Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       --------->ANAC58                                                             --------->ICU4                          ----------->GT1                    <---------ZAT6           <<<<<<<ZML2  --------->DAG2                   --------->ZAT14        --------->HSFB2a(2)----------->GT1               <---------ZAT14        <---------HSFB2a(2)<----------ID1            --------->TOE1(2)               --------->ANAC58 --------ARR11(3)      ---------->DOF2               --------->TOE2(2)        <---------MYB52(2) --------AHL20(1) <---------YAB1      --------->YAB1----------->RAV1(2) --------->GLK1(2)           < -->At4g35610  <---------YAB1    --------->AHL20(2)------->TEIL      --------->ANAC58--------->ANAC58   atatattcacctagaacattataaaaaaagggaaaaaaaatcagaaaacattgaacctgagtagtgatgacaagaatccaactagccaagaaactaatct  3229600                                                        ----------------->AGL2                                                       <------ZmHOX2a(2)                                             --------------->AtSPL3                                             --------------->AtSPL8                <---------ICU4              --------->At4g35610    ----------->RAV1(1)                --------->YAB1             --------->ANAC58 <---------ARR14(2)                   <---          --------->ANAC58                 --------->ANAC58 --------->ARR14(2)                <------          --------->ANAC58           ------->GAMYB    <---------ARR11(3)                  <------ZmHOX2a(2)        ---------->DOF2            ------>MYB83       --------->ARR14(2)                 <---------ARR11(3)   --------->YAB1 <---------YAB1   ------>MYB46(1)    <---------ARR14(2)          --------->YAB1 ---- ----------DOF2--------->ICU4     --------->MYB52(1)  --------->AGP1  ----------->RAV1(1)--------->ARR11(3)   tccttttataaaaagccatgatgatatcaacaataccaacagcgtaagcagtaccagatccaaatccagcaccagcattagcaaacatagagatcaacac  3229700                                                       <---------YAB1                                                   --------->TOE2(3)                  <---------ARR14(2)             ------>MYB46(1)       <---------TOE2(3)                         ------>MYB83     ----------->TGA1                         --------->MYB46(3)     ----------->HVH21                    --------->ANAC46                                       ----   <---------ANAC58   --------->LBD16     <---------MYB52(2)                  --------->ANAC58 ------   <---------ANAC58 <---------LBD16       --------->ANAC58                    --------->ANAC58------- ----MYC3   ---------->DOF2               --------->ANAC58         --------->ANAC58   <---------HSFC1(2) ---ALFIN1--------->DOF5.7(2)            <---------TOE1(2)         --------->ANAC58   --------->HSFC1(2) --->MYC3--------->TOE2(3)  ---------->DOF2  ------->TEIL        <-----------RAV1(2)  --------->At4g35610   atgttccttgacgttaaagggacccggattaaaagaaaactcccacgaaccaatcttatacttggtctcaggcaaaaccctagccataagcttccctaaa  3229800                                  --------->At4g35610                                  <---------YAB1                                --------->YAB1                               --------->ICU4  <---------ANAC55(2)          <---------YAB1  --------->ANAC58          <---------ZAT6  --------->ANAC55(2)  --------->YAB1                       ---------->DOF2  ----------->GT1     <---------YAB1                    --------->LBD16  --------->ANAC58    <------ZmHOX2a(2)             <---------ARR14(2) ----->ANAC46        --------->ARR11(3)             --------->ARR14(2)         ----------->GT1  ----- ---->DOF2           <---------ARR11(3)             ------->TEIL--------->ALFIN1<------ZmHOX2a(1) --->DOF2           --------->GLK1(1)              <---------CCA1(2)    --------->CCA1(2)       -----   ggcaacgtaacaacttgaacagagatcatagtgatcatcagaggctgagttctgtatccgaagaaagtgttgagaaacgagaggagaatacaagagagaa  3229900                                                                                      <-------TEIL                                                <---------MYB46(3)                  --------->ARR14(2)                                        --------->ARR11(3)                          <---------ARR14(2)                                        <---------ARR11(3)                       --------->LBD16                                        <---------ARR14(2)                     --------->DEAR3(1)                                      --------->HSFC1(2)                       <---------LBD16                         <---------ALFIN1    <---------ANAC46                 <---------LBD16                        <---------ZAT14 --------->ARR14(2)                  <---------ALFIN1                  <---------HSFC1(2)  <---------HSFC1(2)                --------->At4g35610     <-----------GT1   <---------ALFIN1<------ZmHOX2a(1)             --------->HSFB2a(1)         <--- ---->ANAC58      --------->HSFC1(2)  <---------HSFB2a(1)            ----------->RAV1(2)<-----------TGA1 ---->ANAC58  --------->ANAC46 <--------P ------>ZmHOX2a(2)         ------->TEIL--------->LBD16  <---   gccctaaaaaccacatccgaaacgtccacactggtagagaaggatcgtcgtggttcgatacagtgagacgaacctgctccaccggggattcgtcatcgtc  3230000                  <---------ANAC58                                                           --------                  <---------ANAC58                                                          <--------                  <---------ANAC46                                                         --------->bZIP60(1)                --------->LBD16                                                            --------->TGA1a            ------>ZmHOX2a(2)                                                              <---------TGA1a           <---------GLK1(1)                                                               --------->O2          --------->ARR11(3)                                                               --------->TGA2(1)          <---------ARR11(3)                                                               <---------O2        --------->WRKY12                                                                   <---------bZIP60(1)      <-------GAMYB                                                                        --------->bZIP60(2)     <---------ANAC46                                                                      <---------TGA2(1)     <---------DEAR3(1)                                                                    ==========  <---------DEAR3(1)                           <-------GAMYB   <---------TOE1(3)       --------->ATERF1(1) <---------At4g35610                          <-----------RAV1(1)                   <------ZmHOX2a(1) --------->At4g35610                          --------->MYB52(2)             <------MYB83 <---------- --------TGA1   ------>NtERF2                 <---------MYB46(3)<---------ZAT6 <---------REM1(1)    < --------HVH21<---------LBD16        ------>NtERF2       --------->GLK1(1)   <------MYB46(1)<--------   gtcatcggcgttgatctccggcttgtgtaattcaatcgcagccattgtttgttgtggcgaaatctagggttatggaatttggtgaaggagacgacgtcag  3230100                                                                 <---------AHL20(2)                                                                 <---------AHL20(1)     <---------YAB1                                   ------->TEIL                  --------->AHL20(1)  --------->GLK1(2)                                   --------->ARR14(2)           --------->YAB1 ------>ZmHOX2a(2)                                   --------->GLK1(2)            --------->AHL20(2)  --------->ARR11(3)                                   <---------ARR14(2)           <---------AHL20(2)  <---------ARR11(3)                              ----------->GT1     <---------ARR11(3)          --------->CCA1(2)                              <---------ANAC46    --------->ARR14(2)          <------ZmHOX2a(2)                              <---------ANAC58    <---------ARR14(2)         --------->ARR14(2)  <------------CBF            <---------ANAC58    <-----------ARR10          <---------AGP1 ->TGA2(2)                   <-------TEIL         --------->GLK1(2)          --------->AGP1 ---TGA1             ---------->DOF2  ----------->GT1          --------->ICU4<---------ARR11(3) ===============================bZIP_DOF          --------->ARR11(3)         <---------ARR14(2) -STF1     --------->GLK1(2)--------->GLK1(2)    <---------GLK1(2)           --------->ARR11(3) ---------YAB1    ----------->TBP <---------CCA1(2)  <----------DOF2        <---------GLK1(1)       < ---HVH21<------ZmHOX2a(1) <---------GLK1(2)  --------->YAB1 <---------ICU4 --------->GLK1(1)  <-----   tgaatattggaggaatctttataaaaagagattcgtgaatctgttaaatgagaatctttttagtaattatattttcagagatctgagattttgatttatc  3230200                                                                    --------->LBD16                                                                    ------>NtERF2                                                                   --------->ANAC58                                                                   --------->ANAC58                                                                   <---------ALFIN1                                                                   --------->DEAR3(1)                                                                   --------->ANAC46                              <---------YAB1               <---------MYB52(1)              <---------YAB1                     <------ZmHOX2a(1)                   --------->ANAC58        ----------->GT1             --------->AHL20(2)                          --------->ANAC58  ---------->DOF2--------->TOE2(3)             <---------AHL20(2)-------->HAHB4            --------->ANAC55(2)    ----------->GT1         --------->ICU4  ----------->GT1                 --------->ANAC46<----------DOF2  --------->YAB1        --------->AHL20(2)    --------->ICU4             --------->ANAC55(1)    --------->LBD16------ ---------WOX13(1) <---------TOE2(3)                     <---------ANAC55(2)  <---------LBD16<------- ----At4g35610<---------AHL20(2)         <-----------RAV1(1)      <---------LBD16<<<<<<<<<<E2Fb<-----   tgatagacataaaaattaaataaggaagagtaattatcgaaatttgttgcaaacaaaacacgttattccccgcctctttaagcgggaaataatcttattg  3230300                                        --------->YAB1                                 ---------->DOF2               <---------TOE2(2)                               <---------YAB1                  <---------TOE1(2)                            <---------YAB1       <-----------GT1      <-----------GT1 --------->AtSPL8           --------->ICU4    --------->YAB1 <---------At4g35610                  <-- -----CBF           <-----------GT1    >>>>>>>>>MYB98       --------->MYB52(2)              <-------- ----------AtSPL8  <-----------GT1<---------TOE2(3)        --------->ZAT18     --------->YAB1     <--   gtacttactaatgtgttttttttaacagttattattaaagtaacataattttaacccgatgttcgctggtttttacttaaatgaaaattgatatttatga  3230400                                                               <---------AHL20(2)                                                               --------->AHL20(2)                                                            <--------ATHB1                                                            <---------ICU4                                           <---------ICU4   -------->HAHB4                                           --------->YAB1   <--------HAHB4                                          <---------ATHB12  --------->ATHB51                                --------->ANAC55(2)        <---------ATHB51                                <---------ANAC55(2)        <---------YAB1                                --------->ANAC46         --------->YAB1                           --------->ARR14(2)           <---------YAB1    --------->ATHB12       <-----------ARR10          --------->YAB1                  <----------DOF2 --------DOF2              <---------ARR11(3) <---------ICU4--------->YAB1       ---------->DOF2 -ICU4                     --------->ARR11(3)<---------YAB1--------->ICU4  ---------->DOF2 -------DAG2        <---------LBD16     --------->WOX13(1) --------->AHL20(2) <----------ID1   ctttattcattaggcattgttttcggcaatatctacgtgattcaatcatcattttttcataataattaaaaaaaaaaaaaaggaaaagcttttatatcat  3230500  Previous    Next  AGI:  At1g09930.1    Description:  ATOPT2 (oligopeptide transporter 2); oligopeptide transporter. Identical to Probable oligopeptide transporter 2 (OPT2) [Arabidopsis Thaliana] (GB:O04514); similar to ATOPT4 (oligopeptide transporter 4), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT5G64410.1); similar to ATOPT7 (oligopeptide transporter 7), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G10770.1); similar to ATOPT8 (oligopeptide transporter 8), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT5G53520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67821.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61570.1); similar Range:  from: 3227492    to: 3230045    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g09932.1    Description:  phosphoglycerate/bisphosphoglycerate mutase-related. similar to phosphoglycerate/bisphosphoglycerate mutase family protein [Arabidopsis thaliana] (TAIR:AT2G17280.1); similar to phosphoglycerate/bisphosphoglycerate mutase family protein [Arabidopsis thaliana] (TAIR:AT2G17280.2); similar to phosphoglycerate mutase-like protein [Glycine max] (GB:AAG38144.1); contains InterPro domain Phosphoglycerate mutase (InterPro:IPR013078) Range:  from: 3230452    to: 3233111    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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