Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------At4g35610                                                          --------->ATERF1(1)                                                          <------NtERF2                                                         <---------ATERF1(1)                                                         <---------DEAR3(2)                                                         ------>NtERF2                                                         <---------RRTF1(1)                                                         <---------ERF1                                                         <---------RAP2.3(1)                                                        <---------DEAR3(1)                                                        <---------RAP2.3(3)                                                        <---------RAP2.3(2)                                                        <---------RAP2.6(2)                                                        <---------RRTF1(3)                                 <-----------HVH21     --------->ATERF1(1)                               ------>ZmHOX2a(2)       <------NtERF2                              <------ZmHOX2a(2)       <---------ATERF1(1)                             <---------ARR11(3)       <---------DEAR4(2)              ------>ZmHOX2a(2)<-------TEIL           <---------RAP2.3(1)          <---------YAB1     --------->ARR11(3)       <---------ORA47(2)        --------->YAB1       <---------ARR14(2)      <---------DEAR3(1)       <---------YAB1        --------->ARR14(2)      <---------RAP2.3(2)       --------->ICU4      --------->HSFB2a(1)       <---------RAP2.3(3)                    ---------     --------->YAB1        ----------->ARR10       --------->CCA1(2)--------------------->WRI1    --------->ICU4     --------->ETT(2)         ----------->ARR10   <----------DOF2     --------->ANAC46 <---------ANAC46 <---------GLK1(2)      --------->CCA1(2)--------->At4g35610    ---------->ID1    <-   gttgcgatgatgatgatcgagattgtcgaaagatccgtcagagagacgagaagagacggcggctctcttcctttgaatttttcgtcgtctacgactcttc  3419200                                                       --------->AtMYB61                                                 <---------ANAC55(2)                                                 --------->ANAC58                                                 --------->ANAC46                                                 --------->ANAC55(2)                                                 --------->ANAC58                                            <---------ETT(2)                                            --------->ETT(2)                                           --------->ATERF1(1)                                           <------NtERF2                                          <---------ATERF1(1)                                          ------>NtERF2------->GAMYB                                         --------->DEAR3(1)         <---------WRKY18(1)             <---------DEAR3(1)                                        --        ----------->HVH21                <---------ANAC46------>MYB46(1)                           --      <---------ANAC58                <---------DEAR3(1) ------>MYB83                           -----      --------->ANAC55(2)           ----------------------->TaNAC69(2)                          <----      <---------ANAC58            <----------DOF2--------->ANAC55(1)                            <----  --------->DOF5.7(2)           <---------At4g35610   --------->MYB46(3)                        ----- >HSFB2a(1)                 <---------ALFIN1----------->HVH21<---------CCA1(2)               -------- --------TOE1(2)          ----------->RAV1(1) <---------REM1(2)                          --------->At4g35610   cttcgtttacttgacctcagttttgctccaacacagctcttcggcgtcgacacgcaacctcccatctctctctctctatagattagaaattagctacaac  3419300 <---------HSFB2a(2)                <---------AHL20(2) --------->HSFB2a(2)                --------->YAB1 ---->MYB83                     --------->AHL20(1) ---->MYB46(1)                  <---------AHL20(2) ---->HSFC1(2)         --------->LBD16 -----HSFC1(2)<------ZmHOX2a(2) --------->AHL20(2)                                                  - -----HSFB2a(1)       --------->ANAC46  <---------AHL20(2)     <---------ATHB12        <----------DOF2 ---->HSFB2a(1)      <---------LBD16--------->AHL20(2)  ---------->DOF2            ---------->ID1   < ->REM1(1)    <---------YAB1   --------->AHL20(2) --------->MYB52(1)              <-----------GT1   -   cttccataagacgacgatcattcaccggaacaaattaattatataaaaaaaaaaacagaaaagaaatcaagagagagcaacgtttttctctttgatcaat  3419400                  --------->ICU4                                                            <--------                  <---------YAB1                                                            ---------                --------->YAB1                                                             --------->ARR14(2)          --------->ARR14(2)                                                             ----------->ARR10          --------->GLK1(2)                                                          --------->At4g35610          <---------ARR14(2)                                <---------YAB1           <---------ZAT2         <---------GLK1(2)                               <---------AHL20(2)          --------->ZAT2 -------->HSFB2a(2)--------->YAB1                 ----------->RAV1(1)        <---------HSFB2a(2) ---------HSFB2a(2)<---------ICU4  <---------YAB1--------->ZAT18  ---------->DOF2    <---------At4g35610 -------------->AGL15         --------->ZAT6---------->DOF2 <---------TOE2(3)--------->HSFB2a(2)  ---   ttctggtaatagaatctgtcatcatcaaaacaacactataaatgaataaagcccacaaatttatcgttgaaaggcacttcgagagagagctgagatttgc  3419500                                                                                         <-------TEIL                                                                                        --------->CCA1(2)                                                                                        --------->ARR14(1)               <------MYB46(1)                                                          --------->GLK1(2)          --------->ATHB12                ----------->GT1                              --------->ARR11(1)          --------->ATHB51              --------->LBD16                                <---------ARR14(2)          --------->AHL20(2)           <---------ANAC46                                <---------GLK1(2)          <---------AHL20(2)       <----------DOF2                           --------->ARR11(3)         --------->AHL20(2)    <-----------GT1                               <---------ARR11(3) -----  <----------ID1       ---------->DOF2<---------LBD16                        <---------GLK1(2) ------ -GLK1(1)<---------AHL20(2)--------->ARR11(3)                              ----------->ARR10 -------- >CCA1(2)<---------AHL20(1)<---------ARR11(3)                     <---------AHL20(2)   --------->ARR14(2) ------->DOF2  <------MYB83<---------GLK1(2)                  <---------AHL20(2)      <---------GLK1(1)   gaaagagacaaattatttggtgaagaaaagatttttcctttgcggagaaaaaaaaaactattgtttattttttgggttagatttttggagattcggaaag  3419600  --------->AHL20(2)  <---------AHL20(2)  --------->AHL20(1)                                               <-----------GT1  <---------AHL20(1)                    >>>>>>>>>TBF1             <-----------GT1 ------------------->ANAC81             *TSS      ----------->GT1<---------AHL20(2) ----->GT1                          <------ZmHOX2a(1) ---------->DOF2          <----------DOF2    <-- -->DOF2                    >>>>>>>>>TBF1  >>>>>>>>>TBF1  ----------->GT1   <---------MYB52(1)  <----   tcaataaaatgagagaaaaatatcaacgaagaagaagaggaagaagaagaagtagttaaagagttattttatctcttcgttcttttgtttgttttgtttt  3419700                                                <---------YAB1                                               ===========================HOX2a_HOX2a                                               ------>ZmHOX2a(2)                                              <---------At4g35610                                              ============================HOX2a_HOX2a                                              <------ZmHOX2a(2)                                             <---------ARR14(2)                                             --------->ARR14(2)    <------ZmHOX2a(1)            -----                                             <---------AGP1       <------MYB83                 <-----                                             --------->GLK1(2)    <------MYB46(1)             <------                                             <-----------ARR10  <--------P                  <--------                 <------------CBF            <---------ARR11(3)<-------GAMYB          --------->TOE1(3)      <---------AHL20(2)                    <---------ARR14(1) <---------MYB52(1)     --------->TOE2(3)      --------->AHL20(2)                    <---------CCA1(2) <---------MYB46(3)  --------->WRKY12   <----------DOF2      --------->AHL20(2) --------->LBD16    <---------DEAR3(2)  ----------->HVH21 ---------GT1   --------->ATHB12         <---------LBD16     <---------DEAR3(1) ===================== -------GT1    --------->MYB46(3)<---------ARR11(3)      <-------TEIL           ----------->RAV1(2)   tctctcttttaatttgaaccattgaattaaaccgagttcttaaaccggatctgattaagtacgtcggtaggagtatgactccctctgaccttaactttgt  3419800                                                                                                <----                                                                                <---------YAB1  -----                                                                                ------>ZmHOX2a(1)  <-        --------->YAB1                                                         --------->TOE2(3)<----        <---------ICU4                                                         --------------->AGL15       <---------ATHB12                            --------->AHL20(2)         ----------------->AGL1 --------->ANAC58                                 <---------AHL20(2)        --------->ARR11(3)  ----- --------->ANAC58                              --------->AHL20(2)        --------->AHL20(2)     <---- ----->ID1                                     <---------AHL20(2)        <---------AHL20(2)     ----- ------HVH21                                --------->YAB1          <---------AHL20(1)         ------ -----RAV1(1)       <---------YAB1          --------->AHL20(2)     <---------CCA1(2)  ----------->GT1 --DOF2--------->ICU4                    --------->YAB1     <---------YAB1 <---------CCA1(2) -------- =====RAV--------->TOE2(3)           --------->ZAT6<---------AHL20(2)<---------AHL20(2)    --------->AHL20(2)   cgctcgctaatcatcaattcatatgatatatatggagtttcactaataaaaaattattttctataattcatatatttatatcctgaatgagaaaaaaata  3419900            <---------AHL20(2)                                     <---------MYB111(1)           <---------AHL20(2)                                    ------>MYB83      <----------DOF2                                      <---------GLK1(1)   <-----------GT1                                         --------->GLK1(1) -----ARR11(3)                                      --------->AHL20(2) ---->AHL20(1)                                      <---------AHL20(1) --------AHL20(2)                                   <---------AHL20(2) -----AHL20(1)        ----------->GT1               --------->AHL20(1) ---->ARR11(3)       --------->DAG2                <---------AHL20(2)------>MYB46(1) -----AHL20(2)      ---------->DOF2                --------->AHL20(2)------>MYB83     <---------YAB1 ---->AHL20(2)  --------->AHL20(2)               --------->YAB1  -------->P           --------->ICU4 --->AHL20(2)  --------->AHL20(2)            --------->AHL20(2)  ------>MYB46(1)    <---------ICU4<-- ->AHL20(2)--------->AHL20(2)                <---------AHL20(2) ------>ZmHOX2a(1)--------->YAB1  ----   tattatttctttattaaataaaaaaagtagaaatttcattttggcatttaaaaataaattgaaatcctaccaactaatttgtttcataatgtttgtatca  3420000                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                            ---------                                                                                          --------->TGA1a                                                                                          --------->O2                                                                                          <---------TGA1a                                                                                          <---------At4g35610                                                                                          <---------ANAC55(2)                                                              ----------->GT1             --------->ANAC55(2)                                                             --------->DAG2           <-----------HVH21                                                           ==========================================                                                           ---------->DOF2            <---------PCF2                                            <---------TOE2(3)<---------TOE2(3)       <------MYB83====                                    --------->YAB1<---------AHL20(2)             <---------O2    <---                  <------MYB46(1)   --------->TOE1(3)      =========================================bZIP_DOF                  <------MYB83      --------->TOE2(3) --------->AHL20(2)--------->ANAC58  <---------O2                 --------->MYB59   <<<<<<<<<ARR1  --------->AHL20(2)    --------->AtLEC2  ===========      ----------->GT1              <<<<<<<<<ARR2  --------->ICU4   --------->ANAC58  <------MYB46(1) ----ZmHOX2a(1)<<<<<<<<<MYB98----------->HVH21<------ZmHOX2a(1)    --------->ANAC58--------->ALFIN1 ------->GT1   <---------MYB52(1) --------->GLK1(2)   <---------AHL20(2)--------->ANAC58  --------->At4g35610   ggaaaaaatggttataagttaggtttttgatgtgacaatcttaacttaggaaaaaattaaaaaaaggttaagccatgcaagagaagtgggtcatgtgact  3420100  Previous    Next  AGI:  At1g10410.1    Description:  similar to CW14 [Arabidopsis thaliana] (TAIR:AT1G59650.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF98316.1); contains InterPro domain Protein of unknown function DUF1336 (InterPro:IPR009769) Range:  from: 3416681    to: 3419640    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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