Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----         <---------MYB46(3)                                                                   ------>ZmHOX2a(2) ------>ANAC46                 <---------MYB46(3)          <---------AHL20(2)                <------- ------>ANAC58                 --------->MYB52(2)      ----------->GT1                       <------ZmHOX2a(2) -------->GT1                 <---------TOE1(2)    <---------TOE2(3)                        --------- ------>ANAC58               <---------MYB52(1)    <---------TOE1(3)                        --------- --->ARR14(2)       --------->ALFIN1               --------->DAG2                           <--------   acgcaaaatggtgtttgaagcagtggaactcgtttgtttgcaataacagggataaggttgtttaatctagttgaagtcgcaaaatgttgtttgagatctt  3487200                          <---------ANAC58                          <---------ANAC46                          <---------ANAC58 -----DOF2                <---------ANAC55(1) --RVE1(1)    <---------GLK1(1) >ARR11(3)<---------HSFB2a(2) >AGP1    --------->HSFC1(1)                             ------->TEIL         --------->ANAC46 -ARR11(3)--------->HSFB2a(2)    <---------ANAC46  <---------AHL20(2) --------->YAB1   <-----------GT1   tagaattagcatctagaaatctcatatttcgtgtgacttacataaaaacttattttatgtatataagtttaatcaaaactacgtcgttttaatcttttta  3487300                                                                                          ------>ZmHOX2a(2)                                                                                 --------->AHL20(2)                                                                                 <---------AHL20(2)                                            --------->AHL20(2)                  --------->AHL20(2)                               <---------TOE2(3)                             --------->AHL20(2)             <-----------GT1  <-----------GT1      --------->AHL20(2)        <---------AHL20(2)          ----------->GT1 <---------MYB46(3)<---------AHL20(2)              --------->AHL20(2)   agacaataaacaatgttacaaaatttgtttgttaacatttcaaaattttaatataaaatgccaattgagtttatgctataaaattaattcgatcgttttt  3487400                                                                     <---------AHL20(2)                                                                    <---------AHL20(1)                                                                    <---------AHL20(2)                                                                    --------->AHL20(2)                         --------->ANAC58                    ----------->GT1          --------->ZAT18     <---------WOX13(1)  --------->ANAC58   <-----------GT1  <---------MYB46(3)  ---------->DOF2   atgttcgattgattttgaattggaagcatgctattagtctacatataaacttttcaaatgtagttgttaattaatttgaatttgaaagcccacaattcaa  3487500                                                         ----------->GT1                                                      <---------AHL20(2)                                                     <---------AHL20(2)                                                     --------->AHL20(2)                                                     <---------AHL20(1)                                                  <---------------AGL15                                                  --------------->AGL15                                                 <---------YAB1                                                ------------>CBF                                           --------->AHL20(1)                                           --------->AHL20(2)                                           <---------AHL20(1)                                           <---------AHL20(2)                                  *TSS                           <---------ZAT18--------->YAB1<---------TOE2(3)              <---------GLK1(1)                  xxxxxxxxxxxxxxxx>smallRNA(i) <-----------GT1   --------->DAG2       --------->ARR11(3)          --------->MYB52(2)         ------------>CBF--------->AHL20(1)               <---------ARR11(3)        <---------MYB52(1) --------->ZAT18--------->AHL20(2)    ---------->DOF2   ---------->DOF2   ttcgaatttagttagttttgagttggaagcccactatatcgcaattatattacaatttaatgtaaaaaaagcgatgaaaaaccagaaagatttcagaccg  3487600        --------->AHL20(1)        <---------YAB1        <---------AHL20(2)       --------->AHL20(2)       --------->YAB1      <---------AHL20(2) --------->TOE1(3)                            ---------->DOF2 <---------MYB59                          <----------ID1               <---------ZAT14 --------->TOE2(3)                 --------->CCA1(2)          --------->MYB59                --------   