Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <---------ICU4                                                                            <---------YAB1                                                                       --------->YAB1 <---------ICU4                                                         <---------ANAC58 --------->YAB1 --------->YAB1                                                         <---------ANAC58 <---------ICU4 <---------ICU4     <---------ANAC58                               <---------MYB46(3) <---------ICU4 --------->YAB1     <---------ANAC58                           <---------AtMYB61     <---------YAB1 <---------YAB1 ----------RAV1(2)                           <---------ANAC58       --------->YAB1   --------->ICU4 ---ARR14(2)      --------->MYB52(2)         <---------ANAC58      <---------YAB1<-----------TGA1 -->ARR14(2)    <---------MYB52(1) --------->At4g35610   <---------ANAC46<---------YAB1 <---------YAB1   ctcagggacttgtggtatgttagttccactgggaatgagatgaagatgcttaggtggtttcttgggattatcatcatcatcatcgtcatcatcatcaaca  3146900                                                                         --------->YAB1                                                                        <---------YAB1                                                                       --------->ARR11(3)                                                                       <---------ARR11(3)    --------                                                                      --------->YAB1         --------                                                              <---------ZAT18                --------                                          <---------WOX13(1)  <---------ETT(2)      --------->At4g35610                <---------LBD16         --------->ATHB12   <---------ANAC46         <---------At4g35610  <---------ARR14(2)               --------->YAB1<----------DOF2     <---------ATHB12  ---------->DOF2  --------->ARR14(2) ---------->DOF2   <---------YAB1   --------->ARR14(2)    <---------ANAC58 <------ZmHOX2a(1)--------->LBD16 <------ZmHOX2a(2)     <---------ARR14(2)    <---------ANAC58   agaggaaatggaacatgttcagggaaagcggtagcgatcatatgattggcactttgaagttctgtggacaaatgatcatagcgttctgctaaagcacggt  3147000                                             ----------->GT1                                            <---------TOE2(3)                                           <---------LBD16                                       ----------------------->TaNAC69(2)                                       <----------DOF2                                      --------------->AGL15                                      <---------------AGL15                                     ----------------->AGL1                                      ----                             --------->GLK1(2)--------->At5g28300                                ====  --------->ANAC58       <-----------GT1   <---------At5g28300                                 ------  --------->ANAC58--------->ANAC58   <-----------------AGL1                                    <----- ->ANAC58         --------->ANAC58   <-----------------AG      <----------DOF2                ------- ->ANAC58         --------->ANAC46   ================================================================ ->ANAC46        --------->LBD16     ----------------->AGL2<---------At4g35610               <-------   atgaacgaaatgcttcttccacgaaattgacaatctctggccttttacggtaatacatctccgctcttttagcaaaactgtctccatctccatcaatgat  3147100            <-----------GT1          <---------DAG2      --------->ZAT14             ---------->DOF2      <---------ZAT14            <------ZmHOX2a(1)      <---------ZAT18      --------->ARR11(3)                                     <---------ANAC46      --------->ZAT18      --------->ARR14(2)                                     --------->ANAC55(2)    <---------------AtSPL3 <---------ARR14(2)                                     <---------ANAC55(2)    --------------->AtSPL8 <---------ARR11(3)                                     <---------ANAC58    <---------------AtSPL8 <---------ARR11(1)                                     ----------->GT1 -->ZmHOX2a(2)          --------------->AGL15                                     <---------ANAC55(1) ============================HOX2a_HOX2a                                          <---------O2 --->ARR11(3)           <---------------AGL15                                     <---------ANAC58 ----ARR11(3)          ----------------->AGL2                                    <------------------- -->YAB1------->TEIL  ------>ZmHOX2a(1)----------->GT1                   ------->TEIL =======================================MADS_MADS                        <---------YAB1 --ATHB12 <----------DOF2 <---------CCA1(2)                        --------->GLK1(2)          -------   cttaagtgtgtactttaccttctcctccatatctaggaaagttgaaaaattcagaacattgcattgaagaatatgaacattgttacgtgaaaacatgaaa  3147200                                                                           --------->ANAC55(2)                                                                           --------->ANAC46                                                                --------->AtMYB61                                                         <-----------TCP11(1)           --------->At4g35610                                                       <---------ANAC58    --------->ANAC58        --------->TOE1(2)                              <---------ANAC58    --------->ANAC58        <---------ANAC46                          <-----------RAV1(1)      <---------ANAC55(2)      ------->TEIL                               <---------ARR14(2)  <---------YAB1     <---------At4g35610      --------->SPL7                          <---------ANAC58  <---------ALFIN1        --------->ZAT2    <---------SPL7                            <---------ANAC46 <---------MYB55(2)       --------->ZAT14   --------->TOE1(1)                          <---------ANAC58 --------->MYB46(3) <---------ANAC58   --------->TOE2(1)                      <---------ANAC58   <---------ALFIN1     <---------ANAC58 ----TaNAC69(2)                           <---------ANAC58--------->PCF2--------->ARR14(2)         -- --->DOF2                --------->ANAC46 <---------ANAC46<---------PCF5<---------ARR14(2)       ----   gaacatcgtaccttggagattgtgttcgagccatttggattgttttgtgcgtatgtggctggcccaccaccatgaatacgcattgctcgctgctctctgc  