Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           >>>>>>>>>MYB98       ------>ZmHOX2a(1)    --------->ARR11(3)      <---------MYB59      <---------CCA1(2)  --------->TOE1(1)       <---------ARR11(3)  --------->TOE2(1)       --------->ARR11(3) ------>ZmHOX2a(1)        <---------AHL20(1)                                             ----------->GT1 ------GLK1(1)    ----------->HVH21               <---------YAB1                  --------->YAB1  <-- ---->ARR14(2)  --------->ANAC55(2)     <---------AHL20(2)  <----------DOF2      <---------YAB1   --- -----ARR14(2)  <---------ANAC55(2)    --------->AHL20(2)   <---------DAG2    --------->ICU4  <------   ttcctcgtcctaacaaatacttgacgaatatatctagactataaaattggttatgagttctacttttttttgtttgtgaaattatcaaaatttgttatat  3066400                                       <---------AHL20(2)                                       --------->AHL20(2)                                      <---------AHL20(1)                                      --------->AHL20(2)               --------->AHL20(2)     <---------AHL20(2)               <---------AHL20(2)  --------->AHL20(2)      <---------AHL20(2)           <---------AHL20(2)                                               -  --------->AHL20(2)              --------->AHL20(2)                                             <---  <---------AHL20(2)          --------->ICU4                                                     <--- <---------AHL20(2)  <---------------AtSPL8                                                     ----- -------AHL20(2)     --------------->AtSPL8                        <-------TEIL                 <---- ------>AHL20(2)<---------AHL20(2)<---------AHL20(2)              --------->CCA1(2)      <---------ANAC46 ---YAB1   <---------YAB1  --------->ICU4                      <---------TOE2(3)       ----------->GT1   ttatttatttattctcattaatttgagtactaatttttaaattatttatactaaaaacaattactaagatacaaaaatggataagagcatggtgtataga  3066500                                                                <----------ID1            --------->ANAC58                        --------->ATHB51                      --------->ANAC58            --------->ANAC58                        <---------ICU4                        ----------->GT1            --------->DAG2                       <---------YAB1                         --------->ANAC58          ---------->DOF2 <---------AHL20(2)    <---------ATHB12                     ---------->DOF2        ---------->DOF2 -------->AHL20(2)     <---------ATHB51                    <------ZmHOX2a(1)   >>>>>>>>>>WRKY26 ------RVE1(1)         --------->ICU4                    --------->ANAC58      >>>>>>>>>>WRKY43 ------CCA1(1)      <---------------AGL15                --------->ANAC58      >>>>>>>>>>WRKY38 ---->ARR11(3)      --------------->AGL15            <---------ANAC58         --------->WRKY38(1) -----ARR11(3) --------->KAN4(2)                     <---------ANAC58         --------->WRKY12-------   tatttaatgggatagaatatttcccataattgtatgtgtgtgagaggttttgttttcgtaaggaaagaaacaaaaaccatttgaccaaagaaaagcaaaa  3066600                                                                           <---------ANAC46                                                                        ----------->HVH21                                                                       <-------MYC2                                                                       ------->MYC3                                                                       ------->MYC2                                                                      <---------O2                                                                      --------->O2                                                                      --------->ANAC58                                                                      --------->ANAC55(2)                                                                      --------->bZIP60(2)                                                                      --------->ANAC55(1)                                                                      --------->TGA1a                                                                      --------->ANAC58                                                                      ====================bZIP_DOF                                                                      <---------TGA1a                                                                      --------->ANAC46                                                                      <---------ANAC55(2)                                                                 ----------->HVH21                                                               <---------TGA2(1)                                                               --------->TGA2(1)                                      --------->MYB52(1)       --------->bZIP60(1)                            --------->ANAC46      --------->YAB1<-----------TGA1                            --------->ANAC58      --------->TOE2(3) <---------ALFIN1          <------                            --------->ANAC58     <---------YAB1<---------ANAC58               <------                 --------->MYB46(3)  --------->ICU4            <---------ANAC58---------->DOF2<------    --------->ANAC58      <---------AtLEC2    <---------MYB52(1)<-----------HVH21     <---------O2    --------->ANAC58 <-----------RAV1(1)   ------->TEIL        <---------bZIP60(1)  --------->CCA1(2) --->DOF2      ----------->RAV1(1)   <---------ATHB51 <---------TOE2(3)<-------MYC3<----------ID1   gaaggcaaggaatcaaacaacaaatgttgcaaggcagaaataatggacgttatgttaatgtagtgtcgtcacacgtgacttaaaagagacgagtctgcgt  3066700                                                                      <-------MYC2                                                                      ------->MYC2                                                                      ------->MYC3                                                                      <-------MYC3                                                                   <---------ALFIN1                                                                   ------->GAMYB                                                                  --------->MYB46(3)                                                                 ------>MYB46(1)                                                                 -------->P--------->ZAT6                                                                 ------>MYB83                                                                --------->MYB55(1)                                                                --------->ANAC46                                                               <---------MYB46(2)                                                               <---------MYB55(2)                 ---                                                               --------->MYB46(3)                ----                        <---------AHL20(2)                     <---------MYB111(1)              -----                       --------->YAB1                          <---------MYB111(2)         ----------                      ----------->TBP                          --------->AtMYB61           <---------                    --------->YAB1                     *TSS   --------->MYB46(3)        --------->ANAC46 ---ANAC58    --------->ANAC58             <----------DOF2   -------->P--------->AtLEC2 --------->ANAC58 ---ANAC58    --------->ANAC58          --------->ARR11(3)   ------>MYB46(1)            --------->ANAC58 ---ANAC46   ------->TEIL               <---------ARR11(3)   ------>MYB83 --------->ZAT18 -----------   gtcaaactaaaaatgtatgcaactataaaaatgggatttgattatctttttagtaccgaagcctaccaaccacatgcacactaattctactcgccaaata  3066800                                                 <---------LBD16                                                --------->MYB52(1)                                             --------->At4g35610                                             --------->ZAT2                                             <---------At4g35610                                             <---------ZAT2                                             <---------HSFB2a(1)                                             --------->HSFC1(2)                                             --------->HSFB2a(1)                                             <---------HSFC1(2)                                            <---------ARR14(2)                                      <---------ARR14(2)                                      --------->ARR14(2)        --------->CCA1(2)            ----------->HVH21   ---------->DOF2          --------->ALFIN1<-----------ARR10          ------>ZmHOX2a(2)          <-- -------->GT1            --------->DAG2     --------->ARR14(2)  <---------ANAC46           --------->LBD16 ----->DAG2              <---------AtMYB61--------->LBD16    <---------ANAC58             <---------ANAC58 ----->DOF2            ---------->DOF2--------->MYB52(1)     <---------ANAC46        <----------DOF2 ----->AGL15          <------ZmHOX2a(1) <---------LBD16      <---------ANAC58  <----------DOF2    --- ------AGL15  ----------->HVH21    --------->ANAC46 <-----------HVH21--------->ARR14(2)   <---------ANAC58 ------>AGL3 <---------ANAC46   <---------DEAR3(1) --------->LBD16   <---------ARR14(2)   <---------ANAC46   aagtgaaaagagatggctgatggaggaaaggtggtctgcgtaaccggagcttccggttacatagcgtcttggatcgtcaagcttttgctcttccgtggct  3066900                                                                         ------>ZmHOX2a(1)                      --------->ANAC58                            --------->GLK1(1)                      --------->ANAC58                            <---------GLK1(1)            <------NtERF2                                    ----------->RAV1(2)           ------>NtERF2                                    ------>ZmHOX2a(1)   <---------YAB1 --------->HSFB2a(2)                   <-----------GT1 --------------------->WRI1 -------ALFIN1<---------SPL7     <---------GLK1(1)  <----------DOF2     --------->TOE2(3) ------>REM1(1)   <---------HSFB2a(2)           <----------DOF2------>ZmHOX2a(1)                  <--   acaccatcaatgccaccgttcgagacccaagtttgaattccttcttctctctttcttttttcctcctgatttctccttagtaatatcgaagacaatccct  3067000                                                                                                <----                                                                                                -----                                                  --------->ANAC46                        <---------ARR14(2)                                               <-------TEIL                               --------->ARR14(2)                                              --------->CCA1(2)                      --------->ANAC58                    ---------->DOF2 <---------------AGL15                            --------->ANAC58 <-----------HVH21 --------->YAB1   <----------DOF2 ----------->HVH21            --------->At4g35610 --------DOF2   --------->YAB1      --------------->AGL15               <---------TOE2(3)--------->GLK1(1)   ctttgtcactcacttgaataatcaaagttatctagatgctttttagagatacaagtgacaattcagagaaaattaagaatattagctaagcaaatccaac  3067100                               <---------YAB1                              --------->SPL7                            <---------SPL7                          <---------------AtSPL3                          --------------->AtSPL8                    <------MYB83                                                                  ---                    <------MYB46(1)        <------MYB83                              ---------->DOF2       ---------->DOF2 <-------TEIL        <---------MYB46(3)                    <---------------AGL15 -----MYB52(2)     --------->MYB59         <------MYB46(1) --------->DAG2        --------------->AGL15 ---->MYB46(3)     <---------TOE1(2)     <--------P       ---------->DOF2       <-----------------AGL1   tatccaagagaaagtattttgtaggtacttggtacgattaagagttggttctatggccaaaaaagtatgtttttggtttcattctctaaaaggaagtata  3067200                                               ----------->GT1                                               <---------ANAC58       --------->ANAC58                        <---------ANAC46       --------->ANAC58                        <---------ANAC58     --------->MYB52(1)               --------->CCA1(2)   <---------MYB52(2)                --------->ARR14(2)   --------->MYB46(3)           <---------ANAC46                                              <------ ------>TOE2(3)       ------->TEIL   <---------ARR14(2)  <---------AtMYB61       --------->AHL20(2)--   cattaacaaacgaaaattcaaatgaactcacatgtagtggatatagatggggtgaaactttggtcgatgtttagagccaaaaactaaataagcatttatg  3067300  Previous    Next  AGI:  At1g09500.1    Description:  cinnamyl-alcohol dehydrogenase family / CAD family. similar to cinnamyl-alcohol dehydrogenase family / CAD family [Arabidopsis thaliana] (TAIR:AT1G09510.1); similar to unknown [Populus trichocarpa] (GB:ABK95157.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 3066755    to: 3068600    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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