Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     --------->ARR14(2)   <---------ARR11(3)   <---------ARR14(2)   <---------ARR11(1)  <---------CCA1(2) ---------------AGL1 ----->ARR14(2) ----->PCF2 ------TCP20                                                                         --------->ANAC58 ----->HVH21                                                                         --------->ANAC58 --->LBD16                                                                           --------->ANAC46 -->LBD16                                                  <---------ALFIN1        <---------ALFIN1 -->HSFB2a(2)                                           <------ZmHOX2a(2)         --------->TOE1(2) -->ANAC46                   --------->YAB1     --------->ANAC46            --------->YAB1 --HSFB2a(2)                <---------YAB1    <-----------GT1  <----------DOF2   --------->DEAR3(2) ->HSFB2a(2)         --------->DAG2  ==========================HOX2a_HOX2a --------->At4g35610 --LBD16            ---------->DOF2  ------>ZmHOX2a(1) <-----------HVH21 --------->YAB1        <-----   acccatatctgcaattttcacaaaaagcctattatggtcctaaattttaaaccccacgatcacacctttattgtatcatcagaacccacgctagttttgc  3363100                                                                                          ------->MYC3                 <-------TEIL                                                             <-------MYC3                --------->AtLEC2                                                     ------>MYB83           --------->ANAC58                                                          ------>MYB46(1)           --------->ANAC46                                                        --------->AtMYB61           --------->bZIP60(2)                                                     ------->GAMYB      --------->ANAC46                                                            --------->MYB46(3)      --------->ANAC58                                                         <---------MYB111(2)      --------->ANAC58                                                         --------->MYB46(3)  --------->ANAC58                                                ----------->GT1-------->P  --------->ANAC46   ----------->GT1                    ------>ZmHOX2a(1)      <---------MYB111(1)  --------->ANAC58<---------AtLEC2          --------->ANAC55(2)<------ZmHOX2a(1)------->GAMYB       < ----ZAT18 --------->ANAC58     --------->HSFB2a(2) <-----------GT1            <---------MYB55(2)   <   actcacacaaaccacgacatgcatggcaaaatttctcgacttcttcaagtgatatttcctcactaggatggaaactttccaacaaccatccatatgcaga  3363200              <------MYB46(1)              <------MYB83                                 <-------GAMYB            <--------P                                    <---------MYB46(3)            <<<<<<<<<<MYB80                               ----------->GT1          --------->ATHB12--------->ZAT2      --------->ANAC58          --------->MYB55(2)                  --------->ANAC58                          --------->ANAC58          <---------MYB46(3)                  --------->ANAC55(2)            <----------DOF2     <--- ---------ANAC58  <---------At4g35610         <---------ANAC55(2)    <---------MYB52(1) --------->ANAC58 ---------ANAC58  --------->At4g35610         --------->ANAC55(1)--------->ARR11(3) <------ZmHOX2a(1)   gtgcatgcttagtggttggcatctcaccagctatggattatttgagacacgtattatggtctgttaatatcgtttgggcctttgaaggagaagccctaaa  3363300                                                  --------->MYB46(3)                                                 ---------->DOF2                                                --------->MYB52(1)                                                ------>MYB46(1)                                                ------>MYB83                                              <---------MYB46(2)                                           <-----------GT1               <---------O2    <---------YAB1             <-----------GT1          <---------ANAC55(2)                --------->bZIP60(1)           <----------DOF2            --------->ANAC55(2)                --------->O2   <-----------GT1      <---------DAG2                  --------->ANAC55(1)                <---------bZIP60(1)    -------->P <---------ANAC58       --------->ANAC46           --------->ZAT6    --------->AHL20(2)    ------>MYB46(1)          <-----------GT1  <---------MYB59  <-----------GT1     <---------AHL20(2)    ------>MYB83     <----------DOF2  --------->ANAC58       <---------AHL20(2)  <----------DOF2 ------AHL20(2)<---------ANAC58       --------->ANAC58       --------->AHL20(2)  ------>ZmHOX2a(1)   taatccaacctttctttacttgtctttggaataacattacacgtattaccaaacagccctcatttaaacactacgacgtcgtcctttaattttcatttcg  3363400                                                                                        <---------ANAC58                                                                                   <---------MYB46(3)                                                                                <------------CBF                                                      --------->ZAT18          --------->ATHB12                                                      <---------ZAT18         <---------YAB1                                                    <---------ZAT2           <-----------HVH21             ---------->DOF2                        --------->ZAT2           <-----------TGA1         --------->YAB1                           ------->PIF5              --------->YAB1        <---------AHL20(2)                        <-------PIF5           --------->AtMYB61       --------->AHL20(2)                   --------->ANAC58            --------->MYB46(3)      -----    <----------DOF2                         --------->ANAC58          <---------ALFIN1  <---------ANAC46    <---------DAG2    <---------CCA1(2)     --------->ANAC46          --------->ANAC46  <---------ANAC58   acattactttttaataaaagtcccatttcttcacatccaagggtttaagccacgagctcgctctctctactcccaccatcgtcattggtttcgtcttcct  3363500                                                                <---------ZAT14                                                          ------>NtERF2                                                         --------->RAP2.3(2)                                                         --------->DEAR3(1)                                                         --------->RAP2.3(3)                                                        --------->ORA47(2)                                                        --------->RAP2.3(1)                                                       ------>NtERF2                                                       --------->LBD16                                                       <---------ATERF1(1)                                                      --------->DEAR3(1)             --------->LBD16                                                      --------->ANAC46           -------->P                                                    <---------ATERF1(1)      --------->AtMYB61                  <---------ICU4                    ------>ZmHOX2a(1)        --------->ZAT6           --------->TOE2(3)                       <---------ALFIN1    --------->AtMYB61      *TSS --------->TOE1(3) <---------ALFIN1   <---------ALFIN1--------->ZAT14 <---------ALFIN1  --------->TOE2(3)       --------->ANAC46     <---------At4g35610    --------->MYB46(3)      <------ ->ZmHOX2a(1)    <---------ATHB12          <-----------HVH21  --------------->AtSPL8--------->ANAC46   ctaacctctaaaaccctaaatcattttccctccaccatgtctctcagtcacctcctccgccgtctctgtacaaccactaccactacccgtagccctcttt  3363600                                                                   <---------ALFIN1                                                       --------->ARR14(1)                                                       ===================================HOX2a_HOX2a                                                       --------->CCA1(2)                                                       <------ZmHOX2a(2)                                                      --------->ARR14(3)                                                      <---------ARR14(3)                                                      --------->ARR14(2)                                                      <---------ARR11(3)                         --------->ANAC46             <---------ARR14(2)                       --------->ANAC46               --------->ARR11(1)                    ------->TEIL            <------NtERF2          --------->AtMYB61--------->ARR14(2)                 --------->ANAC58          --------->LBD16    --------->ATERF1(1)  <------ZmHOX2a(1)                 --------->ANAC46          ------>NtERF2------>ZmHOX2a(2)       --------->YAB1                 --------->ANAC58         --------->LBD16    <---------ATERF1(1)<---------ICU4                ------>MYB46(1)           --------->ANAC46--------->LBD16    <---------ICU4                ------>MYB83             <---------LBD16<---------LBD16      --------->YAB1              <---------ALFIN1--------->At4g35610     --------->ARR11(3)    --------->ICU4              --------->AtMYB61          --------->LBD16==================================HOX2a_HOX2a              --------->DEAR3(1)    <----------DOF2  <---------GLK1(1) --------->YAB1             --------->MYB46(3)     <---------DAG2  ----------->ARR10  ----------->GT1 ----DOF2------>ZmHOX2a(1)   <---------ARR11(3)  <---------ATHB12 --------->MYB46(3)<---------ARR14(2)   ccatctcgttcctccaccaacgcatccacaacatctcactttccccggcaaatgaagatccggagacgaccactggtaataatcaggattcagagaaata  3363700                                                                                        --------->TOE2(1)                                                                                    --------->LBD16                                                        --------->ANAC58           --------->ANAC58                                                        --------->ANAC46           --------->ANAC58                                        --------->ARR14(2)                         --------->ANAC46                                        <---------GLK1(2)                         <---------LBD16                           ------>ZmHOX2a(1)            --------->ANAC58     --------->MYB46(3)                         ===========================HOX2a_HOX2a              <---------MYB55(2)                         ------>ZmHOX2a(2)            <---------ALFIN1      --------->ANAC46    --------->TOE1(3)  <---------ARR11(3)    ------>ZmHOX2a(1)           --------->MYB46(3)    --------->TOE2(3)  --------->ARR11(3)   --------->TOE2(3)          --------->ARR14(2)  --------->SPL7 <---------ALFIN1    <---------ATHB12   <---------ARR14(2)             <---------ARR14(2)<---------SPL7   cccaaaccttaatcccattccaaatgatccttcccaattccagattcctcagaatcacacccctccaattccctatccacccatcccgcatcgtaccatg  3363800                                       --------->RAP2.6(2)                                       <---------ANAC46                                       --------->RAP2.3(2)                                     ------>NtERF2                                     --------->ABI4(1)                                     <---------ATERF1(1)                                    --------->RAP2.3(2)                                    --------->RRTF1(3)                                    --------->RAP2.6(2)                                    --------->RRTF1(2)                                    <---------DEAR3(1)                                    --------->RAP2.3(3)                                    --------->DREB2C(2)                                    --------->DEAR3(1)                                    --------->ATERF1(2)                                   <------NtERF2                                   --------->RAP2.3(1)                                   --------->ORA47(2)                                   --------->RAP2.6(1)                                   --------->ATERF1(1)                                   --------->DEAR4(2)                                   --------->ERF1                                   --------->RRTF1(1)                                  ------>NtERF2                                  --------->ABI4(1)                                  --------->At4g35610                                  <---------ATERF1(1)                                  <---------DREB2C(1)                                  <---------At4g35610                                  <---------RAP2.3(1)                                  <---------DEAR4(2)                                 --------->RAP2.3(3)                                 --------->RRTF1(3)                                 --------->RRTF1(2)                                 --------->ATERF1(2)                                 <---------DEAR3(1)                                 --------->RAP2.3(2)                                 <---------ALFIN1                                 <---------ATERF1(2)                                 --------->DEAR3(1)                                --------->RRTF1(1)                                --------->ATERF1(1)                                --------->DEAR4(2)                                <------NtERF2                                --------->ORA47(2)                                --------->RAP2.3(1)                                             <----                                --------->ERF1                                                  <----                                --------->RAP2.6(1)                                             -----                               <---------ATERF1(1)                                <-----------HVH21                         <----------CDC5 --------->DOF5.7(2)              --------->ANAC46  =========                        --------->ZAT2--------->RAP2.3(1)                 --------->ANAC58  ------>ZmHOX2a(1)                        --------->At4g35610  --------->ANAC46           <---------ALFIN1 <------ZmHOX2a(2)                        <---------At4g35610<---------DOF5.7(2)         <---------REM1(2) ============                        <---------ZAT2<------NtERF2                 ============================HOX2a_HOX2a                     --------->At4g35610--------->LBD16            <---------ALFIN1      ============                     <---------At4g35610--------->At5g28300   ------->TEIL--------->ANAC58  <--------               ---------->DOF2 <---------RAP2.3(1)           <-----------GT1     --------->ANAC46   <         --------->At4g35610   <---------DEAR4(2) --------->ATERF1(1)--------->ANAC46   --------->ARR14(2)         <---------At4g35610  <---------DEAR3(1) <---------ATERF1(1)------>ZmHOX2a(1)   <---------ARR14(2)   gccttctcttcagccgaagaagccgctgctgagcgccgccgccgtaaacgtcgtctccgaattgaacctcctctccacgctctccgtcgcgatccttcag  3363900                             --------->ANAC58                             --------->ANAC58                            ------>NtERF2                           --------->DEAR3(1)                           <---------ALFIN1                          ----------->HVH21                          <------NtERF2                         <-----------HVH21                  <------NtERF2    ====================HOX2a_HOX2a                        <---------DEAR3(2)    ------>ZmHOX2a(1)    ------>NtERF2 --------->ARR14(2)  ------>NtERF2 ------>ZmHOX2a(1)      --------->ANAC46                <-----------HVH21 =======================HOX2a_HOX2a    <---------ARR14(2) <---------DEAR3(1) -----At4g35610         --------->ANAC58               <---------O2 -----ZAT2 <---------ANAC55(2)       --------->LBD16   ====================================MYC_MYB ---->At4g35610         --------->ANAC58               --------->TGA1a                    --------->WOX13(1) =======================HOX2a_HOX2a <---------HSFB2a(2)<---------TGA1a             ------->GAMYB ==========HOX2a_HOX2a ==========================================MYC_MYB        ----------->RAV1(1) =======HOX2a_HOX2a    ------->GAMYB--------->HSFB2a(2)--------->O2            --------->ANAC46 ---HVH21  --------->ANAC55(2)   <---------SPL7   --------->At4g35610     --------->TOE1(3) <-------- ---------ALFIN1 ------>ZmHOX2a(2) <---------LBD16<---------At4g35610     --------->TOE2(3) ---------   ctcctcctccaaaacgtgatcccaacgcgccacggcttccggattcaacttccgctctcgtcggccaaaggcttaaccttcacaacagagtccaatcact  3364000  Previous    Next  AGI:  At1g10270.1    Description:  GRP23 (GLUTAMINE-RICH PROTEIN23); binding. similar to EMB1796 (EMBRYO DEFECTIVE 1796), binding [Arabidopsis thaliana] (TAIR:AT3G49240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46900.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60262.1); similar to ACT11D09.4 [Cucumis melo] (GB:AAS80150.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 3363506    to: 3366490    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version