---------ANAC58                              <---------MYB52(1) <----------DOF2   ----------->GT1  --------------->AtSPL8 ----------DOF2     <---------DAG2  --------->ANAC58      --------->ZAT14       <----------DOF2 >CCA1(2)           <----------DOF2 --------->ANAC58    <---------SPL7  <-----------GT1<-----------GT1   tactttgttttgcttcaaatccctttatggccgttttcaagcacatgatagctttcttcgtacagtcaagagtaaaacctctctttttcttaccctatct  3506100                                          <---------ZAT14                                          <-------TEIL                                       <---------ANAC58                                       <---------ANAC58                                  --------->ARR14(2)                                  <---------ARR14(2)                               --------->ANAC58                               --------->ANAC58                               <---------ANAC55(2)                           <-----------HVH21                          ----------->HVH21                           <----------DOF2 ----ARR10        <-----------HVH21   <---------------AtSPL8  <-----------GT1 --ARR14(2)  ----------->HVH21 --------->ANAC55(2)         --------->ARR14(2) ->ARR14(2) <-----------HVH21 <---------LBD16              <---------ARR14(2)          *TSS -CCA1(2)<---------At4g35610----------->HVH21         --------->DEAR3(1)  <----------DOF2    <-------   tctctctctacagatgtcacagtcacctctgtcacggatttgggtacagagactcgcagacgattcactcttctttctttctctctctctgggttttaat  3506200                                                 <---------YAB1                                       --------->KAN4(2)                                      <---------KAN4(1)                        <---------ANAC58      <---------ARR14(2)             <---------ANAC58         <----------TaMYB80             <---------ANAC58        <---------ARR14(2)             <-------GAMYB           ---------->TaMYB80            <---------MYB46(3)       --------->ARR14(2)                                       -------            <------MYB83<---------ANAC58      --------->ARR14(2)                              <------  --------->DAG2        <---------ANAC46    --------->LBD16 >>>>>>>>>WRKY18                  -------- ---------->DOF2 <---------YAB1   ------>ZmHOX2a(2)        ----------->HVH21      <---------AHL20(2) --AHL20(2) <------MYB46(1)      <------ZmHOX2a(2)--------->ATHB12        <----------DOF2    --------   tcaaaaagtgaagttggttaccattgtcttgtacgatcgtatattcccgatatgatttgttttgacagagcaactgctttgtatatatatgccaaatatc  3506300                                                                                           --------->ATHB12                                                      --------->AtMYB61                   <---------YAB1 xxxxxxxxxxxxxxxx>smallRNA(i)                     <------ZmHOX2a(2)                   <---------YAB1 -->ARR11(3)                               ---------->DOF2                         <---------YAB1 ---ARR11(3)                             --------->AtMYB61                    <----------DOF2 ->RVE1(1)                  <---------AHL20(2)   --------->ARR11(3)          <---------ANAC58 ->CCA1(1)                  --------->AHL20(2)   <---------ARR11(3)          <---------ANAC58<-------   tctctctctctccctctctccttgcatcaatttataagtaagaccaaaagagatcaccaaaactcaggcttcttgtttggcttttcttattgttgattga  3506400                                                                             --------->ALFIN1                                                                             <---------DEAR3(1)                                                                      <---------YAB1                                                                   --------->ICU4                                                                   <---------YAB1                                                                 --------->YAB1                                                                --------->ICU4                                                                <---------YAB1                                                             --------->ICU4  <---------AtMYB61                                                           --------->At4g35610               <------ZmHOX2a(1) --WOX13(1)                                                <---------At4g35610<---------MYB46(3)   gagagtgagagtaagagagagagagagagagagagagtgagagagagagagagagagagtgagatgatgatgatgagaggtggtgagagagtgaaggagt  3506500                      --------->ARR14(2)                                     ------->GAMYB                      <---------ARR14(2)                                    <---------ALFIN1                    --------->LBD16                           ------>ZmHOX2a(2)                   --------->HSFB2a(2)                      <---------ARR11(3)                <------                   <---------HSFC1(1)                       --------->ARR11(3)          --------->ARR14(2)                   <---------HSFB2a(2)      --------->HSFB2a(2)     <---------TOE1(2)  <---------MYB52(1)            ---------->ID1                  <---------HSFB2a(2) ------>ZmHOX2a(1)     --------->LBD16        <----------DOF2  --------->TOE1(2) <---------LBD16<---------YAB1<-------TEIL<---------LBD16   ttcttcgaccctttgtcgattccagaacttgggacttatgtgttatctggaaactcggtgatgatccttctaggttcaacacactctccggtttttcttt  3506600                                    <---------ETT(2)                               --------->At4g35610                          --------->ZAT14                               <---------At4g35610                  <----------DOF2                               <---------ZAT2                      <---------MYB52(1)                          --------->YAB1                         <---------ANAC58                       <---------ICU4                            <---------ANAC58        <-------GAMYB  --------->YAB1                       <---------HSFC1(2)              <--------       --------->MYB52(2) <---------ICU4                    --------->HSFB2a(1)             <--------       <---------MYB46(3)<---------YAB1                     --------->HSFC1(2)   --------->ATHB12   - ----DOF2<---------MYB52(1)    --------->ZAT2            ---------->DOF2    <---------ZAT14 <--------   gttatttgttcgttgttcatgtgaatcatcatcagctgtctactattttgtttcagtagcaaagcttccgtttttatgtatactgatgggtttttcgtgt  3506700  Previous    Next  AGI:  At1g10610.1    Description:  DNA binding / transcription factor. similar to AMS (ABORTED MICROSPORES), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G16910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66075.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 3506187    to: 3509007    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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