Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        ----------->GT1     <---------ARR11(3)    <---------ANAC46     --------->YAB1 >GLK1(2)                  ----------->GT1    --------->AtLEC2                    <-----------GT1 -AGP1                     <---------ANAC58   --------->ANAC58                 --------->YAB1 >ARR11(3)                 <---------ANAC58   --------->ANAC58            <---------ATHB12 -ARR11(3)              --------->DAG2       --------->WOX13(1)         --------->WOX13(1)        --- >ARR14(2)            ---------->DOF2      --------->WRKY18(1)    <---------MYB52(1)         ------>ZmHOX2a(2) -ARR14(2)      --------->MYB52(1)     <---------MYB52(1)         --------->ARR14(2)     ----------->HVH21   tagaacaggtcttaaaacaaactgaaaaggcgtttatttccgatagtcaagcaaaatggtttatttccgatattcaatcaattgtaactctgtgatcgtt  3224100                                              --------->YAB1                                             <---------ATHB12                        --------->ANAC46   <---------GLK1(1)        --------->ANAC58              <---------HSFB2a(2)          --------->GLK1(1)        --------->ANAC58      -----------              --------->HSFB2a(2)   <---------ZAT14             <---------MYB52(2)      ---------->DOF2          <----------DOF2           --------->ZAT14          <----------ID1          --------->ANAC58 ------->DOF2<---------LBD16       ----------->HVH21     ---------->DOF2             --------->ANAC58   taaagtcccttcctttctggatttatacgtagacccagtgaagggaaatcatctttcaacaaagaaacaaacccaatttgatgaaacaaggaaagaaaaa  3224200                                                                                            ---------                                                                                           <---------MYB52(1)                                                       <---------LBD16                    <-------GAMYB                                                      <---------LBD16                     ===========   <---------At5g28300                  <---------At4g35610                    <-----------HVH21    - <---------ZAT14                       <---------TOE1(3)                    --------->At4g35610------ --------->ZAT14            <----------ID1     <-----------GT1              <---------At4g35610<----- >GT1                 ----------->GT1  <---------TOE2(3)--------->LBD16  <----------DOF2 <---------ANAC46   cagtttacagtgtcataaaaaatgaagtaaacaacaaatttaagcttatttactaatccgggctaaaaatacaaactttgctgtcacaatttcgttgagc  3224300                                                                                         <---------ANAC46                                                                                        <------NtERF2                                                                                       <---------ATERF1(1)                                                                                       ------>NtERF2                                                                                      <---------ATERF1(2)                                                                                      --------->ATERF1(2)                                                                                      <---------DEAR3(1)                                                                                     <---------ANAC46                                                                                     <---------ANAC58                                                                                     <---------ORA47(1)                                                                                     --------->ATERF1(1)                                                                                     <---------ANAC58                <---------TGA1a                                                     <---------ATERF1(1)     <-----------GT1                                                                <------NtERF2 >WRKY38(1)     --------->TGA1a                                                   <---------RAP2.6(2) =========================MYC_MYB                                               <---------MYB46(3) -------->TOE2(3)                                                              <---------AtMYB61 --->At4g35610  --------->O2                                                   --------->ALFIN1 ----At4g35610  <---------O2       <------ZmHOX2a(1)          <--------P   <---------At5g28300-------   agcctaaaaaccattctcaagtgagagaaattcaagaggatgaagaaaccatgagaagagaagggtagacgagaaatcacagtggtggccggcgtttaaa  3224400                                         <---------GLK1(2)           ----------->GT1       <------ZmHOX2a(2)       <---------ICU4           <---------ARR14(2)       --------->ATHB12         <-----------HVH21                           --------->DEAR3(1)      <---------YAB1            --------->ARR14(2)                       --------->DEAR3(1)      --------->ICU4         <------NtERF2            <---------ARR14(2) --------->AtMYB61    --------->YAB1        ==============HOX2a_HOX2a   --------->ARR14(2) <---------ALFIN1 --->DOF2<---------YAB1   <------ZmHOX2a(1)       <---------ICU4        --------->MYB46(3)   gcggtttcatgattagtaaaacgatgaaggagccgatcagccagtttcttcatcagtattcgacccaagtgatcaccaccgaagcccagagagagagaga  3224500                                            --------->MYB52(2)                                            <---------MYB46(3)                                           *TSS ---------->DOF2                                          <---------MYB52(1)                                        <---------ANAC58                            <---------MYB52(1)                                        <---------ANAC58                    --------->ANAC58                                      <---------DOF5.7(2)      <---------ANAC46   <---------ANAC46                                    <---------MYB52(1)         <---------ANAC58   <---------ANAC58                                    --------->DOF5.7(2)        <---------ANAC58   <---------ANAC58---                                   <----------DOF2     <----------DOF2      --------->ANAC58      ---   gagagagagagagagagagagagagagagagagactgcgttagcgtttgttaaagcgcttctgtgccttggtttaggcacgactgcgtttgtcaactctc  3224600                                      ------>MYB46(1)                                      ------>MYB83                                      --------->MYB52(1)                                    <---------MYB59                                       <---------GLK1(1)        <----------DOF2             ------->GAMYB                        <---------------AGL15      <---------ANAC58              --------->AtMYB61                    --------------->AGL15    <--      <---------ANAC58             --------->MYB46(3)                 <-----------GT1     --------->GLK1(1)  <------------CBF                -------->P                    <------MYB83       --------->GLK1(1) ------>ANAC58                   --------->WOX13(1)             <------MYB46(1)    <---------GLK1(1) ------>ANAC58        <---------AHL20(2)     ----------->GT1   --------->MYB59---------->DOF2   <----   aaggcattgcctttgcattcagttttaattcttatcaaccaaaccgaatgtaatttgattttagtttggttttaactccaaaaagaaatctgaaatctct  3224700                      --------->ANAC58                      --------->ANAC58                  --------->ANAC58                  --------->ANAC58                <----------DOF2                  --------->ANAC46             --------->GLK1(2)        --------->AHL20(2)            <---------At4g35610                                  <--------- -------AHL20(2)---------->DOF2       --------->ZAT2                          <----------DOF2      -- ------DOF2 --------->YAB1            --------->At4g35610                <--------P  ----------->GT1-   tttattgaaatcaaatataaaagcaagtctcatggtgatcagctcaaacaatcttttggggtttctcttgtctgggtaagctttaaaatgtataaaccct  3224800                                                               <---------REM1(2)                                                            ------>ZmHOX2a(1)                                                         ------>NtERF2                        ------>ZmHOX2a(1)                                                        --------->DEAR3(1)                <---------ARR11(3)                                                      ------>NtERF2                       --------->ARR11(3)                  <---------ARR14(2)                 --------->ANAC58                     <---------ARR14(2)     --------->ARR14(2)                              --------->ANAC58                     --------->ARR14(2)     <---------ARR14(2)                              --------->ANAC46        <---------HSFB2a(2)   <-     --------->GLK1(2)                               <---------ALFIN1        --------->HSFB2a(2) ----    <---------GLK1(2)  <---------TOE2(3)             --------->REM1(1)      <---------LBD16<------ZmHOX2a(2) --GT1      ----------->HVH21   <-----------GT1 --------->ANAC58           =======================HOX2a_HOX2a ------->TOE2(3)  --------->ARR14(2)            --------->ANAC58           ------>ZmHOX2a(1)------>ZmHOX2a(2) ----->ZmHOX2a(1)<------ZmHOX2a(1)              ----------->ARR10          ========================HOX2a_HOX2a   tccttagaatctgtctgaaggatttgaggcaaatttacagaattacagataagctacgcctcctctactcaggcttcctctggaagaacaaggatcctat  3224900                                                                                                 <---                                                                                                 ----                                     <---------DAG2                                           -------                        <---------ANAC58                                                  ===========                        --------->YAB1<----------DOF2                                     ------>ZmHOX2a(1)                        <---------ANAC58                                --------->At4g35610   <------ --------YAB1           <---------ANAC46                     <---------CCA1(2)            =========== ----->YAB1   <---------MYB52(1)---------->DOF2   <---------ALFIN1      <---------At4g35610  <-------   tatcacagctattcccgttattgctatcgtgaagaaaagccttttgttcgaaacaccgttcccatctcttcgtcttctcccgtttccatctccttctgct  3225000  Previous    Next  AGI:  At1g09910.1    Description:  lyase. similar to lyase [Arabidopsis thaliana] (TAIR:AT2G22620.1); similar to lyase [Arabidopsis thaliana] (TAIR:AT4G38030.1); similar to lyase [Arabidopsis thaliana] (TAIR:AT1G09880.1); similar to putative MYST1 [Oryza sativa (japonica cultivar-group)] (GB:BAD10227.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61576.1); similar to hypothetical protein OsJ_027094 [Oryza sativa (japonica cultivar-group)] (GB:EAZ43611.1); contains InterPro domain Carbohydrate-binding-like fold; (InterPro:IPR013784); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding; (InterPro:IPR011013); contains InterPro domain Galactose-b Range:  from: 3220037    to: 3224543    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g09920.1    Description:  TRAF-type zinc finger-related. similar to PRLI-interacting factor K [Arabidopsis thaliana] (TAIR:AT4G15420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61575.1); contains domain PTHR16295:SF10 (PTHR16295:SF10); contains domain PTHR16295 (PTHR16295) Range:  from: 3224686    to: 3227072    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version