Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              ---------->DOF2                 ----------->GT1           --------->AHL20(2)               <---------ANAC46      --------->ANAC58             --------->ARR14(2)      ------>MYB83             <---------ARR14(2)      -------->P        ------>MYB83  --------->YAB1 --------->ANAC58                                      <---------MYB52(2)        ------>MYB46(1)              >>>>>>>>>MYB98                             <---------ANAC58       --------->MYB52(1)            ------>MYB46(1)                 <----------DOF2     <-----------ARR10      --------->AtMYB61             ------>MYB46(1)             --------->ANAC46<---------ANAC46     --------->MYB46(3)             ------>MYB83            <-----------HVH21   <---------ANAC58     <---------MYB52(2)          --------->ANAC46        <-----------ARR10 --------->ARR14(2)     <---------MYB55(2)     --------->TOE2(3)           <---------CCA1(2)  <---------GLK1(2)      --- ---->DOF2------->GAMYB    <---------ANAC55(2)        --------->ANAC46     <---------ARR14(2) -------   agcccaaaccaacggtatcgggtattatcacctaaacccaacccattaaagacaacgcgtagcttcacgcgcttcacgattcgcgtgagaagaactaacc  3093400                                                       <---------YAB1                                                       --------->ICU4                                                     --------->YAB1         <---------MYB46(3)                         <---------AHL20(2)        --------->SPL7                           --------->AHL20(1)       ------>NtERF2     --------->ALFIN1        <---------AHL20(1)                            ------      --------->DEAR3(1)<-----------HVH21 ----------->GT1<---------GLK1(2)                     ------ ---------->DOF2     <---------TOE2(3)  <---------ANAC58-------->HAHB4      --------->YAB1     ------ ------>LBD16        <---------At5g28300<---------ANAC46<---------ICU4   --------->YAB1--------->ANAC58 ->P<---------LBD16 --------->MYB52(1)  <---------ANAC58<--------ATHB1  <---------YAB1 --------->ANAC58   ctgaaacgcggacgttgcagattaacggtgaggcatgaacgagcgtgttaatatataatgattcttctctcacgatgatcaaaatacagaagccaacaag  3093500                                                               <---------WOX13(1)                                                             --------->ATHB12                   <----                                                             <---------ICU4                    ------                                                             <--------ATHB1                    <-----                                                             -------->HAHB4                 ---------                                                             --------->ATHB51               <--------HAHB4                                                            <---------YAB1                  -------->HAHB4                                                          --------->YAB1                    <--------                                                         <---------YAB1                     ---------                                             --------------->AGL15                          <--------ATHB1                                       <-------TEIL <---------ANAC55(2)                    <---------YAB1                                 ----------->RAV1(2)--------->ANAC55(2)                    <---------ATHB12                                 <---------ANAC55(2)<------MYB46(1)                        --------->AHL20(2)                                 --------->ANAC55(2)<------MYB83 --------->YAB1            <---------ATHB51                               <-----------GT1      ----------->GT1                        --------->ICU4                            <---------ICU4   <----------DOF2<---------ATHB51             --------->YAB1                           --------->AHL20(2)<---------DAG2 --------->ICU4        --------->ANAC58 ----->GT1               --------->TOE2(3)   <---------------AGL15   ----------------------->TaNAC69(2) --->ANAC58           ----------->RAV1(1)   <-----------------AGL3  <---------ICU4--------->ANAC58  - --->ANAC58           =======================RAV   --------->MYB59 <---------YAB1 --------->ANAC46 --   taaaattagtttatgcagataagacaacatttattacctgatacatactttattaggtgataataattgataattgttttttataagccactaataatta  3093600    --------->AHL20(2)    --------->AHL20(1)   --------->YAB1<---------ANAC55(1) --------->AHL20(2)    ---------->DOF2 -----AHL20(2)   <---------ANAC58                                                                  -- --->AHL20(2)    <---------ANAC46                                                                <--- ----AHL20(2)    ----------->GT1                                                               >>>>>> >YAB1--------->YAB1--------->REM1(2)        --------->AHL20(2)                              <------- -ICU4--------->AHL20(2) --------->ANAC58  --------->TOE2(3)                                --------- >ATHB51   --------->ZAT6--------->ANAC58 --------->YAB1                                    --------- -------->YAB1  <-----------------------TaNAC69(2)                     ------>ZmHOX2a(2)    --------- ------->AHL20(2)<---------ANAC58   <---------ZAT6          ---------->DOF2                 ---------   aataaaaataatatcagtaccgtgtaaaagcaaaactagtgtaaacataaattttcaattggcaaagctctgatccatccgttttagtaattcgttgacc  3093700                                                            --------->ANAC46                                                            --------------->AGL15                                                            <---------------AGL15                               ----------->GT1             ----------------->AGL1                             ---------->DOF2               ----------------->AG --------->HVH21           --------->ANAC58          <----------DOF2 -------DOF2               --------->ANAC58          <---------DAG2 >>>>>>WRKY18        <---------ANAC58               <---------ANAC58 --WRKY18(1)         <---------ANAC58               <---------ANAC58 >WRKY38(1)          <---------ANAC46           <---------ANAC46 >WRKY12             --------->ALFIN1           <---------ANAC58                                   <- -->HVH21        --------->At4g35610            <---------ANAC58           <-----------GT1   -------- >WRKY45         <---------At4g35610       <-----------RAV1(1)        ---------->DOF2------------>CBF   tttgacatttcacttagacagatgtgtgcaagaaagaaaaacagcatgttgcttgctttttccctcaacgagaaaagtcaccctctcttcaattcttcaa  3093800                                                                              --------->ZAT6                                                                              --------->AtMYB61                                                                              <---------ALFIN1                                                                             --------->MYB46(3)                                                                           --------->AtMYB61                                                                           --------->DEAR3(1)                  <---------YAB1                                           xxxxxxxxxxxxxxxxx>smallRNA(se3)                  --------->ICU4                                           <---------ALFIN1                --------->YAB1                                            --------->MYB46(3)                --------->TOE1(3)                                       --------->AtMYB61             <-----------GT1                                            --------->DEAR3(1)       <---------DAG2     <---------AHL20(2)                            <---------ALFIN1       <----------DOF2    --------->AHL20(2)                           --------->MYB46(3)   ------>ZmHOX2a(1)  <---------AHL20(2)                               <---------MYB55(2)         <-- ----------GT1  --------->TOE2(3)                                    <---------ALFIN1             <-- ---->CBF----------->TBP--------->TOE2(3)*TSS--------->MYB46(3)   --------->PCF2    --------->TOE2(3)   ttctcctccctttataaaccataattcattaattctcttctctctcaacaactacttgtttagagagagtcccaccaccaccactaccacaatcccaatg  3093900                                                                      <<<<<<<GRF7                                                                    ----------->HVH21                                                                    =======================HOX2a_HOX2a                                                                    ------>ZmHOX2a(1)                                                                  ------>ZmHOX2a(2)                                                                 <------ZmHOX2a(2)                                                                --------->ARR14(2)                                                                <---------ARR14(3)                                                                <---------ARR11(3)                                                                --------->ARR11(3)                                                                --------->ARR14(3)                                                                <---------GLK1(2)                ----                                                                <---------ARR14(2)               ----                                                                --------->AGP1                   <---                                                               <---------GLK1(1)                 <---                                                               --------->GLK1(1)             <-------                                                               <---------At4g35610--------->ARR14(3)                                                              ----------->ARR10   <---------ARR14(3)                                                            <---------At4g35610   <---------AGP1 <---                                                          <---------LBD16         <---------ARR14(2)                                                         ------>ZmHOX2a(1)        --------->ARR14(2)                                                         ================HOX2a_HOX2a        <--------                                                         ===============HOX2a_HOX2a--------->GLK1(1)                                   --------->DEAR3(1)    =================================HOX2a_HOX2a                                <---------ALFIN1         ==================================HOX2a_HOX2a                                --------->DEAR3(1)      <---------ALFIN1          <-----------ARR10--                                --------->AtMYB61     ------>ZmHOX2a(1)           <---------ARR11(3)                               --------->MYB46(3)     ====================================HOX2a_HOX2a      ------>MYB83           --------->ANAC46         ===================HOX2a_HOX2a      <----------      ------>MYB46(1)       ------>ZmHOX2a(1)         ==================HOX2a_HOX2a<---------GLK1(1)      -------->P         ------>ZmHOX2a(1)            =====================================HOX2a_HOX2a    --------->MYB46(3)  <---------ALFIN1         <---------At4g35610======================HOX2a_HOX2a --------->REM1(1)    ------>ZmHOX2a(1)   ===============================HOX2a_HOX2a------>ZmHOX2a(2) -------ANAC58       <---------ALFIN1     ==============================HOX2a_HOX2a<------ZmHOX2a(2) -------ANAC58     ------>ZmHOX2a(1)      ------>ZmHOX2a(1) --------->LBD16       --------->ARR11(3)   gcttcaccaactcttactctcctcctcctcctcaccaccgtctccttcttcatctcctcctccgcagatcctgacatgcttcaagatctctgcgtcgctg  3094000 ----->ARR14(2) ----->ARR11(3)                                  ---------->DOF2 ------ARR14(2)         <----------DOF2     ------>ZmHOX2a(1) --------ARR10--------->AtLEC2              --------->HSFC1(1)                     <----------DOF2 --At4g35610<---------ANAC58          <----------DOF2                            ---------->ID1 ------ARR11(3)        --------->TOE1(3)    <---------HSFB2a(2)                 <-----------GT1 -DEAR3(1)  <---------ANAC58      <---------CCA1(2)    <-------TEIL      <---------ANAC58        ---- ---->ZmHOX2a(2)       --------->TOE2(3)    --------->HSFB2a(2)          <---------ANAC58    <------ZmHOX2a(1) -HVH21  <---------MYB52(1)  <----------DOF2<---------HSFC1(1)        <----------DOF2     <---------AtLEC2   atcttccctctggtacttgcaaaaacctttactttcatctcttttcctagaaaaagattcaatttctaatctctttcttgtttttcttttttgcaggaat  3094100                                      --------->bZIP60(1)                                      <---------bZIP60(1)                                      --------->TGA1a                            --------->ZAT2                            <---------At4g35610                            <---------ZAT2                        --------->ANAC46                                                ----------->RAV1(1)                        --------->ANAC58                                               --------->MYB46(3)                        --------->ANAC58   <---------At4g35610                        ------>MYB46(1)                   ---------->DOF2<-----------HVH21         --------->ANAC58         --------->ANAC46         <---------ANAC58   --------->At4g35610 --------->GLK1(1)            <-----------ARR10   <---         <---------ANAC58  ------->TEIL    --------->At4g35610     --------->At4g35610------>MYB83  - ----->YAB1        =============================bZIP_DOF    --------->ANAC58 <---------ARR11(3)  <---   caaaatcaatggcttcccttgcaaagacgcagctacagtcacatcagccgatttcttctcacaaggattagctaaaccaggtcttaccaacaacacattc  3094200                                                                                                    -                          --------->YAB1                                          <-----------RAV1(2)                   <---------TOE2(3)                                            ------->TEIL       --                  <---------DOF5.7(2)                                           ----------->RAV1(1)--                  --------->MYB52(1)         ------->GAMYB                     --------->ANAC46    --                <---------MYB52(2)          <---------ALFIN1                 --------->ANAC58      ==          <-----------RAV1(2)      --------->LBD16                           --------->ANAC46      --      <-----------HVH21  <---------YAB1    <---------REM1(2)         --------->ARR14(2)            --  --------->TOE2(3)<---------TOE1(3) <------ZmHOX2a(1)               <---------ARR14(2)           --- ------ANAC58  <---------At4g35610 <---------TOE1(2)                <---------CCA1(2)<------ZmHOX2a(1) ----->NtERF2  --------->At4g35610<---------LBD16           --------------------->WRI1            --- ------ANAC58<------ZmHOX2a(1)   --------->TOE1(2)     --------->ATERF1(1)   --------->ANAC58    <---   ggtgccttagtcacaggagctaacgttatgacaatcccaggactcaacacacttggtgtctccctctctcgtatcgactacgcaccaggaggcttaaacc  3094300  Previous    Next  AGI:  At1g09560.1    Description:  GLP5 (GERMIN-LIKE PROTEIN 5); manganese ion binding / metal ion binding / nutrient reservoir. Identical to Germin-like protein subfamily 2 member 1 precursor (GLP4) [Arabidopsis Thaliana] (GB:P94014;GB:O80538;GB:P94097); similar to GLP10 (GERMIN-LIKE PROTEIN 10), manganese ion binding / metal ion binding / nutrient reservoir [Arabidopsis thaliana] (TAIR:AT3G62020.1); similar to germin-like protein 2 [Vitis vinifera] (GB:ABH09468.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Germin; (InterPro:IPR001929); contains InterPro domain Cupi Range:  from: 3093841    to: 3094866    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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