Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <------ZmHOX2a(1)     --------->ARR11(3)     --------->ANAC46   --------->ICU4           --------->ANAC58 ---->YAB1                  --------->ANAC58                                     --------->ZAT6     < ->YAB1                   <---------AtLEC2         <-----------GT1  --------->YAB1               <--- -YAB1                <----------DOF2      <----------DOF2          --------->TOE2(3)     -----------   agaaaatgattttgacaaaatcaactttgcaggaaacaaaacaaacttttgagtaacttcttcgtctcaagcttaatattcggacactaatttagttatt  3170400                                                                                          <---------PCF2                                                                                          <---------ARR14(2)                                                                                          --------->ARR14(2)                                                                      <---------GLK1(2) --------->LBD16                                       <---------GLK1(2)        --------->ANAC58       <---------ANAC58                      <---------AHL20(2)--------->GLK1(2)       --------->ANAC58       <---------ANAC58 ----------DOF2 --------->ANAC55(2)    --------->ARR14(2)     --------->ARR14(2)      <---------LBD16 ------AHL20(2) <---------ANAC55(2)    <---------ARR14(2)     <---------ARR14(2)  <-------TEIL   ---- >GT1     <---------YAB1             ----------->ARR10   ---------->DOF2  ----------->RAV1(2) ------>ZmHOX2a(1)   ttcttttgttatatcattaagtatttttttttataaacccagattctcccaagaacaaaaaaaggaaccccagattatctgaggctcatgcgggtcctat  3170500                                                                                      --------->O2                                                                                      <---------ZAT2                                                                                      <---------At4g35610                                                                             --------->ALFIN1                                                                             <---------ANAC46                                                                             ===================RAV                                                                             <-----------RAV1(1)                                                                          --------->ALFIN1                                                                        <---------ANAC55(2)                                                                        --------->ANAC55(2)     -----                                                                        <---------ANAC55(1)   <------                                          --------->AHL20(2)            <---------ANAC58    ---------                                      <------ZmHOX2a(1)                 <---------ANAC58   ----------                            <---------ARR14(2)                          <---------O2<-----------RAV1(2)                  --------->TOE2(2)  ----------->GT1                    <---------bZIP60(2)<---------YAB1 ----->YAB1       --------->TOE1(2) ------------------------>ANAC81     <---------ANAC46   --------->ICU4   aatcagacacagaaataaaacttacgagaaaatatggagaggaataaaaaaaaacaagagaaggaagaagagttacgtggtgttggccaggtgatgataa  3170600                  --------->ATHB12                  <---------ICU4                    ----------->RAV1(2)     ------>ZmHOX2a(2)                              --------->At4g35610       --------->YAB1    <------ZmHOX2a(2)                          --------->ARR14(2)          --------->YAB1   --------->ARR11(3)                          <---------ARR14(2)         --------->ICU4   <---------ARR11(3)                     <---------ARR11(3)              <---------YAB1   --------->ARR14(2)                     <---------ARR14(2)            <---------ICU4   <---------ARR14(2)       --------->MYB52(1)<---------CCA1(2)         --------->YAB1  --------->HSFB2a(1)      <---------SPL7 <-----------ARR10          --------->WOX13(1)  <---------HSFB2a(1)  <-----------GT1    --------->ARR14(2)       <---------YAB1 ----->DOF2      --------->ICU4          <------ZmHOX2a(1) <---------ATHB12<---------ICU4 ---YAB1         <---------YAB1   ==============HOX2a_HOX2a--------->MYB46(3)<---------YAB1 >YAB1         <---------ICU4     <------ZmHOX2a(2) <---------At4g35610<---------ATHB12 ->GT1         --------->YAB1--------->SPL7 ------>ZmHOX2a(2)   <---------AHL20(2)   aagaagatcccatttgataatgatttttccgaacggatcaagaggatcgtatccatctgcaaccattttatcaatcataatcataaaccctacaaaacaa  3170700                                                       <---------MYB46(3)                                                      --------->ALFIN1                                                    --------->ALFIN1                                                  <---------O2                                                  --------->TGA1a                                                  <---------ANAC55(1)                                                  --------->ANAC55(2)                                                  <---------TGA1a                                                  --------->O2                <---------YAB1                    <---------ANAC58           <---------MYB52(1)                     <---------ANAC55(2)        <-------TEIL                              <---------ANAC46                                  -       --------->ARR14(1)                         <---------ANAC58                                  <      <---------GLK1(2)--------->YAB1    ---------->DOF2                                        -----      --------->ARR11(1)                 ===================bZIP_DOF                        ---------      <---------ARR14(2)       =============================bZIP_DOF                        ---------      --------->ARR14(2)     XXXXXXXXXXXXXXXXXXXX>MIR1887      <---------YAB1          <----------ID1 <XXXXXXXXXXXXXXXXXXXMIR866-3P ---------->DOF2   <<<<<<<<<NAP  <---------TOE2(3)     --------->MYB52(1)   ttttcaaagattcgttttgtgataagaataacaaaaagagtctaaaagacttacgtgtgggtgataagattgaacagagaatgacagtaacgacgagcaa  3170800                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                         --------->TGA1a      -------                                                                         <---------O2  --------->GLK1(2)             --------->ANAC58                                        <-----------HVH21<---------GLK1(2) -------->ARR11(3)                                      <------ZmHOX2a(2)<---------TGA1a   --------->At4g35610 ---------ARR11(3)                                     --------->ARR11(3)<---------ANAC46  <---------At4g35610 ----->DOF2  --------->ANAC58                          <---------ARR11(3)--------->O2 --------->ARR14(2) >ANAC58  --------->ZAT14                   <---------AHL20(2)  <-----------GT1       <---------ARR14(2) >ANAC58  <---------ZAT18                   --------->AHL20(2) --------->AHL20(2)    <---------At4g35610   aagatttagcattgcacccatttttgtctcacagacgatgaacaaattaaacgagaagatcaaaataaactagtcacgtcgaatttcagattccgatgaa  3170900              <---------ANAC55(2)              ----------->GT1         <---------HSFB2a(2)   <---------AHL20(2) ---------ARR11(3)                                                                         <---------GLK1(1) -------->AHL20(1)                                                                         --------->GLK1(1) ---------AHL20(1)                                                                 ------>NtERF2 -------->ARR11(3)                                                                --------->bZIP60(1) ------>ARR11(3)                <----------DOF2             --------->ARR11(3)    <---------bZIP60(1) -------ARR11(3)               <---------ANAC58      ----------->GT1              --------->ANAC58 ------>AHL20(1)        --------->ATHB12    ---------->DOF2 <---------ARR11(3)    --------->ANAC58 -------AHL20(1)       <---------YAB1    --------->YAB1    --------->RVE1(1)   ----------->HVH21 -->YAB1 --------->HSFB2a(2)   <---------ANAC58     ----------->GT1           <-----------HVH21   aatatttttttctaaaacgtgaattttgatttggctttgggaataagaaagagagagataaaaatctcaagagttttaagtgtgacgcctcgggtttctc  3171000                                                                                            ---------                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                                                                          --------->ANAC46                                                                                         <---------ZAT14                                                       <---------ZAT14                   --------->ZAT18                                 ---------->DOF2       --------->ZAT14                 --------->ZAT14                            ---------->DOF2<---------ALFIN1<---------ZAT6              <---------ZAT18                           --------->AHL20(2)  --------->At5g28300                   --------------->AtSPL8                      ------------>CBF <-----------HVH21 <---------ANAC46            <---------------AtSPL8   tgtgttaagagagagagatagagagacaattaaagcaaagaagtcacacagtgactgtttagtgtttgcaacgaagagttttgcatttgtgtacacaaca  3171100                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                  ---                          <<<<<<<<<<<<<AGL25                                                 <-------                          <---------------AGL15                                             <--------                          --------------->AGL15                                           <---------ICU4                         ----------------->AGL3              --------->YAB1          <---------AHL20(2)                <----------DOF2                             <---------YAB1           --------->AHL20(2)          <---------ZAT14<-----------------AGL3          <---------AHL20(2)   --------->At5g28300 ---    <---------ALFIN1     <-----------------AGL2          <---------YAB1    --------->At4g35610  <---- --------->MYB46(3)   <----------DOF2           <----------DOF2<---------YAB1----------->GT1--------- >ANAC46  --------->ZAT14============================================================================   acaacaacactcttcactctttttctttctatttttggatttttgacttacttttattttttattatcaaggctattagctgtaaaataaaatcattttt  3171200                                                                                     --------->DOF5.7(2)                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                                  <---------TOE2(2)                                                                                  <---------TOE1(2)                                                                                  <-------TEIL        <---------ZAT14                                                           --------->SPL7        --------->ZAT14                                                           ------->TEIL    --------------->AtSPL8                                                      <---------SPL7    <---------------AtSPL8                                   <---------YAB1    <---------ANAC55(2) --------MYB59                                              <---------AHL20(2) --------->ANAC58 ------->TOE2(3)                                          <---------YAB1       --------->ANAC55(2) --------DAG2                                      --------->ATERF1(1)         --------->ANAC46 ------->TOE1(3)                                   <------NtERF2               --------->ANAC58 -------------->AG                             <------MYB46(1)                --------------->AtSPL3 --ICU4 <---------ZAT18                       --------->MYB111(1)             <---------------AtSPL3 -YAB1  --------->ZAT18                       --------->MYB46(2)        --------->ICU4              < -------------->AGL1                 <--------P<------MYB83 <---------AHL20(1)--------------->AtSPL8< -------GT1                         <---------MYB52(1)<---------At4g35610--------->ATHB12        <--- >ICU4 <-----------GT1            --------->HSFB2a(2) <---------ZAT2 <------ZmHOX2a(1) <---------ARR11(3) ===============MADS_MADS         <---------HSFB2a(2)------>NtERF2 <---------TOE2(3) <---------MYB52(1)   accttatttgtacactcttctaattcttcaagttttctggtagtttagtaggtgccagctattatttttgaggaatgattcacgtacgttatcttcttgt  3171300  Previous    Next  AGI:  At1g09790.1    Description:  COBL6 (COBRA-LIKE PROTEIN 6 PRECURSOR). Identical to COBRA-like protein 6 precursor (COBL6) [Arabidopsis Thaliana] (GB:O04500); similar to COBL1 (COBRA-LIKE PROTEIN 1 PRECURSOR) [Arabidopsis thaliana] (TAIR:AT3G02210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46997.1); contains InterPro domain COBRA-like (InterPro:IPR017391); contains InterPro domain Phytochelatin synthetase-like conserved region (InterPro:IPR006918) Range:  from: 3168484    to: 3170821    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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