3147300                                                                                          --------->GLK1(2)                                                                                         --------->ARR14(2)                          ------->TEIL                                                   --------->ARR11(3)                     --------->CCA1(2) <----------DOF2                 <---------ARR11(3)<---------ARR14(2)              <----------DOF2 ------>ZmHOX2a(1)                        --------->ARR11(3)<---------GLK1(2) ------->REM1(1)   --------->YAB1<----------DOF2          --------->ZAT14     <----------DOF2 ------->RAV1(1)  <---------YAB1 <---------DAG2 <-----------GT1  ----------->GT1 <-----------TBP    <   aacatcagagtttcttctttatgatatgcatcctcctttttcttttgttatttccttctctgttctcatgttaaatctttcttttttataagattctcaa  3147400                                      --------------->AGL15                                      <---------------AGL15                                     ----------------->AGL3                                     ----------------->AGL2                               --------->ARR11(3)                                    --------->ANAC58                                      <---------ARR11(3)              <---------ANAC58      --------->ANAC58                          <---------AHL20(2)              <---------ANAC58      --------->ANAC46                         <---------AHL20(2)              <---------ANAC46  <<<<<<<ZML2               <------------CBF   --------->AHL20(2) ----------DOF2           <-----------GT1           ----------->GT1<----------DOF2  ----------->GT1 -   gacttttaagtttcttccttgtgggatttaactagaacacccaaatttagaagatggtaatattgttttcttttgttaatttaaaatggtaagatgtttc  3147500                                                                                                    -                                                                            -------->ATHB1 --------->ANAC55(1)                                                                            --------->ATHB51      ---                                                                            --------->ATHB12<--------                                                                           <---------YAB1  --------->ANAC46                                                                  <-----------GT1          --------->ANAC58                                                               <---------ICU4              --------->ANAC55(2)                                                               --------->YAB1           <---------ARR14(2)                                                               <--------HAHB4<------------CBF--------                                                              --------->ICU4<---------ICU4 --------->ANAC58                                                              <---------ATHB51<---------YAB1---------                                                             <---------MYB52(1)   <-----------GT1 <--           ----------->TBP         <---------ANAC46       <---------ANAC46<----------DOF2  <---------ANAC55(2) -------->At5g28300          <-----------GT1       --------->AHL20(2)<------------CBF   --------->ARR14(2)   actgtaaatgactatataagacttggcagtttaactggtttgtaacagaagaaaaaaatggccgataattacattgcattattgttacagaatacgtcag  3147600                                           ------->TEIL                                    --------->ANAC58                                    --------->ANAC55(1)           ----------->RAV1(1) -------->MYB46(3)                  --------->ANAC55(2)      <---------MYB46(3) ------>ARR14(2)          --------->AHL20(2)               <---------ZAT2 ---TGA1       --------->ANAC58     <---------ANAC55(2)    <---------At4g35610 ->TGA2(2)     --------->ANAC58     --------->ANAC58       --------->At4g35610 >TOE2(3)   ------>ZmHOX2a(1)    <-------TEIL            <-----------RAV1(2)    ----------->GT1 -------ARR14(2)   ---------->DOF2  --------->ANAC46     =====================RAV       <-----------GT1   tatccaccgatgtcctcaagaaaaagaataaaacatacacgtatgaaactaatttggattcagctgttcaacagataacaacaggtttattcacattcga  3147700                                        --------->CCA1(2)                                        <---------GLK1(1)                                       <---------ARR11(3)                                       --------->ARR14(2)                                       <---------ARR14(2)                                       --------->ARR14(3)                                       <---------ARR14(3)                         --------->TOE1(3)                                       --------->ARR11(3)                         --------->TOE2(3)                                     ----------->ARR10                         --------->ARR14(2)                                 ------>NtERF2                    <---------ICU4------->TEIL                                ------>NtERF2                    --------->AHL20(2)                               <-------PIF5                ----------->GT1     <---------ARR14(2)                               ------->PIF5           <---------AHL20(1)     ----------->ARR10                               <------NtERF2          --------->AHL20(1) --------->ANAC46      ------                               --------->LBD16     --------->AHL20(2)   <---------LBD16       <------ <---------YAB1              <---------LBD16    --------->YAB1   <---------AHL20(2)     --------->AHL20(2)   gttttgatagttttcaaacaggggaaaacagcccgggccaagatattcgaccataatatatatgtaaaaaattactcggaagaacctcaaataaaaacca  3147800  Previous    Next  AGI:  At1g09720.1    Description:  kinase interacting family protein. similar to EMB1674 (EMBRYO DEFECTIVE 1674) [Arabidopsis thaliana] (TAIR:AT1G58210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61601.1); contains InterPro domain KIP1-like (InterPro:IPR011684) Range:  from: 3144440    to: 3147305    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g09730.1    Description:  Ulp1 protease family protein. similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT4G33620.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78777.1); similar to Os05g0207900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054903.1); contains InterPro domain Peptidase C48, SUMO/Sentrin/Ubl1; (InterPro:IPR003653) Range:  from: 3147669    to: 3154238    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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