Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---       --------->ANAC58                                                                         -----      ------>NtERF2                                                                             <----     <---------ALFIN1                                                                        <-------     --------->DEAR3(1)                                                                  ============   ------>NtERF2                                                                      <---------MYB52(1)  --------->ANAC58                                                                   --------->LBD16  --------->ANAC58                                                                 ------>ZmHOX2a(2)  --------->ANAC46                                                                --------->ARR14(1) --------->MYB46(3)                                                               <------ZmHOX2a(2) ------>ZmHOX2a(2)                                                                --------->CCA1(2) ---------ATERF1(1)                                                              <---------ARR11(3) ------ZmHOX2a(2)                                                                --------->ARR14(3) ------->ARR14(2)                                                                <---------ARR14(3) --------ARR14(2)                                                                <---------ARR14(2)<- ----NtERF2                                                                      --------->ARR11(3)<- ------>ATERF1(1)                                                                --------->ARR14(2)<- ------ATERF1(1)                                          ===============================HOX2a_HOX2a ------MYB46(3)       <---------DEAR3(1)               ==================================HOX2a_HOX2a- ----LBD16<----------DOF2                         <----------DOF2 ------>NtERF2  --------->AGP1 <---- ->DEAR3(1)         ------->PIF5      <-----------ARR10------>ZmHOX2a(1) --------->ZAT6  <----------DOF2 --DEAR3(1)         <-------PIF5      <---------ARR14(2)  ================================HOX2a_HOX2a --ATERF1(2)<-----------RAV1(1)       --------->ARR14(2)  ------>ZmHOX2a(1)     <---------GLK1(1) <-- -LBD16--------->ANAC58              <---------CCA1(2) ===================================HOX2a_HOX2a   ggatccgccacgctttgttgcacgagggcgaaatctcgcataacttctctctctttcctcctagtctccgacttaagactcgagatccggtctttctggt  3241200           --------->ATERF1(1)          <---------DEAR3(2)          <---------ATERF1(1)         <---------DEAR3(1)         <<<<<<<<<<DREB1A         <<<<<<<<<<DREB1B         <<<<<<<<<<DREB1C        --------->ATERF1(1)        --------->ALFIN1        --------->RAP2.6(3)     <---------AtMYB61  <-----------HVH21 <---------TGA1a <---------ANAC58 <---------ANAC58 <---------ANAC46 --------->TGA1a <------NtERF2 ------>ATERF1(1) ---->ALFIN1 -----DEAR3(1)                                               <---------ATERF1(1) ----RAV1(1)                                                 --------->ORA47(1) ==========bZIP_DOF                                          ------>NtERF2 --------ANAC58                                             --------->DEAR4(1)                ------- --------ANAC46                                             ----------->HVH21          ----------->GT1 --------ANAC58                                             --------->DEAR3(1)   <---------ANAC58 ----->NtERF2 <---------LBD16        --------->ANAC46       <---------ETT(1)     <---------ANAC46   - -----RAP2.3(3)     --------->ARR11(3)           <---------ANAC58                <---------ANAC58<--- ----NtERF2<------NtERF2<---------DEAR3(1)       <---------ANAC58   --------->AHL20(2)<------ZmHOX2a(1)   ggcgcgtgaggtcggccacggagacctcggtgagtttaaacacaagagaaggcttgaaatcgccgacccataaaataagtttagcgtaggagttaaacca  3241300                               <------NtERF2                              --------->LBD16                              ------>NtERF2                             --------->ANAC46                             --------->LBD16          ---------->DOF2    <---------DEAR3(1)                                                <-----      <---------At4g35610   <------NtERF2                                                      ------      --------->At4g35610   --------->ATERF1(1)         --------------------->WRI1             ------ <---------MYB46(3)     <-----------HVH21      <XXXXXXXXXXXXXXXXXXXXMIR399E                    <----- -->MYB46(3)----------->GT1 <---------LBD16   <------NtERF2                                    ------ -------->ALFIN1       --------->WRKY12--------->MYB52(1)                                      ------ ------DEAR3(1)        --------->WRKY38(1)  <---------DEAR3(1)                            <---------PCF5   