Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->ANAC58                                        --------->ANAC58                                       --------->SPL7          ----------->HVH21          <---------SPL7          ----------->TGA1          <---------ANAC58     <---------WRKY18(1)            <---------ANAC58    --------->WRKY38(1)            <---------ZAT18    ----------->HVH21       <------NtERF2  <-----------RAV1(2)                            <---------At4g35610    --------->WRKY12        --------->At4g35610                                <---------ANAC58    --------->WRKY45        <---------At4g35610                                <---------ANAC58   --------->DOF5.7(2)     <---------DEAR3(2)           ------->GAMYB --------->ARR14(2)  --------->At4g35610   <---------MYB52(1)     <---------RAP2.3(3)          --------->MYB46(3)   <----------DOF2  <-------GAMYB           <---------DEAR3(1)--------->LBD16         --------->HSFC1(2)    <---------ZAT2 --At4g35610--------->RAP2.6(3)---------->CDC5   --------->GLK1(1)  <---------HSFC1(2)    --------->ZAT2   agaccgttgaccatgacgactaggtgagtcggctcagtgcgttcgccagggaaatcaacagtcaaatcgacgtttccactttcgtctgattcagctctga  3278300                                                                                          --------->GLK1(1)                                                                                         --------->ARR14(2)                                                                                         <---------GLK1(2)                                                                                         <---------ARR14(2)                                                                                      <---------ANAC55(2)                                                                                      --------->ANAC55(2)                                          <---------ICU4                             <---------LBD16                           <<<<<<<<<TBF1  --------->YAB1                            --------->MYB52(1)              <----------DOF2    ---------->ID1                                    <---------SPL7              <---------DAG2     <---------CCA1(2)                                <---------ANAC58 --------->ANAC58       <<<<<<<<<TBF1    <---------YAB1                           <---------ANAC58  - --------->ANAC58    <<<<<<<<<TBF1   <----------DOF2  ------>ZmHOX2a(1)      <----------DOF2        <   gacaacccatccaatactttttcttcttcttcttcgtctctttatcatcactcttcctgcttctcatcttcttcatcttctttggcttacggattccttc  3278400                                                                       --------->MYB52(1)                 <---------ALFIN1                                   <---------ANAC55(2)             --------->ANAC46                                       --------->ANAC58             --------->ANAC58                                       --------->ANAC55(2)             --------->ANAC58                                       --------->ANAC46           <---------ALFIN1                 --------->ANAC46        --------->ANAC58 ==============================HOX2a_HOX2a  --------->ANAC58       <---------------------WRI1 <------ <------ZmHOX2a(2)                    <------ZmHOX2a(1)        <---------ICU4                 <------ -------->ARR11(3)                  <---------TOE1(2)     ------>ZmHOX2a(1)             ----------->GT1 ---------ARR11(3)      ------>ZmHOX2a(1)   --------->ANAC58   --------->YAB1   ----------->GT1     <   aagatcacttccaacacgcccatctccttctgtattcttaggaatcacgctatcttcttcctccatgatcacgaaacgaagaatgaaaaatggaaacttt  3278500                                         <---------ARR14(3)                                   <-------TEIL                                  --------->ARR14(1)                                 --------->ARR11(1)                                 <---------ARR14(2)                                <---------HSFB2a(1)                                --------->HSFB2a(1)                                --------->HSFC1(2)                                <---------HSFC1(2)<---------TOE1(2)                               <---------KAN4(2)  <---------AtMYB61                               ----------->ARR10  <---------TOE2(2)                           --------->HSFB2a(2)   <--------P                           <---------HSFB2a(2) <---------ANAC46                        <----------DOF2  --------->ARR11(3)                     <---------ALFIN1    <---------ARR11(3)                    <------NtERF2--------->ARR14(2)<------MYB46(1)    ----------->GT1 ----------------->AGL1     <---------ANAC58  <---------At4g35610--------------->AGL15     <---------ANAC58 ---DAG2          <---------ETT(2)--------->CCA1(2)<------MYB83            ---------->DOF2 ----DOF2         --------->RAP2.6(2)  <---------TOE1(2)<---------YAB1 --------->TOE2(3) -----------RAV1(2) <-----------------AGL1   <---------ANAC46         --------->YAB1   <-----------HVH21   atgcaggtgttaattcaaggtcgccactttgggaagattcgaaggtctcgcgtaggtttttatagacttcaaacatcaaaagttcaaatggtcagagaga  3278600                                                             --------->ANAC58                                <---------ALFIN1             --------->ANAC46                                ----------->RAV1(1)          --------->ANAC58                      *TSS                          --------->HSFB2a(1)         <-------GAMYB                     --------->At4g35610                          <---------HSFB2a(1)        <---------MYB46(3)                 <---------At4g35610                        ---------->DOF2         ----------------------->TaNAC69(2)      ----------->RAV1(2)                  <---------MYB52(1)        <-----------RAV1(1)              <----------DOF2   ------                <---------MYB46(3)--------->ANAC46  <------NtERF2  ----------->HVH21    =============   