Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <---------TOE1(3)                     <---------TOE2(3)        ---------->DOF2                <---------ICU4            --------->TOE2(3)       <---------AHL20(2)             --------->YAB1               <----------DOF2        --------->AHL20(2)            <---------YAB1          --------->YAB1        <---------ATERF1(1)          --------->YAB1          --------->AHL20(2)     <------NtERF2         --------->ICU4        --------->AHL20(2)        --------->ATERF1(1)        ------>ZmHOX2a(2)         <---------YAB1    <---------YAB1 --------->TOE1(3)------>NtERF2           <------ZmHOX2a(2)      --------->ICU4 <---------YAB1<---------AHL20(2)   <---------LBD16           <---------ARR14(2) ------ARR14(2)<---------YAB1--------->AHL20(2)      --------->ANAC58             --------->ARR14(2) ----->ARR14(2)--------->ICU4<---------AHL20(2)      --------->ANAC58       --------->ATHB12   attcagacatgatgatgataattaagattatttttatataataactttaaaagacaggcccggcccatttaatgtcaaagattggatccaagttttgccc  3278900                                              ----------->GT1                      <---------YAB1    --------->HSFC1(1)                                   --------                    --------->YAB1      <---------HSFC1(1)                       --------->AtMYB61                    <---------ICU4      <---------HSFB2a(2)                      ------->GAMYB                   <---------ATHB12     --------->HSFB2a(2)                  --------->MYB46(3)  ----            <-------TEIL               <---------LBD16                      <---------At4g35610  ----         --------->HSFC1(2)        <<<<<<<<<TBF1                            --------->At4g35610  ----         --------->At4g35610      <---------------AGL15           <---------DAG2--------->MYB46(3)         <---------HSFC1(2)       --------------->AGL15           <----------DOF2--------->TOE2(3)         <---------HSFB2a(1)     <-----------------AGL2        <-----------GT1 -------->P    --------  ---------->DOF2 ------->TEIL   <-----------------AGL1     <---------ICU4 --------->ANAC46----------   agagaaaaggaagcttcatgaatcatgagtttgtttcttcttctggaagagtcaaacaacaattttgacttttttatcagcaaccacaacgtcgaaagca  3279000           --------->AHL20(2)        --------->TOE2(3)                  <-----------GT1       <---------ICU4                      ---------->ID1       <--------HAHB4                   --------------->AtSPL8       --------->ATHB12                 <---------------AtSPL8                 <-------GAMYB       -------->ATHB1               <---------GLK1(2)                         <-----------RAV1(1)       --------->YAB1               <---------ARR11(3)                <---------WOX13(1)     ------->TEIL                   --------->ARR11(3)               <------------CBF ->ANAC58 --------->AHL20(2) --------->DEAR3(1)                     --------->ATHB12 ----->ANAC46                --------->TOE2(2)                     <---------YAB1          <--------- ----->ANAC58                --------->TOE1(2)                    <---------ANAC46   <---------GLK1(1) ----->ANAC58               --------->MYB46(3) <----------DOF2   <---------At4g35610 --------->GLK1(1) ->ANAC58<---------YAB1     --------->DEAR3(2)<---------DAG2 --------->ALFIN1 <---------MYB46(3) >DOF2<---------ATHB12    --------->MYB52(1)------->TEIL     <-----------RAV1(1)<---------MYB52(1)   cgacatgaatcattaaaaaaaaaaaaaaaaaccgacgagatttttgtacctttcttctccgaagtgttgctgattgatgtctgttggatttctctttctt  3279100                                                                          <---------DAG2                                                                          <----------DOF2                                                                 --------->AHL20(2)                                                                 <---------AHL20(2)                                                             <---------RVE1(1)            <---------WRKY18(1)                                                            <---------ARR11(3)           ----------->HVH21                <---------ZAT18                             --------->ARR11(3)           --------->WRKY38(1)         <----------DOF2                              <XXXXXXXXXXXXXXXXXXXXMIR1886.3     --------->WRKY12     <-----------GT1------>ZmHOX2a(1)              ---------->DOF2     <-----------GT1   --------->WRKY45 -DOF2  <---------DAG2                   <----------DOF2  ----------->ARR10            <-------GAMYB   caactaatcacctttctgtgtcctctcgcttctctcttctcttctttcccattcaaaggtgagatttttaatttgactttttttttttgggttgacccat  3279200                                                                                 <---------YAB1                                                                             ------>ZmHOX2a(2)                                                                            <------ZmHOX2a(2)                                                                           <---------ARR11(1)                                                                           <---------ARR14(2)                                                                           <-----------ARR10                                                                           --------->ARR11(3)                                                                           <---------ARR11(3)                                                                           <---------AGP1                                                       --------->ZAT14     --------->ARR14(2)                                             --------------->AGL15        <---------ARR14(1)                                             <---------------AGL15        <------NtERF2                                            <-----------------AGL2      <---------ANAC58                                       --------->AHL20(2)               <---------ANAC58                               --------->ATHB12    <---------------AtSPL8 <---------CCA1(2)     -----                        <-----------RAV1(1) ----------------->AGL3      <---------ANAC46       ------                       <---------TOE1(3)  --------->ARR14(2)           <---------LBD16       ------->TEIL       <-----------GT1 <---------TOE2(3)  <---------ARR14(2)    <---------At4g35610         ---------   ttcgaatttttatcatctactggttaatgttgttgatttgattatatccgaatttagtacaggctaagctcatggcggatcttaacattgtaatgaacgg  3279300                                                                       <---------At4g35610        <---------ANAC46                                               --------->At4g35610       <---------ZAT2                                       ----------->HVH21       --------->ZAT2                                     --------->At4g35610    <----------DOF2              --------->MYB46(3)       <---------At4g35610                    ---- ---->At5g28300          <---------GLK1(1)   <----------DOF2--------->WRKY12            <---------ZAT2 ----->GT1          --------->TOE2(3)  ----------->HVH21  ----------->RAV1(2)           --------->At4g35610 >MYB52(1)        ------->TEIL --------->MYB52(1)         ------>ZmHOX2a(1)             <---------At4g35610   tgacttctttgctgggattgaaccttggtatcccaacggatgtgaagcttttgtagtttcctctgacccatttagctcagaggtaatgtctgctgattcc  3279400           <-----------RAV1(1)                                                             <---------ZAT14       <-------GAMYB                                      --------->AHL20(1)    <---------HSFB2a(2)      <---------MYB46(3)                    --------->ANAC58                    --------->HSFB2a(2)      --------->MYB55(2)                    --------->ANAC58  <-----------GT1   --------->HSFC1(1)     <---------AtMYB61          --------->ANAC58          <---------AHL20(1)<---------ANAC46     --------->ALFIN1           --------->ANAC58          --------->ARR11(3)<---------ANAC58  <---------DEAR3(1)          ---------->DOF2             <---------ARR11(3)<---------ANAC58 -->ZmHOX2a(1) <-------GAMYB <------ZmHOX2a(1)<------ZmHOX2a(1)          <--------P        --------->ZAT14   tcgagcggtggttatgtcgttgtaactaataggaaagaaacttggcaaggacttgaacaagatattacaaccagggttgcttctggaatgaactatactg  3279500                                             <---------ARR14(2)                                             --------->GLK1(2)                                      <---------At4g35610                                      <---------ZAT2                         ------>ZmHOX2a(1)<---------TOE1(3)             <---------ANAC58         --------->At4g35610             <---------ANAC46         --------->ZAT2                                      --------->ARR14(2)             <---------ANAC58         ----------->RAV1(2)--------->ALFIN1                 <---------ARR14(2)           <------MYB46(1)          <-----------RAV1(2)<---------ZAT6              ------>MYB46(1)           <------MYB83  <----------DOF2  <---------TOE2(3)   <---------ANAC58     ------>MYB83   ---          <---------AtMYB61       ------->TEIL<-------TEIL    <---------ANAC58     -------->P     <--       <-----------RAV1(1)     <---------ATHB12 <----------DOF2                   ------>ZmHOX2a(1)   tatcaacttgtgttggtgtgtctggtcctttcaatgaatcagctgaggttctttctactgtgaggcttgagcatgaagactctcctaccgagtatttgtg  3279600                            --------->ARR11(3)                          --------->ALFIN1                            <---------ARR11(3)                        <---------ANAC46                           <---------CCA1(2)     <----------DOF2      <---------bZIP60(2)                      ----------->GT1      <---------WOX13(1)    <---------At4g35610   ---------->DOF2   <---------TOE2(3)   --------->ATHB12        --------->At4g35610 ------>ARR14(2)     <---------TOE1(3)  <---------AHL20(2)  <---------GLK1(1) -------ARR14(2)     <---------YAB1     <---------YAB1      --------->GLK1(1)       --------->At4g35610   tatcggaaagtatgtttttttttatggttatatctttgaaatttgattgagcttttgtagagatttctgatgaagtggaacttatctgcagaacatatgc  3279700                                                                                                 ----                   ------>ZmHOX2a(2)                                                             ====                 <---------AGP1                                               --------->PCF2    -----                 --------->ARR11(3)                                         <------MYB83        <----               ----------->ARR10                                            <------MYB46(1)     <----              <--------P                                                    --------->HSFB2a(1)------             <-------GAMYB                                                  --------->HSFC1(2) <-----            <------MYB83                                                    <---------HSFC1(2) <-----            <------MYB46(1)                                            <---------HSFB2a(2)     <-----          --------->ALFIN1                                       <---------------AGL15         ------        =============MYC_MYB                                     --------------->AGL15         <-----        --------->O2<---------HSFB2a(2)                         ----------------->AGL2       --------        ===============MYC_MYB                                  <-----------------AGL1  --------->LBD16        <---------TGA1a                     <---------ARR14(2)  <-----------------AGL2 --------->LBD16        <---------O2--------->HSFB2a(2)     --------->ARR14(2)  <-----------------AGL3<-----------RAV1(2)        --------->TGA1a      <---------HSFB2a(1)       ------>ZmHOX2a(2)    <---------HSFB2a(1)------    --------->CCA1(2)        --------->HSFB2a(1)   ----------->HVH21   --------->HSFB2a(2) ----------   ctcgagagacaagtgggttgatctggaaggaacgttttcgatatcaaatatgcctgatcgtgttgttctctatctggaaggtcccgctccagggaaagat  3279800  Previous    Next  AGI:  At1g10050.1    Description:  glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein. similar to glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G08160.2); similar to RXF12, hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G58370.1); similar to glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G08160.1); similar to putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] (GB:AAX33301.1); similar to hypothetical protein OsI_024977 [Oryza sativa (indica cultivar-grou Range:  from: 3279272    to: 3283484    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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