cggtgggcagaagaaagtgaaaacgttgtccccggcgagggaaacggaggcgaatttctcttggtagtattgaagacagtgagatagaaactgggccacg  3241400                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                            ------>MYB46(1)                                                                                          ------->GAMYB                        <---------YAB1                                                   --------->MYB46(3)                       <-------TEIL                                              --------->ANAC55(2)                      --------->CCA1(2)                                    --------->TOE1(2)------>MYB83                      --------->ARR14(1)                                   --------->TOE2(2)-------->P ----O2              <---------ARR14(2)                             ------->GAMYB<---------ANAC55(2) --->ANAC58          --------->ARR11(1)                            --------->ANAC46    <-----------GT1 --->ANAC58          --------->ARR14(2) --------->ANAC46        <---------WRKY12 <---------ANAC46 ----TGA1a          --------->CCA1(2)   --------->ANAC58  --------->At4g35610 ----------->HVH21 --->TGA1a    --------->HSFB2a(2)       --------->ANAC58  <---------At4g35610<-----------HVH21------- --->O2       <---------HSFB2a(2)<-------TEIL        --------->ANAC46     ----------->RAV1(2)--------   agagattgttgttcttcgagagagatacgattagtttcatccaaggaagaagcacacataagctgttcaacgaaatacctgtgacggattaaccaaccat  3241500     --------->ARR11(3)                         <---------YAB1     <---------ARR11(3)                        <---------TOE2(2) >GAMYB                              <---------ANAC58 <---------------AtSPL8            ------->TEIL --MYB55(2)           <---------ZAT2 <---------ANAC58 --------------->AtSPL8          <---------ZAT14 --ATHB12             --------->At4g35610      <---------TOE1(2)                      <---------ZAT18 -->YAB1              <---------At4g35610   <---------ANAC58                        <---------------AtSPL8 ->MYB46(3)    <----------DOF2<---------ZAT6<---------ANAC58           --------->ICU4 --------->ZAT18   caacgaagatagtgaagctttgagagctgctagtgtttggcatgtttcttatgtttggagtactcactaagtaagtatggactgtgagtgtacgttgtgc  3241600                                                                                           ------>NtERF2                                                                                          ------>NtERF2                                                                                          <---------DEAR3(1)                                                                                          <---------MYB46(3)                                                                                         <---------ANAC46                                                                                        --------->ATERF1(1)                                                                                        <------NtERF2                                                                                        --------->At4g35610                                                                                        <---------At4g35610                                                                                       <---------ERF1                                                                                       <---------DEAR3(2)                                                                                       <---------RAP2.3(1)                                                                                      --------->ETT(1)                                                                                      <---------ANAC46                                                                                      <---------RAP2.6(2)                                                                                      <---------DEAR3(1)                                                                                      <---------RRTF1(3)                                                                                      <---------DEAR4(1)                                                     --------->AHL20(2)               <---------RRTF1(2)                                  *TSS --------->GLK1(2)            <---------DEAR3(2)<---------DREB2C(2)                                 --------->ANAC58    <---------AHL20(2)               <---------At1g77200                                 --------->ANAC58   <---------AHL20(2)                <---------RAP2.3(2)                            <---------WRKY18(1)     --------->AHL20(2)              <-----------HVH21                           ----------->HVH21    <------ZmHOX2a(1)  <---------DREB2C(2)<---------RAP2.3(3)                --------------->AGL15  <---------ARR11(3)         --------->DDF1   <-----------RAV1(1)               <-----------------AGL2  --------->ARR11(3) <---------TOE2(3)        --------->ALFIN1      --------->AHL20(2) <---------ANAC58     <---------TOE2(3) <-----------RAV1(1)----------->HVH21  ----------->GT1        <---------ANAC58 <----------DOF2<-----------GT1   <---------ETT(2)<------NtERF2   aagaatgtttatatactactacattgggcttgaccaagaaaaatcttttaggaattaatttacgatatgtcggtctatcgacgatgtgtcggcgggcgaa  3241700                                           --------->ZAT14                               <---------ANAC46                             <---------ZAT14                             --------->ZAT18                      <-------GAMYB                         <------NtERF2     <---------ZAT14<---------ICU4                            -                       --------->ETT(1)    --------->ZAT2 --------->ATHB12                          <                  <---------ANAC58         <---------ZAT2<---------YAB1                             <                  <---------ANAC58     --------->YAB1  --------->YAB1                               <            <----------DOF2  --------->ZAT14          <---------YAB1  <---------YAB1               --   atggatttttgtgacttttgtcttgtcggagtgaagtgtaatcagagcagcgtcttatcatcatttgctgttgttattcaactctggttttagaatcaag  3241800                                                               --------->ATHB12                                                               <---------AHL20(2)                                                               --------->ATHB51                                                               -------->ATHB1                                                      --------->TOE2(3)  <-----------GT1                                                    <---------YAB1    --------->YAB1           ----------->GT1                    --------->AHL20(2)     <---------YAB1 ---------->GT1                        <---------AHL20(2)     --------->ICU4 ---------ANAC46      --------->AHL20(2)     --------->AHL20(2)-------->HAHB4 ------MYB83          <---------AHL20(2)     <---------AHL20(2)<---------ICU4                  ------ ------MYB46(1)  <---------AHL20(2)    --------->AHL20(1)     <---------YAB1               ---------- ------->MYB59  --------->AHL20(2)     --------->AHL20(2)     <---------ATHB51       <----------ID1   ttgggttaaacaatagtataaaattttaatatggatgaaaataaaatataaattatccttggtaattattgattataacctatagaatcgacaaaaagaa  3241900                                                           --------->AHL20(1)        ----------->GT1                                                           <---------AHL20(2)    --------->AHL20(2)                                                           <---------AHL20(1)    <---------AHL20(2)                                                  --------->ARR11(3)            <---------AHL20(2)                                                  <---------ARR11(3)            --------->AHL20(2)                                                  --------->GLK1(2)          --------->YAB1                                                 --------->RVE1(1)          <---------AHL20(2)                                              --------->YAB1--------->AHL20(2)  --------->YAB1 ---->DOF2       <---------AHL20(2)          --------->AHL20(2)             <---------YAB1 >DOF2        --------->GLK1(2)       <---------ZAT6    --------->AHL20(2)--------->YAB1   <---------CCA1(2)   agactataacctagagaatttttttttttttttaaaacaagtgttcattaaaaatctttaaaatatttagtctgttttataattaaaatgtttatatctg  3242000                                               <-----------HVH21                                            >>>>>>>GRF7                                         <-----------HVH21                                         <-                                        ----------->HVH21                                          --                                     <---------ARR11(3)                                          ----          --------->ZAT6             --------->ARR11(3)                  <---------MYB59         ----       --------->WOX13(1)           <---------CCA1(2)               <---------KAN4(2) ----------->HVH21    ------->TEIL                <---------AHL20(2)              <---------TOE2(3)   --------->At4g35610   <---------CCA1(2)            --------->AHL20(2)           <---------YAB1  --------->YAB1  <------ZmHOX2a(1)   aaattgtatctatcactactagttccagttggaattatatatctgtcagggtcgcatctcgatattatggaatgacctaaaataacatctgaagaggaaa  3242100  Previous    Next  AGI:  At1g09950.1    Description:  transcription factor-related. similar to ZW2 [Arabidopsis thaliana] (TAIR:AT1G58330.1); similar to predicted protein [Gossypium hirsutum] (GB:AAT64037.1) Range:  from: 3240608    to: 3241634    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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