Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->ATHB12  --------->ANAC46                         <---------YAB1 <---------ZAT18                      <-------MYC3 --------->ZAT14                   <---------ALFIN1                       <---------HSFB2a(2)       - <---------ZAT14                  <---------REM1(2)              <-----------GT1               ------ ----->ARR14(2)          <<<<<<<<<TBF1------->MYC3          --------->ICU4--------->HSFB2a(2)  ------ ------ARR14(2) ------>MYB83  --------->TOE2(3)           ----------->RAV1(1)--------->YAB1   <------ >At4g35610     ------>MYB46(1)------>ZmHOX2a(1)--------->ZAT14<---------MYB52(2)       --------->YAB1   ctctgcacaacttggaccttccatttcttcttcctcaacacgtttttcattgcagactggcaacaattaaccatttccataagaactcactcatatatga  3153800    <---------AHL20(2)    --------->AHL20(2)    --------->ATHB12    --------->ATHB51               <---------YAB1                                   --------->ATHB51   <---------AHL20(2)            <---------ICU4                                     <---------ICU4 <---------ICU4                  --------->YAB1                                    <---------YAB1 -------->ICU4          ----------->GT1                                          <--------HAHB4 --->YAB1              <---------------AtSPL8------>NtERF2      --------->YAB1   --------->YAB1 ----->GT1<---------ANAC58      <---------ATHB12    <---------AHL20(2)          <---------YAB1     <- ---YAB1  <---------ANAC58      --------->ICU4     --------->AHL20(2) ------->GAMYB--------->ICU4  --   taaaaattatttgcttctgaacaatatagtacaaatcattatagtgcctcccataaaattgtagtatcacaacagcattagtatcattatttctcacata  3153900                                                                             --------->TOE1(3)                                                                            --------->At4g35610                                                                      <---------TOE2(3)                 <-------TEIL                                         <---------TOE1(2)         --------->ANAC58                            --------->AHL20(2)     <---------At4g35610         --------->ANAC58                          --------->YAB1     <---------TOE2(2)       ---------->DOF2                  <---------HSFB2a(2)           <---------TOE1(3)             - --------ZAT14 --------->YAB1           --------->HSFB2a(2)     --------->GLK1(1)                   - ------->ZAT14--------->ICU4         --------->GLK1(2)          <---------GLK1(1)           <--------   ctgcagaaacaaagcaatgttcattcaactatatacaagagtctggaaaactaaaataaacagaagaattccaaggttagcttaacttctctccgtttac  3154000                               ------->GAMYB                             --------->At4g35610         ------->GAMYB   --------->ANAC46       -------->P        --------->HSFB2a(2) <---------ARR11(3)   <-----------GT1 --------->ARR11(3)<---------YAB1                      --------->YAB1 -------->RVE1(1)<---------AHL20(2)               --------->AHL20(2)                  --------->YAB1 -------->CCA1(1)--------->AHL20(2)               <---------AHL20(2)            --------->YAB1 -MYB52(1)      <---------AHL20(2)             --------->GLK1(2)              ------->TEIL         <-   aaatatctcaaccccaaaattatttttccacaactgaaactgaagcgagaatttaaatcagcatttgaagtttagagatgaatcagagtaataacttaca  3154100                     <---------ARR14(2)                     --------->ARR14(2)                  --------->HSFB2a(2)             <---------ANAC46             <---------ANAC58                                               --------->At4g35610             <---------ANAC58                                               <---------At4g35610            <------NtERF2                                                <---------ZAT2          <---------DEAR3(1)        --------->ANAC58                     --------->ZAT2  --------->ZAT2       <---------ANAC58             --------->ANAC58                     --------->At4g35610     ----       <---------ANAC46  --------->LBD16        ----------->GT1          <---------At4g35610  -------       <---------ANAC58<---------LBD16     <---------TOE2(3)       <----------DOF2       <---------ZAT2      <-------TEIL<---------HSFB2a(2) <------ZmHOX2a(1)         <---------ARR11(3)     <---------ZAT18 ---------DOF2<-------GAMYB       <---------AtLEC2             <---------ATHB12    ---------->CDC5   gctttggatgcgttggcgttgcagaaccggagaattgcaaggactagggtttgtgaatttttccaataactttccagctgcagactcagcgagctcgtcc  3154200                                                                                            ------>ZmHOX2a(2)                                                                                            <--------                                                                 --------->LBD16           <------ZmHOX2a(2)                                                            <---------ABI4(2)             --------->ARR14(2)                                                            --------->MYB46(3)            <---------ARR14(2)                                                          --------->PCF2                 --------->GLK1(1)                                                        --------->ANAC58                 <---------GLK1(1)                                                        --------->ANAC58              --------->LBD16                                                       --------->DAG2        --------->GLK1(2)                                                      ---------->DOF2        --------->ARR14(2)                                                    <------ZmHOX2a(1)   ----------->GT1 ----------->ARR10                                                  <---------TOE2(3)  --------->MYB52(1)<------NtERF2                                             --------->GLK1(2)--------->MYB52(1)    <---------LBD16  <----------DOF2                            <---------ARR14(2)<---------LBD16    --------->ANAC46 -->ZmHOX2a(1)             <-----------GT1  --------->GLK1(1) ------>NtERF2  <-----------ARR10     -- --->ID1            ---------->DOF2         <---------GLK1(1)<---------ALFIN1<---------ARR14(2)   <--   tcttctttgaaatcgaatacttcaaagtttttcttcatcgctagggaaatctgaggaaaagccccaccggaaaacggagaatccaagccggagatcggcg  