Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->DEAR3(1)       --------->ANAC46      <---------At5g28300     <-----------GT1   <-----------ARR10                        <---------At4g35610                                     -  <---------CCA1(2)            ------>ZmHOX2a(1)                                            ========= ------>ANAC58                 <----------DOF2--------->ZAT18                               <------ZmHOX2a(2) ------>ANAC58         --------->ANAC46     --------->At4g35610                            <---------ARR11(3) ----SPL7<---------ZAT18      --------->TOE2(3)           <----------DOF2         <---------ICU4 ---- --------AtSPL3   <-----------GT1--------->AHL20(2)  ---------->DOF2----------->RAV1(2)    --------->AGP1   acgcatatcaccgcacatattttccacagcatcctttaaatccataagctcacagcaaagctttctaatcccctgcattgttcaacattaccagatcaac  3341200                               --------->YAB1                               <---------ICU4<------MYB46(1)                     <------ZmHOX2a(1)       <------MYB83                  <-----------RAV1(2)        <---------DEAR3(2)                 ------>MYB46(1)            <---------TOE1(2)                 ------>MYB83 --------->ICU4<---------TOE2(2)                 -------->P   <---------ATHB12  <-------TEIL        --------->ANAC58                ----------->RAV1(1)      --------->YAB1             ----------->GT1 -------->YAB1  --------->MYB52(1)      <<<<<<<<<ARR2               --------->ANAC58        --------- ===========================HOX2a_HOX2a <<<<<<<<<ARR1               <---------ANAC55(2)  <---------GLK1(2) --->GAMYB     --------->AtMYB61     --------->MYB46(3)    --------->WOX13(1)        <---------At4g35610   gagcataaacccatggaccaacaggagaagtaatcatgaacaatcgtaggttcaacaatttcaatccaagacgtaaaattcgagggctactgattcttaa  3341300                                                   ------->TEIL                                                <---------ATHB12                                            --------->ZAT14                                       <--                                            --------->ZAT18      ----------->GT1               ------                                    --------->ARR14(2)   <---------ZAT14              ---------->DOF2    --------->AHL20(2)   <---------TOE2(3)  <---------ZAT14     ------------------------>ANAC81<----- >TOE2(3)  ---------->DOF2          <---------ARR14(2)   --------->ZAT14         ---------->DOF2 <---   tccagattaattcgaaagaacccatttgagataaactatatccgagtgcaatgaatcagttcagagaaggaaacaactcagaaaaaagaaaaggagagac  3341400                                                      --------------->AGL15                                                      <---------HSFB2a(2)                                 --------->WRKY38(1)  <---------------AGL15                                 --------->WRKY12     --------->HSFB2a(2)                               <----------DOF2       ----------------->AGL3                              ==================HOX2a_HOX2a                              ------>ZmHOX2a(2)      ----------------->AGL2                            <---------ARR11(3)       <-----------------AGL3                            --------->ARR11(3)       <-----------------AGL2                    --------->ANAC58              <----------DOF2                   --------->ZAT2 --------DOF2       --------->ANAC46             <---------ANAC58                   <---------At4g35610 --->ARR11(3)       --------->ANAC58             <---------ANAC58                   --------->ZAT14 ----ARR11(3)     --------->MYB52(1)        --------->ALFIN1                   ------>ZmHOX2a(1) ------DAG2      <---------WRKY38(1)     <------ZmHOX2a(1)            ---------->ID1--------->At4g35610   cttttcggtgagagactggtgaacggaatcgatctttgactgaggagtgatgctttctataaatgggtactcgtcgtcttcctcgctgctctccatgtct  3341500                                                            ---------->DOF2                    <-----                            <---------LBD16              ----------------->AGL1  <----------DOF2            <-----------GT1 <---------HSFB2a(2)      <-------GAMYB   --------->ANAC58          ------  <----------DOF2           ------>ZmHOX2a(1)    ------------>AtMYB77--------->ANAC58          ------   ctcgctctatctatttccccttcagttttcctcggagtctcactgtctcagacacggttgccgaaagaagcacgatagtgatgctttggactctctctgc  3341600                                                       <---------ANAC46                                                    --------->ANAC58                 <------NtERF2                                             <-----------------AGL1                --------->ANAC46            --------->ARR14(2)     <---------DAG2   --------->ANAC46               --------->ANAC58            <---------GLK1(2)      <----------DOF2  --------->ANAC58      --------->ANAC46            <---------ARR14(2)    <---------ANAC58 --------->RAP2.6(3)    --------->ANAC58  ---------  --------->ANAC58                <---------ANAC58--------->MYB52(1)      --------->ANAC58  <--------  --------->ANAC58            <------------CBF --------->ANAC46     --------->ARR11(3)      <--------  --------->ANAC46      --------->YAB1      <---------ZAT18         <---------ARR11(3)      --------- ----At4g35610          ----------->GT1 --------------->AtSPL8<---------ZAT6       --------->ANAC58 < --->ZAT14*TSS        <------------CBF  <---------------AtSPL8----------->GT1     --------->RAP2.6(3) --->At4g35610<-------TEIL <-----------GT1  --------->ZAT18 <---------ANAC46  ---------->DOF2    <---   tctcaagacacacagattcgtcggaattgtaacattgctttttttgtacacaaaacggcatgtagtgtaatatctcaagccaaagacggcacgatggttc  3341700 >HSFC1(2)                --------->AtLEC2          ------>ZmHOX2a(1) -MYB46(3)           --------->ANAC46              --------->TOE2(3) -HSFC1(2)      <----------DOF2           --------->ZAT6                   --------->TOE2(3)       -- >HSFB2a(1)     <---------DAG2           --------->ZAT14              <---------AHL20(2)           -- ---------TOE1(3)   ---------->ID1       <---------ZAT14              --------->AHL20(2)        <---- ------YAB1    <---------DAG2  <---------------AtSPL3                --------->YAB1--------->YAB1 ---   ttatggtttttgtcatacctttttcgccatgaagaagtaagtctacactatttcctaaacttctactacaattttaatctcaaaatcaaaattttgttta  3341800                          --------->WRKY38(1)       <---------YAB1                   <---------ARR11(3)              <---------AHL20(2)                   --------->ARR11(3)  <---------WRKY18(1)                                     ------             --------->ANAC58         --------->WRKY38(1)                                      <-----        --------->ANAC46  --------->WRKY12         --------->AHL20(2)                          <-----      <-----------GT1     --------->WRKY45      --------->TOE2(3)                              ------ ----->GAMYB --------->ANAC58         --------->WRKY12                                   --------->ZAT2 ------->TOE2(3)  --------->CCA1(1)   --------->WRKY45                                   <---------ZAT2 -------GT1--------->MYB52(1)  <---------ZAT14--------->AHL20(2)    --------->YAB1    <---------ANAC58 ------>MYB46(3)  --------->RVE1(1)   ----------->HVH21       --------->TOE2(3)       <---------ANAC58   accacaattcacaaaacgaaatatctcgttgacttcagggttgaccaattcattaaaattcaaacctatatgatgaccaatacaaattgcctgctcgagc  3341900       <---------ZAT18       --------->ZAT18    ---------->DOF2                                                                  ------>ZmHOX2a(1) --->ZAT2                                                              <---------ZAT18<---------TOE1(2) ----ZAT2                       ---------->DOF2                      <---------MYB52(1)      <------- ----At4g35610            ---------->DOF2                         <---------LBD16    --------->LBD16 --->At4g35610    ----------->GT1                               <-----------GT1     <---------LBD16   tggaaatagagcacaagaggtagtaaaataaagaaaaagaaaggttttgacatttgatgctggttttctccggttcgctcttaattcctgggtatttgat  3342000                                                          <---------ANAC46                                                          <---------ANAC58                                                    <-------TEIL                                                    ------>ZmHOX2a(2)                                              <---------HSFB2a(2)                                 <------MYB46(1)  <---------ARR14(2)                            <---------HSFB2a(1)   --------->ARR14(2)                    --------->ALFIN1       --------->GLK1(2)                  <---------ANAC46        <---------ARR14(2)                 <---------DEAR3(1)    <---------TOE2(3)  <---------ANAC58                <---------LBD16  <------MYB83 --------->HSFB2a(2)<---------HSFB2a(2)         --------     <-----------RAV1(1)<---------MYB46(3)<---------GLK1(2)      --------->HSFB2a(2)    <----------DOF2 <----------DOF2<---------ZAT14  <---------DEAR3(2)<------ZmHOX2a(2)           <------MYB46(1) --AHL20(2)     --------->ZAT14 --------->MYB59  <------ZmHOX2a(1)             <------MYB83  <-------   tcgctttgtgttgttctctgcggtgttggatagttcggttcaaggattctaggatccattgagtgttttagaaattcgatttggttctctcttttttaaa  3342100  Previous    Next  AGI:  At1g10180.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G49830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41978.1); similar to hypothetical protein MtrDRAFT_AC149576g13v2 [Medicago truncatula] (GB:ABN06034.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71443.1); contains domain PTHR21426 (PTHR21426); contains domain PTHR21426:SF2 (PTHR21426:SF2) Range:  from: 3338305    to: 3341610    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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