Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <-------TEIL             --------->CCA1(2)             --------->GLK1(2)         <------NtERF2     ------>NtERF2     ----------->RAV1(1)     --------->LBD16    --------->ANAC46   <---------LBD16                                 --------->LBD16 ---------HSFB2a(1)                               <---------HSFB2a(2) ---------GLK1(1)                                 --------->HSFB2a(2) ----------ARR10                            <---------------AGL15 ------->GLK1(2)                            ========================================================= ------->ARR14(2)           <---------MYB52(1)   <---------LBD16 --------ARR14(2)       ------>ZmHOX2a(1)   <---------ALFIN1--------->ZAT14 -------GLK1(2)      <---------ATERF1(1)   <-----------------AGL1                      --------->ANAC46 --->RAV1(1)--------->ARR11(1)             <-----------------AGL2                    --------->ANAC46 >MYB46(3)----------->ARR10<-------GAMYB   ----------------->AGL1       --------->ANAC46     --------   gaatctccggcagagattcgagcctcctccgttgagaacaaggcttccacttctggagaaactatagtctcttgacgaaacctattcacacaaaatagag  3041400                                                                                        <----------DOF2                                                                                      <------ZmHOX2a(2)                                                                              ------->TEIL                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                    --------->ANAC58 <---------ARR11(3)      --------->MYB46(3)               --------->AHL20(2)           --------->ANAC58 --------->AGP1    <---------------AGL15              --------->YAB1     <-------TEIL     --------->ANAC46 ===================MADS_MADS         <---------ATHB12----------->ARR10  --------->ZAT6------>ZmHOX2a(2) --->GT1                        ----------->GT1---------->DOF2      ----------->GT1  --------->ARR11(3)   aaatttcaacaactagaaatcaagttgatttcgaaggtcaataatatactaaagcttagattcagagggcatgtaacacgaatttgagatctttggtgag  3041500                                     <---------ICU4                                   --------->GLK1(2)                                  --------->YAB1                               --------->YAB1                             --------->AHL20(1)                                      ---------->DOF2                             --------->AHL20(2)                            --------->ANAC58                       --------->ANAC58                                --------->ANAC58                       --------->ANAC46                     <----------DOF2--------->ANAC58       ---                       --------->ANAC58                    <---------DAG2---------->DOF2   ----------              --------->YAB1--------->YAB1              <-----------GT1--------->ANAC58--------->DAG2         --------->TOE2(3)>>>>>>>>>>GT-3b       ---------->DOF2<---------YAB1    <---------AtLEC2 <--   attgcagaaaacattagcataatccaagaaaaataataatctttgtttctcaaagtaatgaccttttgataaaacgaaagcatgcatgaaaggtagagcg  3041600                                  <------NtERF2                                  --------->ATERF1(1)                    <---------At4g35610             --------->LBD16     <---------ORA47(2)                     <---------DEAR3(1)            --------->HSFB2a(2)  <---------RAP2.3(1)                   <------NtERF2            <---------HSFB2a(2)  <---------DEAR4(2)                   <-----------HVH21           <---------LBD16       <---------ATERF1(1)                 --------->DEAR3(1)          --------->MYB52(1)     ------>NtERF2                      <------NtERF2          -------->P             <---------ERF1                     --------->DEAR3(2)        <----------DOF2         <---------RAP2.3(3)                 --------->RAP2.3(1)       <---------ANAC58         <---------RAP2.3(2)                 --------->ATERF1(1)        ------    <-------MYC3                <---------ANAC46                  <---------ARR14(2)           ------    ------->MYC4                <---------RAP2.6(2)               --------->ARR14(2)       --------->ANAC58    <-------MYC2                <---------DEAR3(1)               --------->ATERF1(1) --------->DAG2    ------->MYC2                --------->ATERF1(2)       <------ZmHOX2a(1) --------->ATHB12   ------    ------->MYC3               --------->ATERF1(1) --------->MYB52(1)--------->RAP2.3(2)   --------->ANAC58 ------>ARR14(2)               <---------ABI4(1)  ----------->HVH21------>NtERF2    ---------->DOF2 >DOF2 <---------ANAC58   --------->DAG2        --------->At4g35610<---------ATERF1(1)--------->DAG2 -------ARR14(2)         ---------->DOF2       ------------------------>ANAC81<---------WOX13(1)   --   aatacatgtgcttaccggaaaattagaaaaagaggcggcgagatggcaagagcagacggaggaagacggagccgtcgctgattgagaaaagggaagcaag  