Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <---------At4g35610             --------->ALFIN1             <---------ANAC58           <------MYB83                   <---------ANAC58                                 --------->ALFIN1           <------MYB46(1)               =========================RAV                    <---------ANAC46           <---------ANAC46              <---------AtMYB61                              <---------AtMYB61          --------->MYB59                <-----------RAV1(1)   --------->ATHB51         <---------TOE2(3)          --------->MYB111(1)    <-----------GT1               <---------ICU4     <---------TOE2(3)    ---------->ID1 --------->ALFIN1    <----------DOF2   <------ZmHOX2a(1)        <---------TOE1(3) ----------DOF2 <---------AtMYB61--------->ZAT6       <---------LBD16             --------->DAG2<---- ----GT1  --------->MYB46(2)    <---------YAB1        <-----------RAV1(2)    <---------ETT(2)<-------   ttctttgtcgattaggtggaggtggaccaatgttatcactcctttggtgctggttctcaggagcattatttcttctatgtcgataaggttgaggtggacc  3337100                                                             <---------ANAC46                                                       <------MYB46(1)                                                       <------MYB83                                      <---------ARR11(3)    <---------TOE2(3)     --------->ZAT6                  <---------CCA1(2)<---------TOE2(3)     <-----------GT1             <----------DOF2      --------->MYB59        <-----------GT1    <---------YAB1             <-------TEIL       --------->ATHB12          <---------YAB1 -----ALFIN1        <---------MYB46(3)--------->ARR11(3)    <---------AtMYB61--------->ZAT6 <-------- --PCF5    <----------DOF2<-----------RAV1(2)    <---------YAB1--------->ALFIN1    <----------DOF2<--   actgttatcactcctttgatgctggttatcaggcgcattatatcttctatgttgattaggttgaggtggaccaatgttatcactcctttgatgctggtta  3337200                           <------MYB46(1)                           <---------ANAC46                      <-------GAMYB                           <------MYB83                         <---------MYB46(3)                          --------->MYB111(1)                  <---------ANAC46          <---------ARR11(3)    <---------AtMYB61              <---------AtMYB61                    <         <---------CCA1(2)--------->MYB46(2)                --------->ALFIN1                  -------     <----------DOF2      --------->MYB59                   <---------AtMYB61                 <------   <-------TEIL       --------->ATHB12                   <---------AtMYB61                   <------- -MYB46(3)--------->ARR11(3) --------->ALFIN1 <-----------GT1<---------MYB46(3)<------ZmHOX2a(1) ---- ---------RAV1(2)    <---------YAB1--------->ALFIN1    <----------DOF2  <------ZmHOX2a(1) <---------MYB52(1)   tcaggcgcattatatcttctatgttgattaggtggaggtggaccaatgttactactcctttggtggtggttataggacggaggaccagaagcgttatgct  3337300                                                                                <-------TEIL ----------DOF2                                                           ---------->DOF2    -------- -->At4g35610                                                          --------->ANAC58      -------- ---At4g35610              --------->ARR14(2)                          --------->ANAC58    <---------ALFIN1 ----RAV1(1)               <---------ARR14(2)                        <------ZmHOX2a(1) --------->MYB46(3) -->NtERF2     <------ZmHOX2a(1)                <---------GLK1(2) <------ZmHOX2a(1)   <---------At5g28300   gcctttgcagataaacaggacgggatgcagaaccagcatcaagggtttcagaatttctatctgtattaggaggaagcaaaggctcatttaccaccacgct  3337400                             --------->At4g35610                   <---------ARR14(2)                   --------->ARR14(2)              --------->HSFC1(1)              <---------HSFB2a(2)  --------->ATHB12              <---------CCA1(2)    --------->At4g35610  ------->MYC3                            ------>ZmHOX2a(1)        <---------GLK1(2)    <---------At4g35610  <-------MYC3<---------WOX13(1) --------->YAB1              <---------At4g35610   <-------TEIL  <------ZmHOX2a(1)<---------YAB1       <---------YAB1            ---------->DOF2    <  <--------P  --------->HSFB2a(2) --------->ICU4       <---------ATHB12      <---------ANAC46      -- ->ANAC58     <---------HSFC1(1)<---------At4g35610   ------>MYB46(1)     ----------->HVH21      <--- ->ANAC58  --------->GLK1(2) <---------At4g35610      ------>MYB83      ----------->RAV1(2)      <---   cgaggtagatgagtttctaggaatccacgtttgctgatgattgaatcgatgagacctatcatcgctcctatctcgcctgacttgaaagctcatattctgc  3337500                                 <-----------HVH21                                 <-----------TGA1                                --------->ANAC46                                --------->ANAC58                                --------->bZIP60(2)                          ------>ZmHOX2a(1)                        ------>ZmHOX2a(2)                       <------ZmHOX2a(2)                      <---------GLK1(2)                      <---------ARR14(2)                      --------->ARR14(2)                      <---------ARR11(3)                      --------->ARR11(3)                      --------->AGP1                  <---------ANAC58  --------->ANAC58          --- ---------WRKY18(1) ----------->ARR10 <-----------RAV1(1)               --------->ANAC58     -------- ------->WRKY38(1) ----------------------->TaNAC69(2) <---------ANAC58 --------->DAG2       --------- ------ANAC58   --------->AGP1  --------->ANAC58 <---------ATHB12     ---------->DOF2       <-------- ------ANAC58--------->ANAC46------->TEIL    ------------>CBF    ---------->DOF2            <--------   cttgactccacaaacacagaactagatcctgtacccgtcactgttggagcaatggtgcttctgtacaaaaagaaaagcaaatgagaaacattcagattct  3337600                                                               <---------ANAC55(2)                                                               --------->ANAC55(1)                                            --------->TOE1(2)  --------->ANAC55(2)                                            --------->ARR14(2) --------->ANAC58                                       --------->ANAC58        --------->ANAC46                                       --------->ANAC46     --------->TOE2(2)                                   <---------ALFIN1       ------>MYB46(1)                --------->REM1(1)   <-----------HVH21              --------->ZAT14         ------>MYB83     --------->ARR11(3) --------->CBF                   <---------ALFIN1        --------->WOX13(1)<---------ARR11(3) ->GLK1(2)                      --------->ANAC46 --------->ANAC58       <---------AHL20(2) >ARR14(2)               --------->AHL20(2) <---------ARR14(2) --------->ANAC58      <---------At4g35610 -ARR14(2)          <-----------RAV1(2)--------->ANAC58------------>CBF --------->AHL20(2) -GLK1(2) <------------CBF    <-----------GT1    --------->ANAC58  ------------>CBF  --------->At4g35610   agcaatgtcaaacattgatggcccagataaattcaccacacacgaaaatacgagcaaaccaatctacgtaacaataaaatcttacacagctacaacgatg  3337700                                                                                       --------->At5g28300                                                                                      ----------->GT1                                                                                     ----------->GT1                                                                                    <----------------                                                                           ------>ZmHOX2a(2)                                                                          <------ZmHOX2a(2)                                                                         <---------ARR11(3)                                                                         --------->ARR11(3)                                                                   <----------DOF2--------->DAG2                  <---------ATHB12                              ------>ZmHOX2a(1)--------->DAG2           --------->ANAC58                                  ------>ZmHOX2a(1)  ---------->DOF2           --------->ANAC58                    ------>NtERF2 ====================HOX2a_HOX2a         ---------->DOF2         <------------CBF            =====================HOX2a_HOX2a       -     <-----------GT1        ----------->GT1   --------->ANAC58  =================HOX2a_HOX2a        <    --------->AHL20(2)    ------->TEIL        --------->ANAC58  ==================HOX2a_HOX2a  ------   ttgaaattaactaaagccaaatcaaacgaatcgaaaattgatagcaagacgcctaaactattcctccttctttgggatctaaaaaagggggtaaaatcaa  3337800                                                  --------->ANAC58                                                  --------->ANAC46                                                  --------->ANAC58                                                <---------ALFIN1                                               ------>MYB46(1)                                              ----------->RAV1(1)                                             --------->AtMYB61                                             ------->GAMYB                                            --------->MYB46(3)                                            <---------MYB52(2)                                            <---------ATHB12                                            <---------MYB55(2)                                           -------->P                                           --------->ANAC58                                           ------>MYB83                                           --------->ANAC58                                           ------>MYB46(1)                                          --------->MYB55(1)                                         <---------MYB55(2)                                         --------->DEAR3(1)                                         <---------MYB46(2)                                         <---------MYB111(2)                                         --------->AtMYB61                                         <---------MYB111(1)              <---------CCA1(2)          --------->MYB46(3)         <-----------GT1             ------>MYB46(1)        <---------AHL20(2)           ------>MYB83------->GAMYB -----WRI1  --------->YAB1           -------->P------>MYB83                                         < -------->ZAT18                     ----------->RAV1(1)                                  ----------->GT1 ---------ZAT18                    --------->AtMYB61                                    ----------->GT1 ---->DOF2 <---------YAB1         --------->MYB46(3)                            ---------->DOF2     -   agtgccctattttatcatatctaagaaattttggtgaccaacaccaaccaacacacaaattttggcttcgatattgctgaatcaaagagaacgataaaac  3337900                                                         --------->ANAC58                                            ----------->HVH21                                           <---------MYB59                                          ----------->RAV1(2)       ---------->DOF2                       --------->ALFIN1   <---------At4g35610  ----------->GT1                   ---------->DOF2    <------MYB83    <---------ARR14(2)           --------->ZAT18----------->GT1 --------->At4g35610  <---------ANAC46         <---------At4g35610          <------MYB46(1) --------->ARR14(2)                          <--         --------->At4g35610         --------->MYB59---------->TaMYB80                  <------NtERF2 <---------ICU4   ------->GAMYB---------->DOF2      <---------KAN4(2)                  --------->LBD16 --------->ATHB12--------->MYB46(3)  --------------->AtSPL8---------->DOF2           <---------LBD16 -------->HAHB4 --------->ANAC58     --------->MYB46(2)--------->CCA1(2)           ------->GAMYB  --- ---------ATHB12--------->ANAC58     --------->MYB111(1) --------->ANAC58         --------->MYB46(3) -------->ICU4--------->MYB46(3)--------->DAG2<<<<<<<GRF7--------->ANAC46 ----------->GT1      ------   aaatgattagaagctcacaaccaaagagggggaaaaagtttggtacctgacaagaatatacgaaagcgtataaagaaggaaacaatcgccggaagaatca  3338000  Previous    Next  AGI:  At1g10170.1    Description:  ATNFXL1; transcription factor. similar to transcription factor [Arabidopsis thaliana] (TAIR:AT5G05660.1); similar to putative TF-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD46154.1); similar to hypothetical protein OsJ_019987 [Oryza sativa (japonica cultivar-group)] (GB:EAZ36504.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68247.1); contains InterPro domain Zinc finger, NF-X1-type; (InterPro:IPR000967); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, RING-type; (InterPro: Range:  from: 3333597    to: 3337493    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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