Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         ------->GAMYB                                                                 --------->ANAC58                                                                 --------->ANAC46                                                                 --------->ANAC58                                                                 <---------ANAC58                                                                 <---------ANAC55(2)                        --------->YAB1                           --------->ANAC55(1)                        <---------ICU4                           --------->ANAC55(2)              ---                       <---------ATHB12                          <---------ANAC58                ----                       --------->ICU4                        <----------DOF2               --------->ARR14(2)                     --------->YAB1                         <---------ICU4            --------->ANAC58                --------->ZAT18                           <---------ARR11(3)          --------->ANAC46                <---------ZAT18                     --------------->AtSPL8  --------->DOF5.7(2) -----                --------->ZAT14                     <---------------AtSPL8  <---------MYB52(1)  <----                <---------ZAT14                     --------------->AtSPL3 --------->TOE2(3)<------ZmHOX2a(2) -------YAB1  --------->At4g35610                  <---------ZAT14    --------->MYB46(3)   <---------ARR14(2) ------>GT1   <---------At4g35610  --------->TOE2(3)<---------------AtSPL3----------->GT1 --------->At4g35610 -----ANAC46--------->ANAC46----------->GT1        --------->ZAT14  --------->MYB52(1)--------->ANAC58   gtgataacttgaatacagcacactaataatgtgttaatcttatacaatcgcagagtagtacatctttacgtaacagacgttaatctacaagcagatcaac  3048600      ------>ZmHOX2a(2)                                                     --------->LBD16     <------ZmHOX2a(2)                                                     --------->ANAC46    <---------ARR14(2)                                                    ----------------->AGL3    --------->ARR14(2)                                                  <---------ARR14(2) ------>MYB52(1)                              <----------DOF2     <-----------GT1 --->GAMYB  --------->AHL20(2)  --------->MYB46(3)       --------->YAB1 --------->ARR14(2) ---->MYB46(3)        <---------ANAC58     <---------TOE1(3)--------->AHL20(2) -----MYB52(2)        <---------ANAC58<---------ZAT6  <----------DOF2   <---------ARR11(3)   aaactggatccaaaatatatgtgtgtgtgcgtcaacaattgtgttaagctttttttctttcattatatatacaatatccgaaaatagagagaagttatag  3048700                 <---------ANAC46                 <---------ANAC58                 <---------ANAC58           <----------DOF2            <-----------GT1   <---------ICU4  <---------HSFC1(1)            <---------TOE2(3) <---------ANAC58                 ---------->DOF2  --------->HSFC1(1)           <-----------GT1    <---------ANAC58         ------>ZmHOX2a(1)    -----  <---------HSFB2a(2)     --------->AHL20(2)      <---------ANAC46<---------ICU4--------------->AGL15  --------->HSFB2a(2)   ----------->GT1      <-----------RAV1(1) <---------YAB1 <---------------AGL15   tcttctagaatagcttttgacttgtgaagtaattaacattttacatgttgttgcttaatctttgttcatcatcgttcctctccttgaaagagaaactcca  3048800                                                     <------MYB83                                                     <------MYB46(1)                                                  <---------MYB52(1)                                             --------->YAB1                                             <---------ICU4                                             -------->HAHB4        --------->GLK1(1)                                          --------->YAB1           <---------GLK1(1)                                        --------->AHL20(2) <-------GAMYB                                        <---------AHL20(2)<------MYB46(1)             --------->AtLEC2           <---------YAB1    <------MYB83<---------LBD16      ---------->DOF2 <---------ANAC58 --------->YAB1<---------MYB46(3)                          <--- ------>RAV1(1)       <---------ANAC58 --------->TOE2(3) --------->MYB59--------->LBD16          <---   acaaattgaaaagccttgcacatcgcttgcgataaaaccaatattaataatcgtttggttcggttagagaaacccggtttaagaacagacaagtcttggg  3048900                                                                 ------>NtERF2                                                                 --------->LBD16                                                                --------->ANAC58                                                                --------->ANAC46                                                                --------->ANAC58                                                               <---------LBD16                                                            <-----------GT1          <-------TEIL                                  <---------HSFB2a(1)         --------->ARR14(1)                             <---------HSFC1(2)        <---------GLK1(2)                           --------->ANAC58     --------->LBD16        --------->ARR11(1)                          --------->ANAC58    --------->LBD16        --------->ARR14(2)                          --------->ANAC46   <---------LBD16        <---------ARR14(2)                         --------->LBD16 <----------DOF2      ----------->ARR10 <---------YAB1           --------->TOE1(2) --------->DEAR3(1) ------ANAC58         --------->YAB1  <---------AHL20(2)--------->HSFB2a(1) <---------ETT(2)       <- ------ANAC58  ------>NtERF2         --------->AHL20(2) --------->HSFC1(2)  <---------ZAT18        <-   cttgaaattagattcggagcccaattttgattttggattttaaattttagacccacgaaatttctcccgccttcccggtccacaacttcgattcaaatcg  3049000                                        --------->ATHB12                <------NtERF2                                       --------->ICU4            --------->ALFIN1                             <-------GAMYB                 --------->TOE1(3)                            <-----------RAV1(1)            --------------->AGL15                            <---------MYB46(3)             --------->TOE2(3)                          *TSS   --------------->AtSPL3    <---------MYB59  ----------->GT1      <----------DOF2   ----------->HVH21                 ----------------->AG --------DAG2           --------->WRKY38(1)               <-----------------AGL3               ------ ---------DOF2         --------->At5g28300                ----------------->AGL3          <---------GLK1(1)   acttttctctttctctctctctctcggtgactgttgcagtactgatttgtgttccctctaacctaaaatggggcagagaggtgaatcaattgagttccga  3049100                                                                   <-------GAMYB                     <----------DOF2                               --------->At4g35610                    <---------ANAC58                        --------->MYB52(2)              <---------ANAC58                              <-----------RAV1(1)                     <         --------->ATHB12                                   <---------MYB46(3)                    <--        <---------YAB1   <---------AHL20(2)              <----------DOF2            --------->bZIP60(1)        <---------MYB52(1)                     <---------TOE1(3)   <---------At4g35610     <---------AHL20(2)       --------->TOE2(3)--------->AHL20(2)     <---------TOE2(3)  <---------MYB46(3)<---------bZIP60(1) --------->AHL20(2) <---------ANAC58    <---------ANAC46<---------ANAC58 ============================ --->LBD16    <---------ANAC58    <---------GLK1(1)     <---------ANAC58 ------>ZmHOX2a(2)--------->AHL20(2)   agtttaaatcgttattgggtttgcttttaaatttcgatttctgtgtgtaaaggtttgtgcgtttgtggcagttgatctatggtctgaggtcattaaatct  3049200                      <---------YAB1              --------->CCA1(2)             <---------ARR14(2)                                         --------->At4g35610             <---------ARR11(3)                                         <---------At4g35610             --------->ARR11(3)   <---------MYB52(1)                    --------->ZAT2             --------->ARR14(2)  <---------RAP2.6(3)                   --------->GLK1(2)      <------ ------ZmHOX2a(1)  --------->TOE1(2)                                 <---------At4g35610  <---------- -------TOE2(3)    --------->TOE2(3)                              ------>ZmHOX2a(1)    --------->ICU4 ======HOX2a_HOX2a --------->TOE2(2)           ---------->DOF2   --------->TOE2(3)----------->GT1   gaggaagaagacggagatatacctaagattgaagccgtttttcagagaagaaagaagcctgataaatcctcagaagctgtcaatttgtaatttttctgct  3049300                                                                                               ------                                                                                           <------MYB46(1)                                                                                           <---------MYB46(3)                                                                                           <------MYB83                                                                                          <---------AtMYB61                                                                                          --------->MYB111(2)                                                                                          --------->MYB46(2)                                                                                          --------->MYB111(1)                                                                                          --------->MYB55(2)                                                                                          <---------DEAR3(1)                                                                                          <---------MYB46(3)                                                                                         <---------MYB55(1)                                                                                         <--------P                                                                                        <-------GAMYB                                             <---------At4g35610                       <------MYB83                                            --------->ARR14(2)                         <------MYB46(1)                                --------->MYB52(2)                                   <---------ANAC58                             <-------GAMYB  ------->TEIL             --------->ARR14(2)--------->MYB55(2)                            ----------->GT1 <---------ARR14(2)       ------->TEIL    <---------ANAC46    --------->ANAC46        <---------MYB46(3)                       <---------ARR14(2)<---------MYB46(3) ---At4g35610            --------->ALFIN1  <---------CCA1(2)        <---------CCA1(2)<---------ANAC58 -GT1                --------->ALFIN1  <----------DOF2    <----------DOF2          <---------MYB46(3)   tcttataccccaaaatttgaaatgtgtgtgtggttatttggctttgtatctgataagtttctttggctgtgtatctgagaaatagtggctggttggtgaa  3049400                        ------->TEIL                  <---------WRKY12                  <---------WRKY38(1)                 --------->WRKY18(1)                <-----------HVH21                <--------ZAP1                                                      --------->TOE1(3)               <------MYB83           --------->At4g35610                          --------->TOE2(3)               <------MYB46(1)        <---------ZAT2                        <---------At4g35610   --------------->AtSPL3             <---------At4g35610   <-----------RAV1(2)   --------->ZAT6   <- ---->DOF2    --------->MYB59         --------->ZAT2 <----------DOF2        --------->At4g35610    <-   aggggctcgtactagttcggtcaatggacccaagagagatagctgggctcgttccctttccaccaggtgtacattctgagcttaaccctaatttgttctc  3049500  Previous    Next  AGI:  At1g09450.1    Description:  haspin-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO17356.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719) Range:  from: 3049026    to: 3053114    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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