Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->YAB1                                      <---------ATHB12                               ----------->HVH21                            <------NtERF2                                                     <------                            ------>NtERF2<---------YAB1                                 <----------DOF2                          <---------DEAR3(1)                                          --------->At4g35610                          <---------ANAC46<---------ICU4                              <---------ZAT2                          <---------RAP2.3(2)                                        ------>NtERF2                         <---------LBD16 --------->ICU4                            --------->ATERF1(1)                    --------->ARR11(3)--------->ICU4 --------->AtLEC2             ------>NtERF2 ----- ->DOF2   <------ZmHOX2a(2)<---------RAP2.3(1)  --------->ANAC46                 --------->ANAC46   attgaagtagcgatcgatgtgagaacttgcggcgagaccgatgatgattccagccatgaaaattagcaaaaacgacagcgtttgcgccagctttagtaac  3368700                                           <---------HSFC1(1)                                           <---------HSFB2a(2)                          ------>ZmHOX2a(2)                                --------->ANAC46                                       <---------GLK1(1)                    <----------DOF2        --------->HSFB2a(2)            ----------->RAV1(1)                  ------>ZmHOX2a(1)        --------->HSFC1(1)            --------->MYB46(3)        <-----------GT1         --------->ANAC58                    --------->ANAC46  <---------ARR11(3) -----GT1     ------>ZmHOX2a(1) --------->ANAC58                --------->ANAC46      --------->ARR11(3) ---->ZAT6<-----------GT1    ------>ZmHOX2a(1)              ---------->ARF1       --------->YAB1 ----   cctatgtgtttttctccttcctctttccctcctctcgccattgttcgagaaactcaaaacttgtctacccaaacaacaacacagtgatgatctctgttcc  3368800                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                             --------                                                       --------->ANAC58                      <-------                                               <---------WOX13(1)                            --------                                         --------->GLK1(2)                               <---------HSFB2a(1)              --------->LBD16            <---------ARR14(2)                              <---------HSFC1(2)             <---------LBD16             --------->ARR14(2)                              --------->HSFB2a(1)            <---------LBD16              <-----------ARR10                               --------->HSFC1(2)     ---------->DOF2                    <---------GLK1(2)                           --------->HSFB2a(2)  --------->YAB1            <---------YAB1  <---------YAB1   --------->GLK1(1)      <---------HSFB2a(2) ----->LBD16<-----------RAV1(2)   ---------->DOF2      --------->ANAC58           ------>ZmHOX2a(1)   ccaaaaataaagtttcagggaaacattcttatgattcaaagagaatctgattgtttcaagcacaaatccattgcattcaatctcctcgagaaatttccta  3368900                                                                                    <---------HSFB2a(2)                                                                               <---------HSFB2a(1)                                                                              <---------ARR14(2)          <---------YAB1                                                      <---------ARR11(3)          <---------AHL20(2)                                                  --------->ARR14(2)          --------->AHL20(2)   --------->ANAC46                               --------->ARR11(3) ----------->GT1               --------->ANAC58                              --------->GLK1(1) >ZmHOX2a(1)                   --------->ANAC58    ----------->GT1           <---------GLK1(1) -------->AGL15           <------ZmHOX2a(2)    --------->MYB111(2)      <---------LBD16 -->TOE2(3)   --------->AHL20(2)               --------->MYB111(1)    ========================HOX2a_HOX2a ---------AGL15       <---------TOE1(2)       <--------P              ------>ZmHOX2a(2) ---------->DOF2 --------->AG <---------AHL20(2)           --------->DAG2           <---------AGP1  --------->HSFB2a(2) ----------AGL1     --------->TOE1(2)     --------->DAG2            <---------ARR14(2) ============== --------->AGL1<---------AHL20(2)        ---------->DOF2            --------->ARR14(2) <------ZmHOX2a(1)   aatttgtaacatataattaaatccaaggatcaaacgaaatcgaaaaaggtaagtggataaatggaaattggatctgtggaaatcttcgaggaaagtgaga  3369000                                                      >>>>>>>>>TBF1                                                   >>>>>>>>>TBF1               =================================HOX2a_HOX2a          <---------ARR14(2)               <------ZmHOX2a(2)--------->AtLEC2>>>>>>>>>TBF1        --------->ARR14(2)  <---------YAB1   <---------GLK1(2)         >>>>>>>>>TBF1           --------->GLK1(2) =====================HOX2a_HOX2a        <------ZmHOX2a(1)  --------->YAB1   <----------DOF2     *TSS   aacgatgactgaaacagatcagaaactgaatttcatgcagagaggaagaagaagaagaagaaacataaacaaatctggtcttttgtttcttccagttgaa  3369100                                         <----------ID1                        <---------ARR11(3)                                          <------------CBF                        --------->ARR11(3)          <------------CBF               --------->ATHB12               <--------P             ---------->DOF2                             --------->AHL20(2)               <---------WOX13(1)   <---------AHL20(2)          <---------YAB1    <---------AHL20(2)              <-------GAMYB     --------->AHL20(2) --------->ATHB12      --------->AHL20(2)             ----------->GT1    <-----------TBP   <---------AHL20(2)     <---------AHL20(2)             <---------MYB46(3) <---------AHL20(2)--------->AHL20(1)    <---------AHL20(2)            <---------AtMYB61 <-----------TBP     --------->AHL20(2)    --------->AHL20(2)          --------->ALFIN1------>ZmHOX2a(2)      --------->AHL20(2)     <---------AHL20(1)          <   atctatgtgtgtgtgtggttgattttgatcttatatatataaaagaacaaaattaattggaatgttatgcttaatttaattagattaattgagtttaaaa  3369200                                          <-----------RAV1(2)                                     ------>ZmHOX2a(2)                                     <-------MYC3                                    <------ZmHOX2a(2)                                      ------->MYC3                                   --------->ARR14(3)                                <---------ZAT18                                   <-----------ARR10                                 --------->PCF5                                   <---------ARR14(3)                                <---------PCF5                                   --------->ARR14(2)                                <---------TCP16(1)                                   --------->ARR11(3)                                --------->ZAT18                                   <---------AGP1                                    <---------TCP15(1)            --------->YAB1         <---------ARR14(2)                                <---------PCF2         --------->DAG2            --------->AGP1                                    --------->PCF2        ---------->DOF2            <---------ARR11(3)                               ----------->TCP11(1)  =================bZIP_DOF       <---------CCA1(2)                               --------->SPL7  =================bZIP_DOF    --------->At4g35610                               <------NtERF2  --------->O2                 <------NtERF2          --------->GLK1(2)         <---------SPL7      -  --------->TGA1a              --------->LBD16      <---------KAN4(1)           <------NtERF2 -------  --------->bZIP60(2)          <---------At4g35610  --------->KAN4(1)           --------->LBD16     -  <---------TGA1a            --------->ZAT18   ----------->GT1                 <---------DEAR3(1) <--  --------->ANAC46           <---------LBD16<---------ZAT2                    <---------LBD16 <------  <---------O2 --------->MYB52(1)----------->ARR10 <---------KAN4(2)   --------->ATHB12  <---------TOE1(2) ---------ALFIN1        ---------->DOF2  ----------------->AGL1       --------->ARR11(3)<---------ALFIN1   ctccacgtcgaaaagcataacgagttcaaagtccgcagatcttgccagatgggaataatctattggttttaagttattgggccggagggcccacgtttaa  3369300   <---------ANAC46   <---------TGA1a   --------->bZIP60(1)   <---------ANAC58   <---------ANAC55(2)   <---------bZIP60(1)   <---------bZIP60(2)                                                 --------->GLK1(1)   <---------ANAC55(1)                                                 <---------GLK1(1)   --------->ANAC55(2)                                                <---------ARR11(3)   <---------ANAC58                                                --------->HSFB2a(2)   --------->O2                                              <---------ATHB51   --------->TGA1a                                     --------->HSFB2a(2)   <---------O2                             <----------DOF2  <---------AHL20(2)  ----------->STF1                ----------->RAV1(1)  <---------HSFB2a(2) ---------->TGA1                 ----------->HVH21  <---------YAB1 <---------HSFB2a(2) -->AHL20(2)                     <---------ETT(1)==================================================== ---------->HVH21   <---------WRKY12        <---------DAG2   --------->AHL20(2) -------ICU4      <-----------HVH21      <-----------GT1     --------->ICU4 ---AHL20(2)  <---------ZAT18   --------->SPL7   --------------->AGL15--------->ARR11(3)   ttgtgacgtggtttagtgctcgtcaactctttggtccgacatttcacttttttttttatagaaataattctagatatccagtagtcaaacttattgatta  3369400                                   <----------DOF2                            <---------AHL20(2)                            --------->AHL20(2)                            --------->AHL20(1)                                               <-------                 --------------->AGL15  <---------TOE2(3)       <-----------GT1              --------                 <---------------AGL15 <-----------GT1 <-----------GT1                      ---------                 ====================================================================================             ------>ZmHOX2a(1)  <-----------GT1   <---------GLK1(2)                 ----------->GT1            --------->TOE2(3)<---------ICU4    <---------HSFC1(1)            <-----------GT1<--------         <---------ARR11(3)<---------AHL20(2)  <---------HSFB2a(2)      --------->ICU4      <--------        <---------CCA1(2)  --------->AHL20(2)  --------->HSFC1(1)     ------->TEIL<---------YAB1 ================================MADS_MADS     --------->HSFB2a(2)--------------->AtSPL8    ---------   tctaatttctatatccttactatttttaaaaaaattacttttaacatttctagaatttttcgattttttctgtacttattaactattagtaaaatttatt  3369500                                                                          --------->ATHB12     <----------DOF2                                                     <---------ATHB12  --------------->AGL15                                                  --------->ICU4            --  <---------------AGL15                                                  <---------YAB1           <-- <-----------------AG                                                   <---------TOE2(3)         <-- --AHL20(2)                                                            --------->YAB1            ---- ->ATHB12                                                             <---------AHL20(2)         <--- >AHL20(1)                                                     ---------->ID1                  ------ =================MADS_MADS                                    <-----------GT1     <---------ARR11(3) -AHL20(1)                                              <---------AHL20(2)<---------ICU4     <------- -AHL20(2)                                         <---------YAB1 <----------DOF2  <---------GLK1(2)< >AHL20(2)                                   <---------YAB1   <-----------GT1      --------->ARR11(3)   gatgcttcttttggttatgttatagtattgagacaatgtattgtattctaattttgattttttttttcctttttaatgatttgtagattttgttttttca  3369600  Previous    Next  AGI:  At1g10280.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G21310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46901.1); contains InterPro domain Protein of unknown function DUF266, plant (InterPro:IPR004949) Range:  from: 3366495    to: 3369097    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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