aaacctaaataatattgagtaagtttattcgaagaagagatgaagagacaaagagcaatcgagttagatcgagtgaagaagacaatgttgaacatagatt  3487700                                                                          -------->P                                       <------ZmHOX2a(2)                <---------MYB59                                      <---------ARR11(3)                <---------MYB111(1)                            --------->LBD16                           ------->TEIL               ----                           <---------HSFB2a(2)                   <---------ANAC46                ----                           --------->HSFB2a(2)                   --------->O2                    ----                        <---------ARR14(2)                       <---------O2                   -----                       --------->HSFC1(2)                       ------>NtERF2                  ------                       <---------HSFC1(2)                       --------->LBD16                <-----                       <---------HSFB2a(1)                      <------NtERF2                  ------                       --------->HSFB2a(1)                     --------->DEAR3(1)  --------->LBD16---                      --------->HSFB2a(1)                     --------->ATERF1(1)  ------>NtERF2<----                    ==========================HOX2a_HOX2a    --------->LBD16      <---------RAP2.6(2)                    <------ZmHOX2a(1) --------->ARR11(3)     ------>NtERF2------>MYB83        -------               <----------CDC5 <---------ZAT2                <---------At4g35610 <---------LBD16-----       <----------DOF2<---------HSFB2a(1)                   --------->ANAC46  <----------DOF2-------- ->ATHB12    <---------DEAR3(1)--------->ZAT2              <---------LBD16------>MYB46(1)  ------->TEIL   gggacgatgctttgggcgatgaggaagttcccgagctcgagatcatcgctactgacaaaattccgccgcgtgaacctactctttccggctatgaacccgc  3487800      <---------ZAT18 ----->RAP2.3(2) ----->RAP2.3(3) ----->DEAR3(1)                                        <------ZmHOX2a(2) ---->RAP2.3(1)                                <-----------TGA1 >NtERF2                               ----------->RAV1(2) ----ATERF1(1)                         --------->At4g35610 --->LBD16                          <------ZmHOX2a(2) <---------ARR11(3) --->NtERF2                        --------->ARR11(3) --------->ARR11(3) --NtERF2                ------->GAMYB <---------At4g35610 -->ANAC46<------ZmHOX2a(2)        <---------ARR11(3)--------->GLK1(1) ---->DEAR4(2)          <---------MYB52(2)     <-----------HVH21 ->MYB46(3)           --------->MYB52(1) ----------->HVH21                             <----------ARF1   cgtctctgtgcgatccctcagggataacgaactcgacgatcatctgaagcgtcagagatcacttcttactcgtctcggtgataagttggcagacaagggc  3487900               --------->ARR14(2)               --------->GLK1(2)         --------->At4g35610 ------->GAMYB              <---------GLK1(2)    ---------->DOF2          <---------MYB52(2)       --------->LBD16           <---------HSFB2a(2)        --------->MYB46(3)      --------->ANAC46           --------->HSFB2a(2)      --------->MYB52(1)   --------->ARR14(2)           <---------TOE1(1)--------->HSFB2a(1)   <---------ARR14(2)           <---------TOE2(1)<---------HSFB2a(1)                       <---------   --------->GLK1(2)   <---------ZAT2 --------->At4g35610--------->MYB46(3)   ---------->ID1  <---------GLK1(1)    --------->At4g35610     <------ZmHOX2a(1) <---------MYB59<----------DOF2   gagaaaatccgaaacagaatcggagagctcgagtacgagaagcagcgaaggatgttccaacaacggaccaaaatggttttgtcttttttttttttactta  3488000                                                        <---------At4g35610                                           ------>ZmHOX2a(2)             <---------ANAC46                                          <---------GLK1(1)            <---------ZAT14                                         --------->ARR11(3)            --------->ZAT14           ----                             ---------->DOF2            --------->At4g35610                      <--- --GT1            <---------MYB52(1)     <---------ARR11(3)   <---------At4g35610              <-----   ctctgcaattgcatcattctgttactcaaatgaaagtttttgtgatctctgtatttgtagctgaagctaattgttcagtggaatttagagtttgatgatg  3488100  Previous    Next  AGI:  At1g10570.1    Description:  Ulp1 protease family protein. similar to cysteine-type peptidase [Arabidopsis thaliana] (TAIR:AT1G60220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40892.1); contains InterPro domain Peptidase C48, SUMO/Sentrin/Ubl1; (InterPro:IPR003653) Range:  from: 3487595    to: 3491278    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version