Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <---------GLK1(2)                                                              --------->ARR14(2)                                                           --------->ANAC46                                                           <---------ANAC55(2)                                                           --------->ANAC55(2)                                                           --------->ANAC58                       ---                                                           --------->ANAC55(1)                   ----                                                           --------->ANAC58              ============                                                          <---------LBD16                <---------ANAC58      --------->ARR11(3)                         --------->HSFB2a(2)                     <---------ANAC46 --------->RAV1(1)               <------ZmHOX2a(2)       <-----------GT1------>ZmHOX2a(2)--------->TGA1a ----->At4g35610                --------->ARR11(3)       --------->MYB52(1)              <---------ANAC58 ->ANAC46      ----------->GT1  <---------ARR11(3)--------->LBD16      <------ZmHOX2a(2) --------->O2 ->ANAC58   ---------->DOF2 ---------->DOF2      <---------HSFB2a(2)  --------->ARR14(2) <---------O2 ->ANAC58 <---------YAB1  --------->ANAC46     ------>ZmHOX2a(2)      <---------ARR14(2) <---------TGA1a   gcaacatagataatgaaagctaaattacacaaaagatcatatactttgatcccagaaattcacggaatctcagatcggagaaatgaaattgacgtgaaga  3503300           <---------MYB52(1)          --------->TOE2(3)                  <---------STY1(2)         <---------DAG2          --------->TOE1(3)                  <---------ZAT2            <----------DOF2        <---------TOE2(3)                    --------->STY1(2)       ------->TEIL  --------->ZAT18                      --------->DAG2             <---------ANAC55(2)  <---------ZAT14                     ---------->DOF2             --------->ANAC55(2)  --------->ZAT14                ----------->GT1                  --------->ANAC58 ------>DAG2                     --------->ANAC58                 --------->ANAC58               ---- ------>DOF2   <------ZmHOX2a(1) --------->ANAC58                --------------->AtSPL3         ----- =======bZIP_DOF          ----------->GT1    --------->ZAT2   <---------MYB52(2)           --------->CCA1(2)   aaagtgtagtaacgttaggaagatggaattgaaacaagaaaaaagctagctagggtttttggaaactcacgtactttttgattttgagagaagagacgac  3503400                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                   <-                            <---------------------WRI1                                             <-                            <------NtERF2                                                         <--                    ------>ZmHOX2a(2)                                                             ---                   <------ZmHOX2a(2)                                                             <---                   --------->CCA1(2)                                                            <----                  --------->ARR11(3)                                                            -----                  --------->ARR14(2)                                                            <----                  --------->AGP1                 <---------DEAR3(1)                  <---------ICU4<-                  <---------AGP1                ------>NtERF2         <<<<<<<ZML2 --------->YAB1-----                  <---------ARR11(3)            <------NtERF2      --------->HSFB2a(2)        -------                  <---------ARR14(2)          <---------DEAR3(1)   <---------HSFB2a(2)   <---------At5g28300      <----------DOF2  --------->ALFIN1      <---------LBD16    --------->ZAT6<---------RVE1(1) <---- -->NtERF2<---------------------WRI1   ---------->DOF2    *TSS<-----------GT1<---------ARR11(3)<----- ---->DEAR3(1)  ----------->ARR10   --------->ANAC46     <----------DOF2     --------->ARR11(3)------   gacgatgactttagcgattagatctgtggaggcgatatacacaaagacgcggcggtcttctttataactctagaactcagatattaatactcaccgtaga  3503500             -------->ABF1             <-------MYC4             ------->MYC3             <-------MYC2             ------->MYC2             ------->MYC4             <-------MYC3            --------->O2            <---------ANAC55(2)            --------->TGA1a         <---------REM1(2)     --------->TOE2(3)    <---------bZIP60(1) <---------MYB52(1) ----------->HVH21 -----------HVH21 -------->LBD16 ------->ANAC55(2) --------ANAC55(1) --------ANAC58 --------ANAC55(2) -----TEIL  <---------O2 --->ZmHOX2a(2) ---ZmHOX2a(2)                                                         <---------TOE2(3) -----AGP1<---------ALFIN1                                             <---------TOE1(3) ---->ARR11(3)           <---------HSFB2a(2)                           <---------YAB1 -----ARR11(3)           --------->HSFB2a(2)  -------->P         <---------AHL20(2) --------ANAC58    --------->ICU4         --------->ZAT6        <---------AHL20(1) ---->ARR14(2)     <---------YAB1    --------->TOE2(3)       --------->AHL20(2)          --------->WRKY45 ---->ARR10 ===========================================MYC_MYB  --------->AHL20(1)     <----------DOF2 -----ARR14(2) <-----------HVH21   <---------YAB1        --------->AHL20(2) <-----------GT1         < ----GLK1(1)<---------TGA1a    <---------ARR11(3)        <---------AHL20(2) <---------WRKY18(1)    -- --->GLK1(1)--------->ANAC55(2)--------->ARR11(3)      <---------AHL20(2) <---------WOX13(1)       <-   tccgtgacctcaacacgtgtcatgtttctgaaacatcttcattaaaactacccttatatttttttatatatttaagattgaccttataactttgactaat  3503600                                                                                <---------DEAR3(1)                                                                                <---------MYB46(3)                                                                               --------->ALFIN1                                                                             <---------TGA1a                                                                             <---------O2                                                                             --------->ZAT2                                                                             <---------bZIP60(2)                                                                             <---------ZAT2                                                                      <---------ZAT14   <---------RVE1(1)                                                        --------->GLK1(1)    <---------ANAC46                                                        <---------GLK1(1)   <---------TOE2(3)                                                        <---------bZIP60(1)<---------ZAT14                                    ------------>CBF    --------->bZIP60(1)--------->ZAT14         <-                               --------->YAB1      ----------->GT1    <-------TEIL      <---------CCA1(1)     <-----------GT1          <---------YAB1   ----------->HVH21      --------->ZAT14  --------->ARR11(3) ---------ICU4        <---------ARR14(2)       --------->ZAT14  --------->MYB52(1)     <---------ARR11(3) ------->ICU4         --------->ARR14(2)       <---------ZAT14 <---------ARR14(2)      <---------GLK1(2) --------YAB1         --------->GLK1(2)    <-----------GT1     --------->ARR14(2)    ----------->ARR10   actgattacaccctctattctccgaatcggttatcaaaaccaatttcactggaccgtgatatcagaaaccggttcactgaggtgggcgagattttttgtt  3503700                                                  --------->HSFC1(2)                                                  <---------HSFC1(2)                                             <------NtERF2                                           <---------ARR14(2)                                           --------->ARR14(2)         ------->GAMYB                                          --------->ATERF1(1)         ===============MYC_MYB            ------>ZmHOX2a(1)             <------ZmHOX2a(1)        <---------DOF5.7(2)              <       ------>ZmHOX2a(1)                --------->ALFIN1--------->At4g35610--------->TGA1a          < ----------GT1           *TSS          <------ZmHOX2a(1)<---------At4g35610--------->O2             <   gtcactctcctctcctcgttcttcgatgctcatccattagaggaggagccgatgtttctgcttccatggtaacgctctcgtctccatctccctcgctctc  3503800                              --------->ANAC55(2)                              <---------O2                     <-----------ARR10                     --------->ARR14(2)                     <---------ARR14(2)                     <---------ARR11(3)                         --------->TOE2(3)                     --------->ARR11(3)                         --------->YAB1                    <---------CCA1(2) <---------TOE1(2)      --------->YAB1              <---------ANAC46<---------TGA1a            ----------->GT1           ----------->HVH21  --------->O2            --------->ARR14(2)      --------->ARR14(2)         <---------ANAC55(2)  --------->TGA1a        <---------SPL7           <---------ARR14(2)         ----------->GT1     <---------TOE1(2)    <---------LBD16         --------->At5g28300 ---------ANAC46 ----------------------->TaNAC69(2)  <---------MYB52(1)<---------At5g28300 ---------ANAC58--------->AtLEC2     <---------LBD16--------->LBD16--------->WOX13(1)  --------->ANAC58 ---------ANAC58----------->GT1     <---------LBD16--------->ANAC46--------->YAB1      --------->ANAC58   