Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------------->AGL15 --------->ANAC58                    <-                                       <-----------GT1         --------->ANAC58                    <-             <----------DOF2          <-----------GT1         --------->DAG2              -----------       ---------->DOF2   --------->AHL20(1)        <---------ICU4                --------->YAB1    <-   <---------ZAT6        --------->ARR11(3)  --------->YAB1  ---------->DOF2  --------->YAB1 <-------   atttagtggtaaagtctttttggcacatatattgaacatttttccaattttaaaaattgctgaaaaagcaaactcttgaagaataataagtctagttaat  3122600                                                                                  --------->YAB1                                                                         --------->ANAC46                                                                         --------->ANAC58                          <---------HSFB2a(2)                            --------->ANAC58          --------->ARR14(2)           <---------TOE2(3)                 <---------ALFIN1        ----          <---------ARR14(2)          --------->MYB52(1)              --------->ANAC46        <------          --------->ARR11(3)        <---------MYB52(2)              <---------ANAC55(2)       ------- --------ANAC58           --------->HSFB2a(2)--------->AHL20(2)     --------->ANAC46  ---------->DOF2 --------ANAC58 <---------ANAC46    <---------MYB46(2)              --------->ANAC58 <---------AHL20(2) >GT1  >>>>>>>>>TBF1 <-------TEIL   --------->MYB46(3) <---------ETT(2)----------->RAV1(1)    ------- --------ANAC46 <---------ANAC58  <-----------GT1---------->DOF2    --------->ANAC55(1)       ------- --AHL20(2)     <---------ANAC58 --------->AHL20(2)--------->DAG2   --------->ANAC58 --------->AHL20(2)   ttcgtagaagaagaactggcatgttcatctcgaaattaactaacgaataaaaaaaggtagacaacttaatacgccacacaactctaataaaagaacatgt  3122700                                                                             <---------YAB1                                                                           <---------AHL20(2)                                                                           <--------HAHB4                                                                           -------->ATHB1                                                                           --------->ATHB51                                                                           <---------ICU4                                                                           -------->HAHB4                                                                           --------->YAB1                                                                          <---------YAB1                                                                          --------->ICU4                                                                          <---------ATHB51                                       <---------ANAC58                 --------->YAB1                                       <---------ANAC58                 <---------ICU4   <---------YAB1                    <-----------GT1                   <---------YAB1 --->TEIL                        <---------AHL20(1)                    --------->ICU4 ---ANAC55(2)                    --------->AHL20(1)                   <---------AHL20(2) -->ANAC55(1)              --------->YAB1                            --------->YAB1                 - -->ANAC55(2) ----------->GT1  <---------AHL20(1)--------->AHL20(2) <---------YAB1              ----- ---->GT1    <---------TOE2(3)--------->YAB1   <---------GLK1(2) <---------YAB1           <---------WRKY18(1)   aacttatgacaaaataatgtaacatttgttcataatatttttcgtatcagattatatatacaaattgctgattataattattattcgctgtttgaccaaa  3122800                 <---------At4g35610        <---------ICU4        --------->ATHB51                                              <---------AHL20(1)        --------->ATHB12                                     <---------MYB111(2)        -------->ATHB1                           <---------MYB52(1)   --------->AHL20(1)       --------->AHL20(1)                       --------->TOE2(3)--------------->AGL15       <---------ATHB51                <---------AHL20(2)    <---------MYB46(2)       <---------AHL20(2)              --------->AHL20(1)    --------->MYB46(3)       <---------YAB1                  --------->AHL20(2)    <---------MYB52(2)       --------->ICU4                  <---------AHL20(1)    <---------MYB111(1)    <---------AHL20(2)                --------->AHL20(2)<------MYB83 --------->YAB1        <---------    --------->AHL20(2)                <---------AHL20(2)----------->GT1                   <------MYB83 --------->AHL20(2)                   --------->YAB1    <------MYB46(1)<---------ICU4   <---------WOX13(1) -------->AHL20(2)             ----------->GT1 --------->ANAC46-------->P              <------------CBF ---->AHL20(2)   --------->At4g35610 <---------YAB1   <---------WOX13(1)  <-----------GT1 <------MYB46(1)   aaataaaaaattattgtttcgctgagaaatgtatagataattatattatacgttagattggtaactaccaaaaatattactatatgttagattggtcaca  3122900                                            --------->AHL20(2)                                            <---------AHL20(2)                                           --------->AHL20(2)                                      --------->ANAC55(2)                                      <---------ANAC58                                      <---------ANAC58                                      <---------ANAC55(1)                                      >>>>>>>>>>HY5                                      <---------ANAC46                                      <---------ANAC55(2)                                     ----------->STF1                                    <---------TGA2(2)                                   ----------->TGA1                            <---------AHL20(1)                            --------->AHL20(2)               --------->ANAC58                 ----------->GT1 <---------ICU4              --------->ANAC58                 <---------ANAC46--------->YAB1           *TSS                 <---------ZAT6<---------YAB1         <------MYB46(1)                     --------->ANAC58           --------->DAG2   --------->AHL20(1)   --------->DAG2                           --------->ANAC46     ---------->DOF2   ------------>CBF  ------->TEIL <------MYB83                        --------->ANAC58 --HVH21 ---------->DOF2    <---------AHL20(2)  ---------->DOF2               <----------DOF2   aaataagaaaagaaaggtagtgtatatcaatttattaatgacgtatttaataaagttggtctcaagcgaaatgaattgttctttactgctacaaggcata  3123000                     <---------MYB46(3)                     <------MYB83                    --------->ALFIN1             --------->GLK1(2)                                                                 ------             <---------ARR11(3)                                                                <-----             --------->ARR11(3)                                                               -------             --------->ARR14(2)                                                             <--------             <---------ARR14(2)          <---------DAG2                                     ---------        ----------->GT1           <----------DOF2                       ----------->RAV1(1) <--------      ---------->DOF2<------MYB46(1)     <----------DOF2     ---------->DOF2                ---------   ------>ZmHOX2a(1)<---------AtMYB61---------->ID1      --------->TOE2(3)       --------->GLK1(2)  -   taatcctgtaaagaaaatctgggtggtcgaattgttcttttccctttttctaatttcaacatcaaaagttgttccaccagaagaatttgttctctgcagc  3123100                                                                                               <-----                                                                                               <-----                                                                                           <------NtERF2                                                                                          <---------RRTF1(1)                                                                                          ------>NtERF2                                                                                          <---------RAP2.3(1)                                                                                          <---------ORA47(2)          ------>ZmHOX2a(2)                                                               <---------ERF1         <------ZmHOX2a(2)                                                               <---------RAP2.6(2)     <------ZmHOX2a(2)                                                                   <---------DEAR3(1)    --------->ARR11(3)   --------->ANAC58                                                <---------RRTF1(3)    <---------ARR11(3)   --------->ANAC58                                                <---------RAP2.3(3)  --------->ICU4         --------->ANAC46                                                <---------ANAC46 --->At4g35610     <---------ANAC58                                                      <---------RAP2.3(2) ----At4g35610     <---------ANAC58                                                      <---------DREB2C(2) ---->RAV1(1)      <---------ANAC46                                                      <---------RRTF1(2) -ZAT14 --------->ARR14(2)                                                          <---------AtLEC2 >At4g35610    <---------ANAC58          --------->ETT(2)                        <----------DOF2 -At4g35610  <---------MYB52(1)          <---------ETT(2)                   <---------AtMYB61 ------- >ZAT14 <---------ARR14(2)  ----------->GT1                         <---------At4g35610 --------->RAP2.6(3) --------->DOF2<---------ANAC58     --------->YAB1  --------->CCA1(2)    <-----------RAV1(1)<--------   agtaaagatcgatccgttcttgcttacaagcagaaaaatcatatcgacagagagagatgagacagaactcagcaactggtggtctttcatggcggcgttt  3123200                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                                        ---------->ID1        <XXXXXXXXXXXXXXXXXXXXMIR1886.1                                     <-------TEIL <---------ARR14(2)                         --------->ARR11(3)       --------->ARR14(2)                         <---------ARR11(3)       <-----------ARR10                         <---------ARR14(2)       --------->AGP1                  <---------ARR14(2) ----ARR14(2)            --------->ARR14(2)      <---------CCA1(2)                --------->ARR14(2) ----ZAT14      <------MYB46(1)  <---------TOE1(2)<---------ARR11(3)   <---------DAG2    <---------At4g35610 -->DOF5.7(2)   <------MYB83     <---------TOE2(3)<---------AGP1       <----------DOF2   --------->At4g35610 -ANAC46    --------->ATHB12     <---------TOE2(2)--------->ARR11(3)<-----------GT1   ------>ZmHOX2a(1)   actgttcttcgcttcgattggtttgcagttcttcttaggttcgtcttcttcagatctatctgatttcatttcacttttttgtagaatcctcatctgattt  3123300                                                                                               ------                                                                                               ------                  <---------GLK1(2)                                                            ------                <---------TOE2(3)                                                              ------                <---------TOE1(3)                 --------->At4g35610                     <---------ICU4                --------->MYB59                   <---------At4g35610       <---------ZAT14   <------            <----------DOF2                 <---------YAB1      <----------DOF2       <---------AHL20(2)     <----------DOF2                  <---------TOE2(3)     ---------->ID1  --------->ZAT14<---------   agtattcctttgggattttaggttctcaattcgctagatttatgttatatttagctcaacttggctctttctaaatactacagtgtgtttaatctttacg  3123400                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                                               <---------ARR11(3)                                                               <-----------ARR10                                                               <---------ARR14(2)                                                               --------->ARR14(3)   <---------ARR11(3)                                          <---------ARR14(3)   --------->ARR11(3)             --------->CCA1(2)            --------->ARR11(3)  <------MYB83              --------->AtLEC2                   <---------AGP1  <------MYB46(1)    ----------->GT1 <------ZmHOX2a(1)         --------->ARR14(2) --------->MYB59     =======================HOX2a_HOX2a       <---------CCA1(2) --->ANAC58        --------->ARR14(2)===================================HOX2a_HOX2a --->ANAC55(2) --------->YAB1    <---------ARR14(2)  <----------DOF2 --->ANAC46   <------ZmHOX2a(2)  --------->ARR14(2)--------------->AGL15 --->ANAC58   ==============================HOX2a_HOX2a      ----------->ARR10 -----------AGL1  <------ZmHOX2a(1)  ==================================HOX2a_HOX2a <----------DOF2 -DOF2<----------DOF2------>ZmHOX2a(2)             <---------------AGL15   <---------ATHB12   cattaggtcttttgcgatcaggatcgaaacatgcagataggaagattgtatttctcttttgagtagatcttggccaaatcactaactttgtgcttaacat  3123500  Previous    Next  AGI:  At1g09640.1    Description:  elongation factor 1B-gamma, putative / eEF-1B gamma, putative. Identical to Probable elongation factor 1-gamma 1 [Arabidopsis Thaliana] (GB:O04487); similar to elongation factor 1B-gamma, putative / eEF-1B gamma, putative [Arabidopsis thaliana] (TAIR:AT1G57720.2); similar to elongation factor 1B-gamma, putative / eEF-1B gamma, putative [Arabidopsis thaliana] (TAIR:AT1G57720.1); similar to Os02g0220600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046318.1); similar to Os02g0220500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046317.1); similar to Elongation factor 1-gamma 2 (EF-1-gamma 2) (eEF-1B gamma 2) (GB:Q6YW46); contains Int Range:  from: 3119880    to: 3122528    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g09645.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G57765.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46867.1) Range:  from: 3122958    to: 3124580    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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