3154300                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                 ----                                                                                                -----                                                                                              <------                                                                                              -------                                                                                           --------->ANAC58   --------->GLK1(1)                                           --------->MYB46(3)          <---------TGA1a -DEAR3(1)                                        --------->ANAC46                         --------->TGA1a ------->YAB1                 <------ZmHOX2a(1)   --------->ANAC58         <------NtERF2   --------->ANAC58 ----ZmHOX2a(2)    --------->ALFIN1               --------->ANAC58        ------>NtERF2<---------MYB52(2)   atcagaaatcgagggggtcgagtgagggagaaggagagagagaaacgtctaaacgaaataagtcaacaacgaatgccagcgcgtctgaaactcacgcgcg  3154400                                         --------->AHL20(1)                                         <---------AHL20(1)                                         <---------ARR11(3)                                         <---------ICU4                                     <---------AHL20(2)                                    --------->AHL20(2)                                    --------->AHL20(1)                                    <---------AHL20(2)                                    <---------AHL20(1)                                 --------->AHL20(2)                          ----------->GT1--------->ARR11(3)       <-----------GT1    <---------ANAC55(2)      --------->ZAT14     --------->ANAC58                                                    -------  <---------TOE2(2)       --------->ANAC58                                                    ------>NtERF2 ------->ANAC58      <---------------AtSPL8                                                  -------- ------->ANAC58      <---------------AtSPL3 <-----------GT1                                <---------At4g35610 ------>SPL7       --------->YAB1<---------AHL20(2)                                        --------->At4g35610 -->NtERF2        <---------YAB1 --------->AHL20(1)                                <----------DOF2 ---->DEAR3(1)  --------->YAB1  <---------AHL20(2) --------->ANAC55(2)             ================== ---LBD16 --------------->AGL15 --------->AHL20(2) <---------ANAC55(2)            <---------DAG2    - -->LBD16--------->ZAT6   --------->ANAC55(2)<---------YAB1          ----------->HVH21    --------->ANAC46   gacgtaagtttactctatttataatagtacgtaaataatttaatattttcattacataattcggctatggaatgacaggtatacccttttgtaagccgcg  3154500                ----------->HVH21              <---------ANAC46              --------->TGA1a              --------->O2              ===============bZIP_DOF              <---------ANAC58              <---------ANAC55(2)              <---------ANAC58              <---------O2              ===============bZIP_DOF <---------AHL20(2) --------->ANAC58 --------->AHL20(2) --------->ANAC58 -->LBD16     <---------TGA1a  ------>ZmHOX2a(1) ->RAP2.6(2) <-----------------------TaNAC69(2)                       --------->TOE2(3) =======================bZIP_DOF                                      --------->TOE1(3) -------->AHL20(2)---------->DOF2 *TSS <----------DOF2           ---------->DOF2   aatttaaaaatgggagacgtgaaagccatcgtcctcttgaactttccaagagttgaagaaaatcacagaaagccttagcacagagaagagagattgaaga  3154600                                          <---------MYB46(3)                                         ===========================================MYC_MYB                                        <------NtERF2                                        --------->At5g28300                        <---------HSFB2a(2)                                        <-------GAMYB                          --------->ZAT18                                        ============================================MYC_MYB                                       <---------MYB46(3)                      <---------PCF2                                      <---------ANAC46                       <---------ZAT18                                      <---------RAP2.6(2)                    <---------DEAR3(1)                                   --------->ALFIN1                         --------->ALFIN1                            <-------GAMYB<--------P                       <---------ZAT2                           <---------ANAC46                               <---------TGA1a        <---              <------ZmHOX2a(1)  <-----------RAV1(1)                      --------->ZAT2       ------           <---------LBD16 <---------ANAC58           <---------ZAT2      <---------O2     --------->TOE1(3)           <-----------RAV1(2)<---------MYB46(3)      <---------O2        <---------ANAC46 --------->TOE2(3)     ------->TEIL          <---------ANAC58           --------->O2        <---------bZIP60(2)  ------   agtcatggatgtttcaggaagcttgaattgcgttgttgtggcggtagatggaagcgaggtgagtatggaagctctgaggtgggctctagacaacctcaag  3154700  Previous    Next  AGI:  At1g09730.1    Description:  Ulp1 protease family protein. similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT4G33620.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78777.1); similar to Os05g0207900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054903.1); contains InterPro domain Peptidase C48, SUMO/Sentrin/Ubl1; (InterPro:IPR003653) Range:  from: 3147669    to: 3154238    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g09740.1    Description:  ethylene-responsive protein, putative. similar to universal stress protein (USP) family protein [Arabidopsis thaliana] (TAIR:AT3G11930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61617.1); contains InterPro domain UspA; (InterPro:IPR006016); contains InterPro domain Universal stress protein (Usp) (InterPro:IPR006015); contains InterPro domain Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729) Range:  from: 3154534    to: 3156277    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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