Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------At4g35610                                   ---------->CDC5                   --------->At4g35610                                    <---------ANAC46         <-                   <---------At4g35610                                   <---------TOE2(2)         <-                   --------->ZAT2<------MYB83                            <---------TOE1(2)       <---                   <---------ZAT2--------->At4g35610                    ------>ZmHOX2a(1)   <--------                ---------->DOF2  <------MYB46(1) <---------At4g35610   --------->TOE2(2)  <---------ANAC46              <---------YAB1    <---------DEAR3(1)                 <---------ALFIN1    <---------ALFIN1   aaacttgagacggtttatgaaagctgagaagagggaggtgagtatcaattgagttgataacaaaattccccatcctacgtataatttccccagcgcgtat  3204900                                                                                                <----                                                                                                <----                                                                                               ------    <---------------AGL15                                                                 --------->LBD16    --------------->AGL15                                  ------>MYB83                  <---------LBD16   ----------------->AGL3                                  >>>>>>>>>>>>>>>>>LFY         <---------LBD16   <-----------------AGL3                                  ------>MYB46(1)              <------------ --------ANAC58                                           --------->ANAC58            <---------ARR14(2) --------ANAC58                                           --------->ANAC46            --------->ARR14(2) --------GT1      --------->ANAC58                 --------->ANAC46      --------->ATHB12<---------ANAC46 -ANAC46          --------->ANAC58   ---------->DOF2      --------->ANAC58 <---------WOX13(1)  <-----   aacttgctataaacagagacaagaacaccaagagaaacgtagagcgagagaactcgaaaccagccattgtttgtttgattggagactgtttccgggtttg  3205000                                                 <----------DOF2                                          --------->DAG2                                         ---------->DOF2 <---------AtMYB61                      ---------->DOF2 --MYB83                             ------>ZmHOX2a(2) --MYB46(1)                         <------ZmHOX2a(2) --->MYB59                         <---------ARR14(2)          <---------ANAC58 -----AGL1                         --------->ARR14(2)    <------ZmHOX2a(2) ---------->ID1<---------DREB2C(2) ----AtMYB61        >>>>>>>>>TBF1<---------YAB1<------NtERF2   <---------ANAC58<----------DOF2   gttttggtgaagaaagaatgaagaagaatggaattaagatcggaaaggcagcgttttggatcagagcttgtgtccatgtccctttgtattgtcggtcttg  3205100                                                                          --------->ANAC58                                                                          --------->ANAC58                                                                       <------ZmHOX2a(2)                                                                      <---------ARR11(3)           --                                                                      --------->ARR11(3)          <--                                                                    --------->ICU4                ---                                                                  ---------->DOF2                ----                                                               --------->LBD16                   ----                                                               ------>NtERF2                     <---               --------->ARR11(3)                             --------->ANAC46                   <---               <---------ARR11(3)            --------->YAB1   <---------ETT(1)                   ----          ------>ZmHOX2a(2)             ------->GAMYB        <---------LBD16     --------->LBD16<----      ----------->HVH21              ----------->RAV1(1)   <---------ARR14(2)--------->ARR14(2) -----   atcactctctgatcgattatcttggacgtagaagaagttcaacagaagcatgacaagagagtctccggcaaagatcaagaaaccgcagataaaaacagag  3205200                                                                    ------->TEIL          <-------GAMYB                                          <---------HSFB2a(2)         <---------ANAC58                                     <---------ARR14(2)         <---------ANAC46                                  --------->ALFIN1         <---------ANAC58                                 ------->MYC3 ------->MYB46(3)                                         <-------MYC3 ----ZmHOX2a(2)                    <---------ARR14(2)    <---------O2 ------>CCA1(2)             <---------ARR14(2)           --------->O2 ----->AGP1 --------->WRKY38(1)    --------->ARR14(2)    <---------ANAC46 ----->ARR11(3)          <---------TOE1(2)              ------>NtERF2 ------ARR11(3)    <---------At4g35610         <---------ICU4 --------->ARR14(2) ------ARR14(2)    --------->At4g35610        <---------YAB1<---------MYB46(3) ----->ARR14(2)<---------WOX13(1)  <---------GLK1(2)    <------NtERF2 -----GLK1(1)--------->ATHB12 ------>ZmHOX2a(2)--------->ATHB12  --------->HSFB2a(2)                < ---->GLK1(1)<---------MYB46(3)   <------ZmHOX2a(1)   <---------RAP2.6(2)                     <------   atccaccatttgcgttgattgagctccaaggatcgaggattctcgctcatcatttggccgcgtggttctggaccttgaaactcttccatgagtctctgct  3205300                                                                                  <---------WOX13(1)                                                                                 <------------CBF                                                                                --------->ATHB12                                       --------->DAG2                          --------->ICU4           *TSS                       ---------->DOF2                          <---------YAB1         <<<<<<<<<TBF1               <---------AHL20(2)                 --------->KAN4(2) <---------ANAC46      <<<<<<<<<TBF1         --------->ARR14(2)                      --------->At4g35610   <---------ANAC58   <<<<<<<<<TBF1         <XXXXXXXXXXXXXXXXXXXXMIR2112-3P <---------STY1(1)   --------->YAB1 <<<<<<<<TBF1      <------------CBF<-----------TBP  <-----------GT1 <---------At4g35610   <---------ANAC58 ---At4g35610 <----------DOF2     ------->TEIL--------->TOE2(3) --------->ALFIN1<---------ICU4   tcttcttcttcttcttctttggattgtccaaatatgtatataaagtaatcttataaaccctagaggctggagctcattctcatgattgtttaacgtgcaa  3205400                                                                                   <------MYB83                                                                                   <------MYB46(1)                     ---------->DOF2                                              --------->MYB59                   --------->ARR11(3)        --------->ANAC46                 --------->ATHB12               ---------->DOF2               --------->ANAC55(2)            <---------WOX13(1)            --------->HSFB2a(2)              --------->ANAC58              <-----------------AGL1            <---------HSFB2a(2)              --------->ANAC58              <---------ANAC46           <---------LBD16                   <---------ANAC55(2)           <---------ANAC58      --------->AHL20(2)                 <-----------HVH21 <----------DOF2 <---------ANAC58      <---------AHL20(2)     --------->CCA1(2)       --------->WRKY18(1)  <---------MYB46(3)   acacacattttaatctggaaagataaagaagagacgaagtcttggtcacgaaatggtcatgcttttgactcaacgttgcttgattaggtctcatcacatt  3205500                                                               ---------->DOF2                                  <---------AHL20(2)         <------NtERF2                                 --------->AHL20(2)         ------>NtERF2                                <---------YAB1              --------->RAP2.6(2)                           <------MYB83                    --------->ATERF1(2)                           ----------->GT1                 <---------DEAR3(1)                       --------->ATHB12                    <---------RAP2.6(2)           ----------->GT1         <-------TEIL <---------TOE2(3)                    <---------ATERF1(2)      ----------->HVH21     --------------->AtSPL8<------MYB46(1)                --------->RAP2.6(3)      <---------MYB52(2)     <---------ICU4   <---------YAB1                      <---------LBD16         <---------At4g35610     <---------------AtSPL8<---------MYB46(3)        <---------ARR14(2)           --------->At4g35610    <---------ATHB12  <---------TOE1(3)              --------->ARR14(2)<----------ID1--------->MYB52(1)    --------->ICU4 <---------MYB52(1)       ---------->DOF2<---------ANAC46---------->DOF2   --------   tttctaatgagtacattatctgttaagattggttattatatgatatcaaagagcatatttggcggcaaaggagaagacaaagacagctaacaggtttaaa  3205600                                                                                                  <--                                                                                        ----------->HVH21                                                                                      --------->ALFIN1                                                                                    <---------ANAC58                                                                 ---------->DOF2    <---------ANAC58                                                                 =============================bZIP_DOF                                                                 =============================bZIP_DOF                                                             <------ZmHOX2a(2)      <---------ANAC55(2)                                                             --------->CCA1(2)      <---------ANAC55(1)                                                            ------------------------>ANAC81     <----          ---------->DOF2                                   <---------ARR11(3)      <---------TGA1a        --------->At5g28300 <---------ARR14(2)              --------->ARR11(3)      <---------ANAC46       ------->GAMYB        --------->ARR14(2)              --------->ARR14(2)      =================       --------->TOE2(3)  --------->LBD16                   --------->AGP1          --------->O2<----       --------->TOE1(3) --------->ANAC46          --------->GLK1(2)                <---------O2<----       ----------->GT1   ------->GAMYB             <---------ARR11(3)               --------->TGA1a<-     -------->P  ------>MYB83                      --------->ARR11(3)              <-----------------     ------>MYB83------>MYB46(1)         <---------ICU4     <---------ARR14(2) ======================     ------>MYB46(1)    <---------LBD16 --------->AHL20(2) --------->GLK1(1)   ====================== ->AHL20(2)   --------->DEAR3(2)        <---------AHL20(2) <---------GLK1(1)   ---------->DOF2 ------   tcggtccaaccgtaaaaccgacttcaaccggaactgaaccaaaaaattacaaaaatcttggagatccaaaagacttaaaccaaaagacgtgtgaagggtc  3205700          ---------->DOF2        ----------->HVH21      <---------ANAC55(1)      <---------ANAC46      <---------ANAC58      <---------ANAC58     <------NtERF2     <-----------------------TaNAC69(2)   --------->ALFIN1  <-------MYC4  ------->MYC4  ------->MYC2  <-------MYC2  ------->MYC3  <-------MYC3  -------->ABF1  ------->PIF5  <-------PIF5 <---------TGA1a --------->TGA1a ====================bZIP_DOF --------->O2 <---------O2 --------->ANAC55(2) <---------ANAC55(2) --------->ANAC46 -------REM1(2)                                                 <---------AHL20(2) -----WRKY45                                                   <---------WOX13(1) ====================bZIP_DOF                                --------->ATHB12             ------>ZmHOX2a(1) -----WRKY38(1)                                           <---------ANAC58              ----------->RAV1(2) -----WRKY12                                              <---------ANAC58             ------>ZmHOX2a(1) --------ALFIN1                                      --------->ALFIN1            <---------HSFB2a(1) ------TaNAC69(2)                                  <---------ANAC46              --------->HSFB2a(1) ==========bZIP_DOF                                <---------ANAC58              --------->HSFC1(2) ==========bZIP_DOF                        *TSS    <---------ANAC58              <---------HSFC1(2) --->WRKY18(1)                          --------->ALFIN1  <---------ANAC46    ---------->DOF2   aacacgtggcgtgaaaggagcaaactcgtgtgaatcgaagcagtggaacagtggcttgtggcttgattaatcggaaacttgaaagcttcctcctgaagga  3205800  Previous    Next  AGI:  At1g09860.1    Description:  ATPUP16 (Arabidopsis thaliana purine permease 16); purine transmembrane transporter. Identical to Probable purine permease 16 (PUP16) [Arabidopsis Thaliana] (GB:O04508); similar to purine permease-related [Arabidopsis thaliana] (TAIR:AT1G57980.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73056.1); contains InterPro domain Protein of unknown function DUF250 (InterPro:IPR004853) Range:  from: 3204018    to: 3205311    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g09870.1    Description:  histidine acid phosphatase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO41425.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41427.1); contains InterPro domain Histidine acid phosphatase; (InterPro:IPR000560); contains InterPro domain Histidine acid phosphatase, eukaryotic (InterPro:IPR016274) Range:  from: 3205743    to: 3208600    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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