aacagagaatagtttcagtcgttagggaaagtccccacagaagtatttgttgtcgtcgttgaaacgccattgacattttctttcttacacatctgagatt  3278700                --------->HSFC1(1)                <---------HSFC1(1)                --------->HSFB2a(2)          --------------->AGL15          <---------------AGL15          <---------DAG2          <----------DOF2         <---------ANAC58             ---------->DOF2         <---------ANAC58    ------->MYC3         <---------ANAC46    <-------MYC3                             ----------->GT1            ----      <---------MYB52(1)----------->RAV1(1)                  <----------ID1                      <---    <-----------RAV1(1)--------->ANAC46                 <---------AHL20(2)                ---------->DOF2 --->CCA1(2)    <---------HSFB2a(2)  <---------AHL20(2)--------->AHL20(2)            ----------->GT1 ===============RAV<<<<<<<ZML2     <-----------TBP     <---------AHL20(2)           ----------->GT1   tggacactgttgctttttctagaacacaacacatgttatataaagtcattaacttgattaaatgagccaaaaatgtgatttggcataagttaaaaagcat  3278800                     <---------TOE2(3)                     <---------TOE1(3)        ---------->DOF2                <---------ICU4            --------->TOE1(3)       <---------AHL20(2)             --------->YAB1               <----------DOF2        --------->AHL20(2)            <---------YAB1          --------->YAB1        <---------ATERF1(1)          --------->YAB1          --------->AHL20(2)     <------NtERF2         <---------YAB1        --------->AHL20(2)        --------->ATERF1(1)        ------>ZmHOX2a(2)         --------->ICU4    <---------YAB1 --------->TOE2(3)------>NtERF2           <------ZmHOX2a(2)      --------->ICU4 <---------YAB1<---------AHL20(2)   <---------LBD16           <---------ARR14(2) ----->ARR14(2)--------->ICU4--------->AHL20(2)      --------->ANAC58             --------->ARR14(2) ------ARR14(2)<---------YAB1<---------AHL20(2)      --------->ANAC58       --------->ATHB12   attcagacatgatgatgataattaagattatttttatataataactttaaaagacaggcccggcccatttaatgtcaaagattggatccaagttttgccc  3278900                                              ----------->GT1                      <---------YAB1    <---------HSFC1(1)                                   --------                    --------->YAB1      --------->HSFB2a(2)                      --------->AtMYB61                    <---------ICU4      <---------HSFB2a(2)                      ------->GAMYB                   <---------ATHB12     --------->HSFC1(1)                   --------->MYB46(3)  ----            <-------TEIL               <---------LBD16                      --------->At4g35610  ----         <---------HSFB2a(1)       <<<<<<<<<TBF1                            <---------At4g35610  ----         <---------HSFC1(2)       --------------->AGL15           <----------DOF2--------->TOE2(3)         --------->HSFC1(2)       <---------------AGL15           <---------DAG2--------->MYB46(3)         --------->At4g35610     <-----------------AGL1        <-----------GT1 -------->P    --------  ---------->DOF2 ------->TEIL   <-----------------AGL2     <---------ICU4 --------->ANAC46----------   agagaaaaggaagcttcatgaatcatgagtttgtttcttcttctggaagagtcaaacaacaattttgacttttttatcagcaaccacaacgtcgaaagca  3279000           --------->AHL20(2)        --------->TOE2(3)                  ---------->ID1       <---------ICU4                      <-----------GT1       <--------HAHB4                   <---------------AtSPL8       --------->YAB1                   --------------->AtSPL8                 <-------GAMYB       -------->ATHB1               <---------GLK1(2)                         <---------MYB46(3)       --------->ATHB12             <---------ARR11(3)                <---------WOX13(1)     ------->TEIL                   --------->ARR11(3)               <------------CBF ->ANAC58 --------->AHL20(2) --------->DEAR3(1)                     --------->ATHB12 ----->ANAC46                --------->TOE2(2)                     <---------YAB1          <--------- ----->ANAC58                --------->TOE1(2)                    <---------ANAC46   --------->GLK1(1) ----->ANAC58               --------->MYB46(3) <----------DOF2   <---------At4g35610 <---------GLK1(1) ->ANAC58<---------YAB1     --------->DEAR3(2)<---------DAG2 <-----------RAV1(1)<---------MYB52(1) >DOF2<---------ATHB12    --------->MYB52(1)------->TEIL     --------->ALFIN1 <-----------RAV1(1)   cgacatgaatcattaaaaaaaaaaaaaaaaaccgacgagatttttgtacctttcttctccgaagtgttgctgattgatgtctgttggatttctctttctt  3279100                                                                          <---------DAG2                                                                          <----------DOF2                                                                 --------->AHL20(2)                                                                 <---------AHL20(2)                                                             <---------RVE1(1)            <---------WRKY18(1)                                                            --------->ARR11(3)           --------->WRKY45                <---------ZAT18                             <---------ARR11(3)           --------->WRKY12         <----------DOF2                              <XXXXXXXXXXXXXXXXXXXXMIR1886.3     --------->WRKY38(1)     <-----------GT1------>ZmHOX2a(1)              ---------->DOF2     <-----------GT1   ----------->HVH21 -DOF2  <---------DAG2                   <----------DOF2  ----------->ARR10            <-------GAMYB   caactaatcacctttctgtgtcctctcgcttctctcttctcttctttcccattcaaaggtgagatttttaatttgactttttttttttgggttgacccat  3279200  Previous    Next  AGI:  At1g10040.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61532.1); contains InterPro domain Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751) Range:  from: 3275893    to: 3278699    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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