Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <----------DOF2                                      --------------->AGL15                                      <---------------AGL15                                     ----------------->AGL1                                    ---------->ID1                              <---------At4g35610                              <---------ZAT2                                     <-------TEIL                              --------->At4g35610                      --------->bZIP60(2)                              --------->ZAT2                           --------->ANAC58 --------->ANAC58                             ------->TEIL                              --------->ANAC46 --------->ANAC55(2) ---------->HVH21            --------->GLK1(2)                   --------->At4g35610    --------->ANAC58 -------O2               <---------TOE2(3)                       <---------At4g35610--------->ANAC46 ------>O2              <-----------GT1------>ZmHOX2a(1)--------->ATHB12<-----------HVH21 --GLK1(1)            <---------AHL20(2)               <---------YAB1  --------->ANAC58 --------->ANAC46   tcgtgaccaaaaattgttttgtattttaacgaagctgtgtccttttagagaacatatatgatttggaagctccaagtcacacatacacacacgtagttta  3310500                                                   --------->ATHB12                                                --------->YAB1                          --------->TOE2(3)    <------ZmHOX2a(2)                          --------->TOE1(3)   <---------ARR11(3)                          --------->YAB1      <---------ARR14(2)                        <---------TOE1(3)     --------->ARR11(3)                       <-----------GT1       <------ZmHOX2a(1)                     <---------YAB1 <---------AHL20(1)   ----------->HVH21         <--------P                  --------->ICU4    --------->AHL20(1) <---------MYB46(3)        <---------MYB46(3)                  <---------YAB1    <---------ARR11(3) ----------->GT1           <------MYB46(1)           <-------GAMYB<---------TOE2(3)  <---------TOE2(3)                     <------MYB83          --------->MYB52(2)        --------->ARR11(3)--------->ALFIN1  <---------GLK1(1)          <---------MYB46(3)       --------->YAB1 <---------YAB1------->GAMYB  <---------WOX13(1)  <-   gagaaaaattgtttgttgacattattaacgataacaaaaatatttgaggatcatgagtggtgacaacgacgttgatttcagattggttagtattcatttt  3310600                                                                    <---------YAB1     --------->TOE1(3)                                                               --------->YAB1         ----------->GT1                --------->ALFIN1                         --------->ANAC58             <---------ANAC46             --------->DAG2         --------->ANAC58     --------->ANAC46     <---------ANAC55(2)     --------->AtLEC2       <---------ARR14(2)           --------->ANAC55(2)  --------->ANAC55(2)    --------->TOE1(2)    --------->ANAC58                --------->ANAC58     ----------->GT1    --------->TOE2(2)    --------->ANAC58              <-----------GT1  --------->AHL20(2)     <-----   <---------ANAC58     <---------LBD16            --------->AHL20(2)--------->YAB1   <---------ANAC58   <---------ANAC58----------->HVH21--------->ANAC58<---------ICU4<---------ICU4      <---------ANAC55(2) ------GAMYB---------->DOF2 --------->ARR14(2)     --------->ICU4 --------->YAB1      <---------ANAC58   cggttacatgcgaaaaaagtggtgaccacggatactacaagcttcacatagaaatatttacgcattgataatgatataatatgtaataacgtgaaatctc  3310700                                            <---------ANAC58                                            <---------ANAC58                                            <---------ANAC46                                    --------->ARR14(2)                              --------->ANAC58                              --------->ANAC58                          <----------DOF2                              --------->ANAC46                   <-----------GT1                   --------->YAB1   <---------ARR11(3)     <---------DAG2        <----------DOF2 <---------ZAT6    <---------ICU4   <---------ARR11(1)     <----------DOF2    <-----------GT1       < ----------AGL15 --------->ARR11(3)<---------CCA1(2)<-----------GT1     <---------DAG2       <-------   ttagtggtattagtagaaaaatcatggtccataagccatatctatgacttgtagttacctccttttttctccaacttttttttctttctctagttatttt  3310800                  <---------AHL20(2)            <---------YAB1           --------->AHL20(2)           <---------AHL20(1)           <---------AHL20(2)    ----------->HVH21   ------>ZmHOX2a(2)  <---------At4g35610  --------->At4g35610  --------->CCA1(2)  <------ZmHOX2a(2) --------->AGP1  <---------AHL20(2)                                              <---------AHL20(2) <---------ARR11(3)                              <---------AHL20(2)              --------->AHL20(2) <---------AGP1 --------->YAB1                 <---------CCA1(1)                <---------AHL20(2) <---------ARR14(2)               --------->YAB1xxxxxxxxxxxxxxxx>smallRNA(i)    --------->AHL20(2) --------->ARR11(3)              <---------YAB1<---------RVE1(1)            <---------AHL20(2) --------->ARR14(2)           <---------YAB1  <---------ARR11(3)           --------->AHL20(2) ---------GLK1(1)--------->AHL20(2)           <---------GLK1(2)            <---------AHL20(2)   <---- --YAB1   --------->YAB1    --------->YAB1    --------->ARR11(3) ------->TEIL   <---------AHL20(1)   tgagatctgacattataattttaatttcaattttgatgatagtttgaagattttttttttttttttgaatctcacattttaatttaatttgagttttgat  3310900                     --------->ALFIN1                    <-----------HVH21                    <-------MYC3                    ------->MYC3                   --------->ANAC55(2)                   <---------ANAC46     --------->LBD16                   <---------ANAC55(2) --------->ANAC58                   <---------TGA1a     --------->ANAC46                   ============================================bZIP_DOF                   ==========================MYC_MYB                   --------->TGA1a     --------->ANAC58                   <---------O2       --------->MYB46(3)   <-----------ARR10                   --------->O2     --------->MYB52(1)     ------->TEIL                   --------->ANAC46 --------->ARR14(2)    <---------CCA1(2)                  --------                 <---------ALFIN1   <---------ARR14(2)<---------ANAC46                    ------>ZmHOX2a(2)                 ------------->DYT1 ------>MYB46(1)  --------->DAG2                  --------->At4g35610                <------NtERF2   *TSS------>MYB83    ---------->DOF2       <----------DOF2<------ZmHOX2a(2) -----YAB1      ----------->HVH21   -------->P   --------->AtLEC2<---------At4g35610 <---------At4g35610   gatatatactaaatgggcctcacgtgagggaagaagcctacccgctaattcatgtaaagtgtatctcagcacttgactttcagtctcagcgatcggagac  3311000                                                                            <---------ATERF1(1)                                                                            ------>NtERF2                                                                           ----------->HVH21                                                                          --------->ATERF1(1)                     <---------ANAC58                                     <------NtERF2                     <---------ANAC58                                    <---------DEAR3(2)                    <------NtERF2                                        ------>NtERF2                   ------>NtERF2                                         <---------ATERF1(1)                --------->ZAT2                                          <---------DEAR3(1)                ----------->RAV1(2)                                     <---------At1g77200                <---------ZAT2                                       <---------ANAC58                <---------At4g35610                                  <---------ANAC58                --------->At4g35610                              <---------DAG2             --------->At4g35610                               ------>MYB83--------->DEAR3(1)     ---             <---------ZAT2   <---------ARR11(3)             --------->DEAR3(1)          <-------MYC3             <---------At4g35610                            <---------At4g35610          ------->MYC3             --------->HSFB2a(1)                            --------->At4g35610       <--------------             <---------HSFC1(2)                           <-----------GT1<---------RAP2.3(1)      <--             --------->HSFC1(2)                    <-----------GT1<----------DOF2  <---------ARR14(2) --->HVH21   <---------HSFB2a(1)                <----------DOF2------>MYB46(1)     --------->ARR14(2)   ggagaagctcatggaagctgctggcgttacaagttctcatcttctctagtcttttacatttcacctccctttcgtcggcgacccaaatccacgttttggg  3311100                                                          <------ZmHOX2a(2)                                                         --------->AGP1                                                         <---------ARR14(2)                                                         <---------ARR11(3)                                                         <---------AGP1                                                         --------->ARR11(3)                                                         <-----------ARR10                                                         --------->ARR14(2)                                                        <---------CCA1(2)                                                    ------>NtERF2                                                   --------->ANAC58                                                   --------->ANAC58                                                   --------->ANAC46                                                  --------->SPL7                            <----------DOF2      <---------ATERF1(1)      <----------DOF2                           <---------ANAC58     --------->DEAR3(1)       <---------ANAC58   ------>ZmHOX2a(1)       <---------ANAC58   ------>NtERF2------>ZmHOX2a(2)  <---------AtLEC2     -- ------>GLK1(1)        <---------MYB52(1)    --------->ANAC58            <---------ANAC58        <--- ---AG        --------->YAB1<---------DAG2   --------->ANAC58           <-------TEIL        <-------- -------GLK1(1)   --------->GLK1(1)        <---------ATERF1(1)   <-----------RAV1(2)        ---------   aattcctccctaaaaatcagaaacccttggcttttccaacatggaagacgcctacgccagatctgtctcagaggtgctttgcatttctcttcccaatccg  3311200                                                                        <------NtERF2                                                                       --------->LBD16                                                                       <---------LBD16                                                                      <---------LBD16                                                                     <---------LBD16                                                                <---------At4g35610                                                           <---------YAB1                                                    <---------------AGL15                                                   ----------------->AGL3     --------->ARR11(3)                                      --------->CCA1(2)   <---------TOE2(3)   <---------ARR11(3)   --------->At4g35610               <---------ARR11(3) <---------AHL20(2)----------->GT1   <---------At4g35610               --------->ARR11(3)--------->AHL20(2)<---------DEAR3(1) ------->MYB52(2)     --------->GLK1(1)    --------->TOE1(2)    --------->At4g35610              <--- ------MYB52(1)      <---------ARR14(2)   <---------At4g35610   <---------STY1(2)<---------YAB1<----- -ARR14(2)           --------->ARR14(2)   --------->At4g35610   --------->STY1(2)--------->GLK1(2)<-- >ARR14(2)       <---------LBD16<-----------HVH21<------ZmHOX2a(2)  <---------ZAT2        <---------At4g35610   ttttttgctgagagttgttttcggatttgtaatctgtgagatatagctgcgatcccatataatgttagctagccgggggtgatattcttggcaactgttt  3311300                                                    <---------ARR14(2)                                                <---------WOX13(1)                                               <---------ANAC46                                              --------->ATHB12                                              <---------MYB46(3)                                          --------->ALFIN1                                        <------MYB83<---------GLK1(2)                                        <---------ANAC46                                        --------->ANAC55(2)                                        <---------ANAC58                                        <---------ANAC55(2)                                        <---------ANAC55(1)                                        <------MYB46(1)                                        <---------ANAC58                    --------->ATHB12        -                                       --------->MYB111(2)                <----------DOF2       -----                                       --------->MYB59                   <---------ANAC58       -----                                       --------->MYB111(1)               <---------ANAC58       -----                                       --------->MYB46(2)             ------->PIF5            -------                             <---------ZAT18 <---------YAB1          <---------At4g35610      <------                        <----------DOF2--------->MYB52(2)          <-----------RAV1(2)       -------- --------GT1      <---------ANAC58    <---------MYB55(1)       <---------ANAC46          <--------P-- -----DOF2      --------->ARR11(3)   <---------MYB52(1) <---------ANAC46<-------TEIL   <---------ANAC46 -------At5g28300 <---------ANAC58  <-----------HVH21--------->GLK1(2)<-------PIF5<----------DOF2 ---   tactgtgatggaagtgaatttcttgtctttgagccctctgttaggtgttgattggattctgtgttttgtgcaggtgcttgatttctttggggtagaccca  3311400  Previous    Next  AGI:  At1g10130.1    Description:  ECA3 (ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3); calcium-transporting ATPase/ calmodulin binding. Identical to Calcium-transporting ATPase 3, endoplasmic reticulum-type (ECA3) [Arabidopsis Thaliana] (GB:Q9SY55;GB:Q9SAV5;GB:Q9SMX2;GB:Q9SWS8); similar to ECA2 (CALCIUM-TRANSPORTING ATPASE 2, ENDOPLASMIC RETICULUM-TYPE), calcium-transporting ATPase [Arabidopsis thaliana] (TAIR:AT4G00900.1); similar to ECA1 (CALCIUM-TRANSPORTING ATPASE 1, ENDOPLASMIC RETICULUM-TYPE), calcium-transporting ATPase [Arabidopsis thaliana] (TAIR:AT1G07810.1); similar to calcium-transporting ATPase [Arabidopsis thaliana] (TAIR:AT1G07670.1); similar to Ca Range:  from: 3310932    to: 3322215    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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