Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                  <--                                                  --------->ANAC58                               <---            <---------YAB1                        --------->ANAC58                              -----         --------->GLK1(2)                        --------->ANAC46                           <-------       --------->HSFC1(2)                    ---------->TaMYB80                             <--------       <---------HSFC1(2)                 <---------ANAC46                                 <---------ANAC58       --------->HSFB2a(1)            <----------DOF2                          <<<<<<<<<TBF1<-------GAMYB       <---------HSFB2a(1)        <---------GLK1(1)                  <----------DOF2  --------->TOE1(1)    --------->LBD16               --------->GLK1(1)              ------>ZmHOX2a(1)   ------>ZmHOX2a(1) ------->At4g35610               <---------ARR11(3)        --------->ANAC58 <<<<<<<<<TBF1  <---------ANAC58 --------At4g35610   <-------TEIL--------->ARR11(3)        --------->ANAC58xxxxxxxxxxxxxxxx>smallRNA(i)   tagctccgaaggttctgattacatacagacatgaagatttctttgggtatataagcaaaacaagctcctctctttttcttcttcttcctcgttccgttgc  3431800 ------->P            --------->HSFB2a(2)                                       ------------>CBF -------SPL7     <---------At4g35610                                           --------->ANAC58 ------DAG2      --------->At4g35610                                         --------->At4g35610 ---------->AtSPL3   ----------------->AGL3                                --------->YAB1  <--------- --MYB52(1)   ------>ZmHOX2a(1)                                        ------>ZmHOX2a(1) <---------YAB1 -At4g35610  <---------ALFIN1                                  <------------CBF--------->ANAC58   cttaccctcttccctcctccgcttccaaaatcagcgagagagggagacacatagagagacagagagattgctcctaatcagaagcaatctcaccattgaa  3431900                                                                                            ---------                                                                                      <---------WRKY38(1)                                                                                    -----------------                                                                                    ------>NtERF2                                                                                   ------>NtERF2                                                                                   <---------ATERF1(1)                                                                                   --------->RAP2.6(2)                                                                                  --------->DEAR3(1)                                                                                  <---------DEAR3(1)                                                                                  <---------ATERF1(2)                                                                                  --------->ATERF1(2)                                <----------DOF2                                  --------->ATERF1(1)                               <---------ANAC58                                 ------>NtERF2                          <----------DOF2                                       --------->LBD16                     --------->HSFB2a(1)                                        <---------ATERF1(1) <                     <---------At4g35610                                        <---------RAP2.3(1) <                     <---------HSFC1(2)                                        <---------DEAR3(1)   -                     <---------HSFB2a(1)             --------->LBD16          <---------LBD16     ---                     --------->HSFC1(2)             <---------ANAC46 <----------DOF2<------NtERF2 --- ---CBF       ---------->DOF2  <---------ANAC58  <-----------GT1     --------->TOE2(3)<---------WRKY12   tcatctattttctaccaaaaggaagcttcttttgcttttcattttgccaagtttccgtctaaatctctctactttaaaactccggcggccaacgtttcca  3432000       ------>NtERF2                                                              <---------ETT(2)    ------>ZmHOX2a(1)                                                  <---------ANAC55(2)   --------->TOE1(2)                                                   <---------ANAC58 <------ZmHOX2a(2)                                                     <---------ANAC58 >ARR14(2)   <----------DOF2                                           <---------ANAC46 <---------TOE2(3) ------>TaNAC69(2)                                            <---------MYB52(1)  --------->ETT(2) ---------ARR14(2)                                        <---------At5g28300  --------->LBD16 ---------GLK1(2)                                        <-----------GT1     ------>ZmHOX2a(2) -------->ARR14(2)                                --------->ARR11(3)   --------->ANAC55(2) ------>DEAR3(1)       <-------TEIL              --------->At4g35610   <---------O2 <---------REM1(2) ------>MYB46(3)  --------->LBD16  ---------->DOF2<---------ARR11(3)   <---------ANAC55(1)         --   ccgatcctccgacttctttccgagtttcatcttctaacaaaggaacgaagaagctctcttcaccgtttgagtaacgtgatccggtctacaaaggttttaa  3432100                                                                        <---------ANAC58                                                                 <------ZmHOX2a(2)                                                                <---------ARR11(3)                                                                >>>>>>>>>GATA-2                                                                --------->ARR11(3)                                                                >>>>>>>>>GATA-3                                                                >>>>>>>>>GATA-4                                                                >>>>>>>>>GATA-1    --------->RVE1(1)                                          --------->GLK1(1)         --------->LBD16   <---------ARR11(3)                                   <---------At4g35610    <---------WRKY38(1)   --------->GLK1(2)                             <---------GLK1(2)------>ZmHOX2a(2)  --------->GLK1(2)   --------->ARR11(3)    ------>ZmHOX2a(1)       --------->ARR11(3)     <---------ANAC58<---------ANAC58  <---------GLK1(2)  <-----------GT1             <---------ARR11(3)     <---------ANAC46<---------ANAC58 ------->YAB1   <---------GLK1(2)              <---------TOE2(3)--------->AGP1 <---------WRKY12   atcaaaatctcttgctcagaatttttcctcgttttttgtgatttctcttaagattttccgatgagagatctattacttgggacaacgattccgagctatt  3432200                                                                                     --------->LBD16                                                                                    <---------ANAC46                                                                                   --------->At4g35610                                                                                   <---------LBD16                                                                          <---------GLK1(1)                    --------->ANAC46    <---------ANAC58                  --------->GLK1(1)                   <---------LBD16      <---------ANAC58               --------->LBD16                   --------->LBD16     ---------->ID1                 <---------HSFB2a(2)     <---------ANAC46            <------MYB83                         --------->HSFB2a(2)     -------     <---------ANAC58            <------MYB46(1)       <----------DOF2--------->HSFC1(1)   --------->DAG2     <---------ANAC58           --------->MYB59---------->DOF2        <---------HSFC1(1)  ---------->DOF2   tctcttggcttggactatttccacggttcttagtttggtttggcttcttaaaagcctcttttttttgttcttccagaaatcagtctgcgggagaaagtgg  3432300                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                                   --------->ANAC46                                                                                   --------->ANAC55(1)                                                                                   <---------ANAC55(2)                                            --------->ANAC58                       --------->ANAC55(2)                                          --------->ZAT6                     <------ZmHOX2a(1)                                       ----------->HVH21                <---------HSFB2a(2)                                    --------->ZAT6                  <---------ANAC58                             <---------ARR11(3)       ---------->DOF2   --------->HSFB2a(2)                             --------->ARR11(3) ---------->DOF2     <---------ANAC58 -->ALFIN1                 ----------->ARR10--------->ANAC58    <---------HSFC1(2) ----------->GT1   aagaagactgaagatgaagagagctagagaagatgttcacactgacactcaaaagcgaaagcctgaagtttcgtctcgaggagaaacgtaactctcttac  3432400                                                           --------->ANAC58                                                           --------->ANAC58                                                      --------->ZAT18                           <----------DOF2       <---------MYB52(1)                        ---------->ID1          <------MYB46(1)              <---------YAB1                    <------MYB83              <---------AHL20(2)               --------->MYB46(2)           <---------AHL20(2)                  --------->MYB59           --------->AHL20(2)        <-----------GT1  <---------ZAT18     --------->ANAC46 <---------MYB46(3)   <---------MYB46(3)   tcgataaacccaattttttattgtttgttcttttcaattttacatttgttcggtagtccacaagttatattcttcaatgtagtttgatgcaattgaaatg  3432500                                                                        <---------CCA1(2)                                                                        <---------ARR14(1)                                                        --------->TOE1(2)                   <--------                                                       --------->HSFC1(2)--------->ARR14(2) <--------                                                       <---------HSFB2a(1)       --------->ZAT2                                                       --------->MYB46(3)<---------ARR14(2)--------->ARR11(3)                     ------->MYC3                      <---------HSFC1(2)------->TEIL   <---------TOE2(3)                     <-------MYC3                      --------->HSFB2a(1)       <---------ZAT2    <-                  <---------ANAC55(1)          -------->P             <---------ANAC55(2)  <---------ARR11(3)                 <-------TEIL              --------->ANAC46           --------->ANAC55(2) <------ZmHOX2a(1)           ---------->DOF2                 --------->ANAC58        ----------->HVH21 ----------->HVH21      <---------ARR14(2)                   --------->ANAC58    ------>NtERF2  ---------->DOF2    <---      --------->ARR14(2)         --------->AtLEC2  --------->TOE1(1)--------->MYB52(1)  <---------TOE1(3)   tgtaagagtatttgaaagttacatgtgtttgtgctatgcagaaacaagctacctcgaaccatcgatgccctaacgtatctcaaagctgtgaaggatattt  3432600        --------->YAB1        ---------->DOF2 --------->ANAC46                 --------->At4g35610 --------->ANAC58             --------->HSFB2a(2) --------->ANAC58             --------->LBD16 --------->GLK1(1) -CCA1(1)                     ------>ZmHOX2a(1)   ---------->DOF2   <-----------GT1 -RVE1(1)                    <---------LBD16<------ZmHOX2a(1)  ------->TEIL ----------GT1     <---------YAB1 <---------At4g35610       --------->ANAC55(2)                     < --------GT1----------->GT1 ----------->RAV1(2)----------------------->TaNAC69(2)             <------   ttcacgacaataaagagaaatatgagtcattcctggagctcatgaaggagttcaaagctcagacgtatttttacttcgcttctcttcttgtttagtttca  3432700  Previous    Next  AGI:  At1g10450.1    Description:  paired amphipathic helix repeat-containing protein. similar to paired amphipathic helix repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G70060.1); similar to ATSIN3/SIN3 (Arabidopsis thaliana sin3 homolog) [Arabidopsis thaliana] (TAIR:AT1G24190.1); similar to paired amphipathic helix repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G59890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40976.1); similar to paired amphipathic helix repeat-containing protein / transcription regulator-related [Musa acuminata] (GB:ABF70056.1); similar to putative histone deacetylase complex, SIN3 component [Physcomitrella patens Range:  from: 3432161    to: 3438371    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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