Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <------MYB83                           <------MYB46(1)                          --------->MYB111(1)                          --------->MYB59                          --------->MYB52(2)                     --------->AHL20(2)                          --------->MYB46(2)          ----------->GT1                        <---------MYB52(1)          ---------->DOF2              --------->PCF5                       <------ZmHOX2a(1)            <---------ANAC58                     <---------TOE2(3)            <---------ANAC58  <-------TEIL================HOX2a_HOX2a     <---------LBD16         --------->ALFIN1<---------MYB55(1)      <---------TOE1(3)     <---------At4g35610       <------ZmHOX2a(1)<<<<<<<<<MYB98    <------ZmHOX2a(2)     <---------AHL20(1)        --------->STY1(1) <---------LBD16   --------->ARR14(2)    <---------ARR11(3)     <---------AHL20(2)        <---------STY1(1) ---------->RAV1(2)<---------ARR14(2)    --------->ARR11(3)     --------->AHL20(1)<---------At5g28300   aaacctggaggatggggtccctatccgttaggttcggatgagagatcatttaaggaaagtgactaaaatatttagcttcggagttaccgagcctagggct  3057600                                             --------->At4g35610                                             <---------At4g35610                                         --------->ANAC46                                         --------->ANAC58                                         --------->ANAC58                                    <-------                                        ------>MYB46(1)                                     ---------                                 <---------MYB52(2)                                         <--------                                --------->At4g35610                                         <--------                             --------->LBD16 ----------->RAV1(2)                            ---------                            <---------ANAC55(2)<-----------RAV1(1)    <------MYB46(1)  <------NtERF2                         <---------ARR14(2)  --------->ZAT2<---------MYB59             --------->At5g28300                         --------->GLK1(2)  <---------ARR14(2)        <------MYB83  <---------LBD16                         --------->ARR14(2) ------->TEIL  --------->At4g35610      <---------ANAC58                         ------->TEIL   ------>MYB83      <---------At4g35610  --------->ZAT14                    <-----------GT1   --------->TOE1(2)  --------->MYB59       <---------ZAT14                    --------->MYB52(1)--------->TOE2(2)<---------MYB52(1)  <---------WRKY18(1)                <---------TOE2(3)<---------MYB59    <------NtERF2    <---------TOE1(2)----------->GT1               ---------->DOF2 <-----------ARR10  <---------ANAC46<---------STY1(2)<---------ANAC46              <---------AHL20(2)<---------At4g35610<---------ZAT18--------->STY1(2)<---------ANAC58   tcgaattttgtgtcatttaaagtaacgaatccgtagctaacctacgcatctggcgcagttagctaacttgctaggtttgactgtagcgcggcaaaatcta  3057700                             --------->ALFIN1                            ------->MYC3                            <-------MYC3                            <-------MYC2                            ------->MYC2                            ------->MYC4                            <-------MYC4                            <-------PIF5                            ------->PIF5                           ==========================================bZIP_DOF                           <---------ANAC46                                                <------ZmHOX2a(2)                           <---------O2                                                ------>ZmHOX2a(2)                           --------->TGA1a                                            --------->CCA1(2)                           <---------TGA1a                                            <------ZmHOX2a(2)                           <---------ANAC55(2)                                        --------->ARR14(1)    ---------->DOF2        --------->O2                                              <---------ARR14(2)    =================================bZIP_DOF                                        --------->ARR14(2) --------------WRI1        <--------ABF1                  <----------DOF2            <---------ARR11(3) >ARR11(3)            --------->ANAC58                    <---------DAG2             --------->ARR11(3) ---ARR10             --------->ANAC58    <---------DOF5.7(2)    ------>NtERF2      --------->GLK1(1) -ARR11(3)          ---------->DOF2   <---------ZAT6   <---------ALFIN1             <---------GLK1(1) >GLK1(2)           =================bZIP_DOF       <---------PCF5             <---------MYB52(1)   ttcgttcaaagttcaaactatagaaagccacgtgtgcatagtgtaaacgtagtcggaccacttttgcagccatatcaaaccgttggagatccgatcgaat  3057800                 ---------->DOF2               <---------AHL20(2)           <---------CCA1(1)           <---------RVE1(1)                                 --------->ANAC58          --------->AHL20(1)                       <---------ANAC58          <---------ARR11(3)                       <---------ANAC46          --------->ARR11(3)                       <---------bZIP60(2)      ---------->DOF2      <---------ANAC58        <---------ANAC58         ---------->ID1    --------->ANAC58       <---------AtLEC2     <-----------RAV1(1)     <----------DOF2            --    --------->ANAC58       <---------ANAC58<---------ARR14(2)--------->ANAC58               ------>ZmHOX2a(1)    --------->ANAC46  <----------DOF2      --------->ARR14(2)<---------ANAC55(2)       ------>ZmHOX2a(1)   acaactacgaaagatattaaaaagcttttgcatgagtaatgtcccgatttgtgtcgtgttgataagtaagttatctttttcccttcatcctttcctcata  3057900                                              <----------DOF2                                    <------------CBF                                   <---------ICU4                                   --------->ATHB51                                   <---------AHL20(2)                                   -------->ATHB1                                   -------->HAHB4                                   --------->ATHB12                                  <---------ATHB51                                  <---------YAB1                                  --------->ICU4                                                    <            ----------->TBP    <---------AHL20(2)      <---------TOE2(3)                            -       ------->TEIL            --------->AHL20(2)  <---------YAB1       <---------At4g35610         <  <------------CBF       <----------DOF2    ------->TEIL <------ZmHOX2a(1)     <---------AtLEC2   --- ------->YAB1            <---------DAG2  <---------WOX13(1)        <---------ZAT6             -------   ctcatattgaatctataaacagaacaactttttttaattattgatggacttttattttaggaatgaagagagttagatgatgcatgaaatggcatacaaa  3058000          --------->DAG2    --------->ALFIN1                                                                    <---------ARR14(2)  --------->ALFIN1                                                                      --------->ARR14(2) ---------ANAC58                            ------>ZmHOX2a(1)                          ============== -------->ALFIN1                  --------->ZAT18                             <---------DAG2 ---------ANAC58                  <---------ZAT18                             <----------DOF2 ------>ALFIN1                    --------->ZAT14                             --------------->AGL15 --->DOF2---------->DOF2          <---------ZAT14                      <---------ZAT6  <------ZmHOX2a(1)   gtgtgtgtggagaaagtgaagagtttgggaattgagttcactactcctatagaagaaaccctcagagacactattgttagccttatggaggattgtcttc  3058100        ------>ZmHOX2a(1)                                             <---------AtLEC2      ------>ZmHOX2a(2)                                     --------->YAB1    <---------ARR11(3)                        <-----------GT1  --------->YAB1    --------->ARR11(3)                    <--------P     <-----------GT1                <----------DOF2 ============HOX2a_HOX2a       <-------TEIL<---------MYB46(3) <---------YAB1 <------ZmHOX2a(1)   ttatatgatcctcatcatatataggcatatagcttcattttctggttgtttctattttttaactataattttgtatggaggatgtctaggctttacaata  3058200                  <---------AHL20(2)                  --------->AHL20(2)                                              --------->O2           --------->AHL20(2)                                                     <---------O2          --------->AHL20(1)    --------->ARR11(3)                         <---------At5g28300          <---------AHL20(1)    <---------ARR11(3)                         <---------LBD16          <---------ARR11(3)   --------->CCA1(1)                           --------->RAP2.6(3)          --------->ARR11(3) --------->YAB1                               --------->MYB52(1)     <---------AHL20(2)     <---------AHL20(2)             --------->GLK1(2)<---------ANAC55(2)     --------->AHL20(2) <---------AHL20(2)        <----------ID1       <---------------AtSPL3 <---------AHL20(2)     --------->AHL20(2)        ----------->GT1     --------->AHL20(2)           -- <---------YAB1--------->YAB1--------->AHL20(2)---------->DOF2       <---------ATHB12    <---------MYB46(3)   tgtataattaaaaatatttataaattttaaataatatctataaactcagaaaaggagaaatattctgaacaatgaattacggcaacgtgatttgttgaaa  3058300                                                                         --------->ARR14(2)                               <---------ANAC46                          <---------ARR11(3)                               <---------ANAC58                          --------->ARR11(3)                               <---------ANAC58                         --------->RVE1(1)       ------->MYC3      <----------DOF2                                --------->CCA1(1)       <-------MYC3    ---------->ID1                       <---------ANAC58   --------->HSFB2a(2) ------->TOE2(3)      <-----------GT1                       <---------ANAC58   <---------HSFB2a(2)   aacttaacatgtggatgttttttttttctttttgcttatgcatataacatgtaggccttatttcttgtttacaaatatcttctaaaactgaagggccagt  3058400                                       <---------MYB46(2)                            <------NtERF2------>MYB46(1)                           ------>NtERF2 ------>MYB83                           <---------RAP2.6(3)                          --------->RAP2.3(2)                          --------->RAP2.6(2)                          --------->RAP2.3(3)                          --------->DEAR3(1)                         --------->ERF1<---------MYB59                         --------->DEAR3(2)                         --------->RAP2.3(1)                         --------->ATERF1(1)                         --------->ORA47(2)                        --------->At4g35610                          <---------ANAC58                        <---------At4g35610                          <---------ANAC58                 <---------YAB1     <-----------GT1        --------->ZAT6   tttaaacaaggcccatattctaattgagccgccctaatttaccaaaccatttactaattgaacactcccatgcgtttgaagagttgattcttcatttaag  3058500  Previous    Next  AGI:  At1g09480.1    Description:  cinnamyl-alcohol dehydrogenase family / CAD family. similar to cinnamyl-alcohol dehydrogenase family / CAD family [Arabidopsis thaliana] (TAIR:AT1G09490.1); similar to unknown [Populus trichocarpa] (GB:ABK95157.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 3057977    to: 3060663    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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