Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                 ----                                                                                                -----                                                                                                <----                                                     --------->ANAC58                           -----                                                     <---------ALFIN1                           <----                                                     --------->ANAC46                           <----                           ==========================================================================                           <---------------AGL15     --------->ANAC58                 <----------DOF2                     <---------ATHB12         <---------KAN4(1)                     --------->ZAT2---           <-------GAMYB   <---------YAB1     --------->HSFB2a(1)                   --------->At4g35610          --------->MYB55(2)                 <---------KAN4(2)                      <---------ZAT2---          <---------MYB46(3)              <---------YAB1                <---------ANAC55(2)     <----          --------->MYB46(2)              --------->ANAC58   ------>MYB46(1)<---------ANAC58    <----          --------->MYB52(2)              --------->ANAC58   ------>MYB83  ------->TEIL     ---------         <---------MYB55(1)--------------->AGL15   <---------ALFIN1    <---------TOE1(2)  --------->ANAC46        <---------MYB52(1)----------------->AGL2  ------>ZmHOX2a(2)    --------------->AtSPL3 -------     ------>ZmHOX2a(2) --------->KAN4(2)--------->YAB1     --------->AtMYB61<---------ANAC58<-------- <---------YAB1      <------ZmHOX2a(2) <---------ATHB12    <---------MYB111(1)      <---------At4g35610 ------>GLK1(2)<---------ANAC46      --------->WOX13(1) <---------ALFIN1--------->ANAC55(2) <--------   aatatgatccgttagttgagtcgatcattctaataagagcaatcacgaatgatccacaccacctacaatctcatacgtacttgtccagcttcactgcacc  3283800      --------->TOE1(3)   <---------ARR14(2)   <---------ARR11(3)   --------->ARR14(2)  <---------CCA1(2) --->MYB46(1) ----->MYB55(1) ---->MYB46(3) -----MYB55(2) ---->DEAR3(1) -----MYB111(2) -----MYB59 ======================MADS_MADS   --------->CCA1(2)                   ------>MYB46(1) ----->P                          <---------ARR11(3)                   ------>MYB83 --->MYB83              <---------CCA1(1)                            ------->GAMYB -----MYB46(2)         <---------ARR11(3)                            <---------ALFIN1 -----MYB111(1)        <---------ARR14(2)                            --------->AtMYB61 >ZAT14                --------->ARR14(2)                           <---------MYB55(2) >TEIL--------->TOE2(3)--------->ARR11(3)                           --------->MYB46(3) -ZAT18------>ZmHOX2a(1)<---------RVE1(1) ------->TEIL           --------->MYB46(3)                 < -ZAT14<---------------AGL15      --------->ARR11(3)           --------->ANAC46         <---------ETT(2)   taccatatccttaatttagttggcagatattatgtagatatatgtatatttcaacttggtgttctccacaaccacccatacatacaactttcgacaattg  3283900                                                                                --------->ARR11(3)                                                                            --------->YAB1                                                                            -------->HAHB4                                                                            <---------ICU4                                                                           <---------ATHB12                                                                           --------->ICU4          <-                            ---------->DOF2                               <---------TOE2(3)        <-                      <---------ANAC46                                  --------->AHL20(2)         <-                      <------MYB83                                      <---------AHL20(2)    -------                      <------MYB46(1)                                  --------->AHL20(2)    --------                     <------MYB83              ------>ZmHOX2a(1)   <------ZmHOX2a(2)    <------ZmHOX2a(1)                     <------MYB46(1)           ===========================HOX2a_HOX2a <---------TOE2(3) ----------ID1     <--------P                 --------->TOE2(3)    ============================HOX2a_HOX2a   atgagacaagtatacaaataggttgggttttaaagcatttagtactatcctaaatagaaacgagaagggatcatttaatgatgaccttgaggaaataaag  3284000                                                   --------------->AtSPL3                                                   --------->ZAT6                                                   --------------->AtSPL8                                                 --------->MYB52(1)                                              --------->ANAC58                                              <---------ANAC55(2)                            -------- --------MYB46(3)                             --------->ANAC55(1)                            <------- -----MYB83                                   --------->ANAC55(2)           --------->AtMYB61-------- -----MYB46(1)                                --------->ANAC46             --------->MYB46(3)<------- -->DAG2                                      --------->ANAC58     <---------YAB1    ----------->RAV1(1) -->DOF2             --------->YAB1    <-----------GT1        <----------DOF2<-----------HVH21<------   ttggtttgcatttagtttcccattgatatttatgtgaatagtgaccatacgtaactgtaccatacttttatgtttccaccatcagggcaacacaataaaa  3284100                                          <---------AHL20(2)                                      <---------ICU4                                      --------->AHL20(2)                                  <---------RVE1(1)                                      --------->ATHB51                                    <---------CCA1(1)                                      <---------AHL20(2)                                 --------->ARR11(3)                                     --------->ICU4                                      <---------ARR11(3)                             <-----------GT1                                  <---------CCA1(1)                          --------->ARR11(3)                      --------->ARR14(2)   <---------TOE2(2) ->AHL20(2)               <---------ARR11(3)                   ------------>CBF        <---------TOE1(2) --AHL20(2)           ---------->DOF2<---------YAB1        ------->TEIL       <---------RVE1(1) ->YAB1          --------->ANAC58  <--------HAHB4      ------->TEIL          --------->ARR11(3) --AHL20(1)      --------->ANAC58  --------->YAB1      --------------->AtSPL8<---------ARR11(3) ---AHL20(2)   ---------->DOF2    <---------YAB1      <---------AtLEC2   --------------------->WRI1   ttgaatgccatctaaaacaaagcaaaaagatttactataattattttcttactcatgcatgtactcccaatctcccatagatattttcgaaggtattttt  3284200                                                                                     --------->AtMYB61                                                                                     <---------ALFIN1       <-------TEIL                                                               <-----------GT1    <---------ANAC58                                                        <---------AHL20(2)    <---------ANAC58                     *TSS                              <---------ARR11(3)    <---------ANAC46                   ---------->DOF2                     --------->AHL20(1)   --------------->AtSPL3        --------->MYB52(1)                        <---------AHL20(1)  <---------DOF5.7(2)      --------->TOE2(3)                      ------>ZmHOX2a(1) --------->MYB46(3)   gtggtaacgtacaagtcttggcttcgtaatctaaataccgaaaaagaaaatgcctctaacttcccttcctctctctatatatttcaaccactctctgtct  3284300                                                                                       --------->AHL20(1)                                                                                       --------->ARR11(3)                                                                                       <---------AHL20(1)                                                       <---------ICU4                --------->ARR11(3)                       <---------ARR11(3)              --------->YAB1      <---------ATHB12                       --------->AHL20(1)           --------->YAB1        ------>MYB46(1)      <----------DOF2  <---------AHL20(1)  <---------ALFIN1          <---------ALFIN1<---------ARR11(3)    ------>ZmHOX2a(1)  --------->ARR11(3) --------->ANAC58           --------->REM1(1) <---------ARR11(3)    <---------------AGL15                 --------->ANAC58--------->YAB1  ------>MYB83--------->CCA1(2)   ctcttcctctttgtagtttctcaaatattttcttcagagttggcacgacctcattaataataatcttctctacacctatcaataagagatatattttaga  3284400                                                                 --------->TOE2(3)                                                                 --------->TOE1(3)                                                               -------->P                       --------------->AtSPL3               <---------ANAC58                  ---------->DOF2                           <---------ANAC58          <---------ZAT18                               <---------At4g35610          --------->ZAT18                --------->ARR14(2)<---------At4g35610          --------->ZAT14             <---------ANAC46 <---------DEAR3(1)                 <---------CCA1(2)          <---------ZAT14  --------->SPL7<---------ARR14(2)--------->At4g35610          <---------CCA1(2)    <----------DOF2    --------------->AtSPL8        <-----------HVH21       --------->MYB46(3)   ---   gtttcactttggtgcacaaacaaagctcgtacaacattcttcgtatatggctcttcgtcgctgcttacctcaatattcaacaacttcatcttatctctcc  3284500                                                                                                   <-                                                                                              <------                                                                                         --------->AHL20(1)                                                                                         <---------AHL20(1)                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(2)                                                <----------DOF2                         <---------AHL20(2)        <----------DOF2                       ---------->ID1                      --------->YAB1 <---      <---------TOE1(2)                   <----------DOF2                         --------->ANAC55(2)  <-------TEIL                          ---------->ID1                --------------->AtSPL3  -------  --------------->AtSPL8         <------------------------ANAC81  <------ZmHOX2a(1)     --------->AHL20(2)  --------------->AtSPL3 --------->YAB1<-----------GT1          <---------TOE2(3) <---------ANAC55(2) ------>ANAC46     <-----------GT1 <----------DOF2  <-----------GT1   --------------->AtSPL8  <------   aaggctcgtactttctccaatataccatcatactgttcttttttctttttcttttttctatacagtaaggaaactgtacaacttacataattttatttta  3284600                                                              <---------ANAC58                                                              <---------ANAC46                                                              <---------ANAC58                                                           <---------GLK1(1)                                                           --------->GLK1(1)                <-------GAMYB                                                          <---------ARR14(2)               <---------                                                      <---------LBD16                 <---------HSFC1(2)                                                    ------>ZmHOX2a(2)                 <---------At4g35610                                                   <------ZmHOX2a(2)                  --------->HSFC1(2)                                                   --------->CCA1(2)               <------NtERF2                                                  --------->AGP1                   <---------At4g35610         --------->YAB1                           --------->ARR14(2)               --------->At4g35610         ----------->GT1       <----------DOF2    <---------ARR14(2)               --------->ZAT2   --------->ANAC55(2)        <---------ANAC58    <---------ARR11(3)               <---------ZAT2 --------AHL20(2)      <---------ARR11(3)         <---------AGP1              --------->ANAC58  <---- ---AHL20(1)           --------->ARR11(3)         --------->ARR11(3)          --------->ANAC46  ----- ------YAB1        ---------->DOF2               <---------CCA1(2)            --------->ANAC58<------ -->AHL20(2)      --------->AHL20(2)    --------->YAB1--------->LBD16    <---------PCF2<---------GLK1(2) ---AHL20(2)   --------->YAB1 <---------ANAC58  ----------->ARR10   <---------AtLEC2  --------->At4g35610   tttttatgtaatagtaaaaataaaagacatttgctttgtttgtaataacacagatctggggatttcgtatgcatgggaccaaggcagcagcttctgttgt  3284700  Previous    Next  AGI:  At1g10060.1    Description:  ATBCAT-1; branched-chain-amino-acid transaminase/ catalytic. Identical to Branched-chain-amino-acid aminotransferase 1, mitochondrial precursor (BCAT1) [Arabidopsis Thaliana] (GB:Q93Y32;GB:O80597); similar to ATBCAT-2, catalytic [Arabidopsis thaliana] (TAIR:AT1G10070.2); similar to ATBCAT-2, branched-chain-amino-acid transaminase/ catalytic [Arabidopsis thaliana] (TAIR:AT1G10070.1); similar to branched-chain amino acid aminotransferase [Capsicum annuum] (GB:AAK57535.1); contains InterPro domain Aminotransferase, class IV; (InterPro:IPR001544); contains InterPro domain Branched-chain amino acid aminotransferase II; (InterPro:IPR005786) Range:  from: 3284241    to: 3287109    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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