ttgcgtagagaacgtgacatgtaaatcttctcacgtttctcgggttctaatctccggtaccgataatattaatcacggtgaatcgtcggaagccaaaata  3503900                                                                                <---------ARR11(3)                                                                               <---------GLK1(1)                                                                               --------->GLK1(1)                                                                           <---------TOE2(3)                                                                           <---------ANAC46                                                                           <---------ANAC55(2)                                                                          <---------LBD16                                                                    <-------TEIL--------->ARR11(3)                                                                <---------TOE1(2)     ---------------                                    <----------DOF2          <------MYB46(1)   <---------CCA1(2)                    <---------ARR11(3)                       <------MYB83--------->MYB52(1)              ----------->GT1--------->ARR11(3)             <---------------AtSPL8 --------------->AGL15           <---------CCA1(2) <---------ARR11(3)             --------->MYB59--------->ANAC55(2)        <-------TEIL--------->ARR11(3)           <---------ZAT14<-------TEIL  <---------ARR14(2)    <---------ARR11(3)     <---------TOE2(3)     --------->ZAT14--------->SPL7--------->ARR14(2)    --------->ARR11(3) <----------DOF2   ------->TEIL       <---------------AtSPL3 <---------------AGL15   ctgagagatgttcatatcgtaagaactttgagatttttctttgaatctcagttctctgtgatttggtacgttcaattacggatatctaatttgagttaat  3504000                                                     XXXXXXXXXXXXXXXXXXXXX>MIR2936                                                   <---------ANAC58                                                   <---------ANAC58                                                  <---------At4g35610                                                  --------->At4g35610                                                  --------->ZAT2                                         --------->GLK1(1)                 <------ZmHOX2a(1)     <---------YAB1                    <------ZmHOX2a(1)        <---------ZAT14     <---------ANAC46       ----------->GT1       <---------ZAT2--------->ZAT18                    <- ------>WRI1             ---------->DOF2 <---------GLK1(1)      --------->ZAT14             <--------   cgttgttgtgtttgtgcttcttagtcagaaaggttattggaggatttcactgagcttgcaagagagaacactgagaaggacctcgagacttgtgggactc  3504100                                                                          <------MYB46(1)                                                                          ----------->GT1                                                                          <------MYB83                                                                          <---------MYB46(3)                                                                  --------->GLK1(2)                >>>>>>>>>ARR2                                     --------->ARR14(2)        <---------ANAC46                                          <---------ARR14(2)   --------->ANAC58        <---------ANAC58  <----------DOF2                         <-----------ARR10    --------->ANAC58     <----------DOF2     <---------ANAC58             <---------ANAC58   <---------DEAR3(1)  ------>NtERF2 >>>>>>>>>ARR1                         <---------ANAC58   --------->ALFIN1 --------At4g35610 ----------------------->TaNAC69(2)<---------MYB46(3)  <---------AtMYB61 -PCF2  <---------ANAC58 <---------ANAC58         <----------DOF2<---------GLK1(2)     <---------TOE2(3)   tcgctgcctttcttgtaagattgttttgctttcttcgcattcaagttgattactttgggtgataagagaatctgggtggtgagaaaatcaaggaaaatgt  3504200  Previous    Next  AGI:  At1g10590.1    Description:  DNA-binding protein-related. similar to DNA-binding protein-related [Arabidopsis thaliana] (TAIR:AT1G23750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66056.1); contains InterPro domain Nucleic acid binding, OB-fold, tRNA/helicase-type; (InterPro:IPR004365); contains InterPro domain Nucleic acid-binding, OB-fold (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold-like (InterPro:IPR016027) Range:  from: 3502005    to: 3503458    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g10600.1    Description:  similar to mov34 family protein [Arabidopsis thaliana] (TAIR:AT1G48790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66068.1); contains InterPro domain Mov34/MPN/PAD-1 (InterPro:IPR000555) Range:  from: 3503725    to: 3505503    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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