Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <-----------HVH21     <----------DOF2                                  <---------ZAT18                               -  <---------ARR11(3)                                --------->ZAT2                 ----------->GT1 --  --------->ARR11(3)        --------->ANAC46        --------->At4g35610          ----------->GT1   -- ---->At4g35610             --------->ANAC58        <---------At4g35610      ---------->DOF2       <- ---->ZAT2                  --------->ANAC58     <---------At5g28300      <----------ID1           <- -----ZAT2           ----------->GT1            <-----------GT1        ---------->DOF2       -------- -----At4g35610  --------->DAG2          <---------At4g35610        --------->AHL20(2)      --------- -->DOF2        ---------->DOF2          --------->At4g35610    ------------------------>ANAC81  ----   ctgagaactttcagagcataaagtggtaacaagcaatggatttagctaagttacagctcacaagagaaaaataaaaaggaaaagagagaaaaaaaaaagt  3306400     <----------DOF2 <-------TEIL -------->ARR14(1) ------->ARR11(1) ------->ARR14(2) --------ARR14(2)                                                                          <--------- --------GLK1(2)                                                              ---------->DOF2      <- ->DAG2                                                         --------->ANAC58          <----------DOF2 ->DOF2                  ---------->DOF2       ------>MYB46(1)  --------->ANAC46       <---------ARR11(3) ------->ARR10--------->ALFIN1<-----------GT1  ------>MYB83     --------->ANAC58       --------->ARR11(3)   agattcgcttttaagagtgtgagagagcaaagtcactatctcataaaccaatctcttcagtttttcaagaaacaaaaaaaaaaagattagacctttcaca  3306500                                                                                                 ----                                                                                       <-------GAMYB                                                                                      <---------MYB46(3)                                                                       <---------ARR14(2)   <--------                                                                       <---------ARR11(3)  <---------ANAC46                           --------->ANAC58               --------->ANAC58           <---------YAB1                           --------->ANAC58               --------->ANAC58           <---------TOE2(3)     --------->ALFIN1  --------->ANAC58              <----------ID1    --------->ARR11(3)  <---------ANAC58  ------->TEIL         --------->ANAC58         --------->MYB52(1)     --------->ARR14(2)  <---------ANAC58 --HVH21             ---------->DOF2        <---------TOE1(3)          <---------GLK1(2)<--------P --------YAB1   <------ZmHOX2a(2)           <---------TOE2(3)   <-----------HVH21<---------GLK1(2)   tatgaatgtgtgtgtgagatcagagaagcaagaatttttgggaattaaggtaatggagacaagccctgttagagatactccaagattgtggttgctttgg  3306600                                                                                               ------                                      <------NtERF2                                            ------                                     <---------MYB46(3)                                        ------                                    --------->ALFIN1                                        <--------                                  <---------ANAC46            <---------MYB59               ---------     ----------->GT1              <---------ANAC58            --------->TOE1(3)             ---------    <---------------AtSPL8        <---------ANAC58            --------->TOE2(3)         ------------- ------>DOF2      >>>>>>>>>TBF1  <---------MYB46(3)   <---------ZAT6                    <------------ --DOF2    ---------->DOF2 <---------GLK1(2)      <---------ATHB12    --------->At4g35610   <--------   aaagagagagtacaaaagaagaagaatcaaattcttgggtggggagtttacaatcactgttaaacctaaatcagataaatgagggaagagatagtacact  3306700   ---------->DOF2 --->ANAC58                                                                    <------ZmHOX2a(1) --->ANAC58                                                                   <----------ID1 --->ANAC46                          <---------ANAC58                         ----------->GT1 -ZAT18                              <---------ANAC58                  <---------AHL20(2) >ZAT14                              <---------ANAC46                 --------->YAB1 >ZAT18                    <---------ANAC46                          --------->AHL20(2) -->AtSPL8                 <---------AtLEC2                      --------->AHL20(2) ---AtSPL8                 <---------ANAC58                ------------------------>ANAC81       <--- -ZAT14                    <---------ANAC58              ---------->DOF2     <---------TOE2(3)  <----   caattcaaagagtatcaaatgctgtttttgcttgaattggggtgaatgtagaatttttaaaaaggaatcaaataaaaatgaggaaaaaaaacgagagatt  3306800                                                                             <---------YAB1                                                                            <---------AHL20(2)                                                                            --------->AHL20(2)                                                                            --------->AHL20(1)                                                                            <---------AHL20(1)                                                                           --------->YAB1                                                                          <---------YAB1                  --------->MYB46(3)                                      --------->ICU4            <---------ANAC58                                            --------->YAB1            <---------ANAC46                                          --------->At5g28300            <---------ANAC55(2)   --------->YAB1                     ----------->GT1       ----------->GT1      --------->ANAC58                       <-------TEIL<------------CBF       <------MYB83 --------->ANAC46                              --------->CCA1(2)       <------MYB46(1)    *TSS  --------->ANAC58                 <---------ARR14(2)      --------->MYB59     ---------->DOF2                   ---------->DOF2<---------ICU4 --------GT1<---------ANAC58--------->ANAC58     <---------DAG2  --------->ARR14(2)               --- ---TEIL   --------->MYB52(2)   --------->ANAC58 <----------DOF2<------ZmHOX2a(1)  <---------ANAC46   caccaagttgggttacttgaacaaacaacaaagcaagcatcaagttcccaactttatagaatcaaaggatacagtaattataattgtgtttagtttaatg  3306900                                           <---------YAB1                                          <-                                         <-----------GT1                                          <--                                      <---------ICU4                                              ---                                     --------->ICU4                                             -----        --------->ARR11(3)    --------->DAG2                                 --------->MYB52(1)------    ---------->DOF2          ---------->DOF2                             --------->ZAT6        <-----   --------->AHL20(2)<----------ID1  <---------YAB1               <---------TOE2(3)          -------- --------->CBF  ---------->DOF2 <---------At4g35610               <---------TOE1(3) <------ZmHOX2a(1)   ggcaataaaagacctagagaaagagaacaaataaagctgataattaccatttaagagagagacttgttgaggttaacactaacagaggagacatattatg  3307000                                                                   <-----------GT1   <---------AHL20(2)                                             <---------YAB1   --------->AHL20(2)                                           --------->YAB1  --------->AHL20(2)                                            <---------ICU4 <---------YAB1                                                --------->ICU4     ------->TEIL --------ICU4                                                <---------ICU4       -------->P -------YAB1                                                 <--------HAHB4      <-----------GT1 ------>ICU4                         <----------DOF2        <---------YAB1   ------>MYB83 ---->YAB1                           <---------DAG2         --------->ICU4 --------->TOE2(3) --->ICU4                       <---------At4g35610       --------->YAB1   <---------MYB59<----------DOF2 ----YAB1              --------->MYB46(3)            <----------DOF2 --------->ANAC46   ------>ZmHOX2a(1) ->YAB1   ---------->DOF2       <---------ZAT2  <----------DOF2<---------YAB1------>MYB46(1)   attattaaaaaacaaagacagaacaactactgccaactgctttatttgctcttttctttttcattattattacacaacctaatctacctcctctttaaca  3307100                         <---------ANAC55(2)                       <---------AHL20(2)                                             <----------DOF2                       <-----------GT1                            <---------------AGL15                   <---------YAB1                <---------AHL20(2)             <---------ANAC58                 --------->YAB1                  --------->AHL20(2)             <---------ANAC58                <---------YAB1               <----------DOF2      --------------->AGL15             <----------DOF2             <-----------GT1         <-----------------AGL1          <-----------GT1--------->ANAC55(2)<---------DAG2     <-----------GT1 <---------------------     <----------DOF2<---------ICU4     <-----------GT1 --------->ZAT6      --------->ALFIN1     <---------DAG2--------->ICU4   <----------DOF2  <-----------GT1<----------DOF2   <---------DAG2   tgtctaactttttttcttttgataattacatgtcttaacttttacacctttttaattacactaattttccctttggggttttgcttcacttttttttttt  3307200                                                                      --------->ARR11(3)                                                                      <---------ARR11(3)                                                                    <-------TEIL                                                                    ----------->ARR10                                                                   <--------P                                                                 <------MYB46(1)                                                                 <------MYB83                                                                 <---------ANAC46                                                                --------->MYB111(2)                                                                --------->MYB52(2)                                           --------->ANAC46     <---------AtMYB61                                           --------->ANAC58     --------->MYB111(1)                                           --------->ANAC58     --------->MYB59                                    --------->AHL20(1)          --------->MYB46(2)                                  <---------AHL20(1)           <---------MYB55(1)                                  --------->AHL20(1)          <---------MYB52(1)               ------                 <---------ARR11(3) <---------ARR11(3)       <-----------HVH21        --------->YAB1   ---------->DOF2                <---------ARR11(3)         <-------GAMYB<-----------GT1     <------ ---ANAC81       --------->ARR11(3) --------->ARR11(3)   ------------>AtMYB77        <---------YAB1   ttcaacaaagaattgttgatatctatgtgagttcaatatatattcaagaaacaagaaggccacggttaggtagattttacattttctatgataaatctac  3307300  Previous    Next  AGI:  At1g10120.1    Description:  DNA binding / transcription factor. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT1G68920.2); similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT1G68920.1); similar to basic helix-loop-helix protein [Sesamum indicum] (GB:ABN51065.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 3304041    to: 3306826    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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