3041700                                                                   <----------DOF2                                 <---------YAB1                    <---------------AGL15                          ------>ZmHOX2a(1)                       =================================== --->ANAC46         --------->HSFB2a(1)                       <---------At4g35610  --------->ALFIN1 --->ANAC58         <---------HSFB2a(1)                    ---------->DOF2     ---------->DOF2 --->ANAC58      <------ZmHOX2a(1)                      <----------DOF2      <------ZmHOX2a(2) ------->At4g35610<---------ARR14(2)               ---------->DOF2<-----------------AGL3   caactggagagagacatgaggatagttcctcagggattatagctaaacatgttcaaagctttaaagctgctttaagtggatcaaagtggaagacgagtgc  3041800                                                                                    <---------MYB46(3)                                                                                    <------MYB83                        <---------------AGL15                                       <------MYB46(1)                        --------------->AGL15                                      <---------MYB46(3)                       <-----------------AGL3                                     <---------MYB55(1)                       ----------------->AGL3                                     <--------P                      ------>NtERF2                                               <---------MYB52(1)                   <---------RAP2.3(1)                                           <---------MYB52(1)                   ------>NtERF2                                             --------->SPL7                   <---------ATERF1(1)                                     <---------SPL7                  --------->ANAC46                                       --------------->AtSPL3               ----------->HVH21                                        --------->SPL7        <------ZmHOX2a(1)              <---------WOX13(1)                                       --------->MYB52(1)<---------HSFB2a(2)            --------->ATHB12                                           ------>MYB46(1)   --------->HSFB2a(2)           <---------YAB1               <----------DOF2                ------>MYB83<---------AtMYB61    <---------TOE2(3)*TSS   --------->YAB1   <---------At4g35610     <---------MYB59<---------DEAR3(2) =======================================MADS_MADS         --------->ARR14(2) --------->MYB52(1)------   aagtttaagttttctgattgacgcctccattaatggttccaactttcagataatcgtcgggttcttctaaaccgaaccgtaccggttggttctcgaggaa  3041900                                 <------MYB83                                 <------MYB46(1)                                <---------AtMYB61                                --------->MYB111(1)                                --------->MYB59                                --------->MYB46(2)                               <--------P                             <------MYB83                            <---------MYB46(3)                                       <------NtERF2                            --------->MYB111(1)                                      --------->RAP2.3(1)                            --------->MYB111(2)                                      --------->ATERF1(1)                            --------->MYB55(2)                                      <---------ORA47(2)                           <---------MYB55(1)                                       <---------ATERF1(1)                           --------->ALFIN1                                         <---------RAP2.3(1)                           <--------P                                              <---------RAP2.3(3)                           <---------ANAC46                                        <---------DEAR3(1)                         --------->ALFIN1                                      ------>NtERF2                        <---------DEAR3(1)                                    --------->DEAR3(1)                        --------->ALFIN1                  <---------DOF5.7(2)<----------CDC5                        <---------AtMYB61                <---------WRKY12    <------NtERF2                       <------NtERF2                    --------->DOF5.7(2) --------->LBD16       *TSS                       --------->ATERF1(1)             --------->TOE2(3)    ------>NtERF2  <---------YAB1                      --------->LBD16                  <-----------TGA1   --------->ATERF1(1) <------                     --------->ALFIN1                 --------->ANAC46  --------->PCF5  <------NtERF2                     <---------DEAR3(1)        --------->ARR11(3)       --------->PCF2 <-----------HVH21                     <---------ANAC46          <---------ARR11(3)      <-----------HVH21--------->TGA2(2)  <------------CBF  <---------LBD16     <----------DOF2--------->TOE1(3)<---------TCP20------>NtERF2< ---->DOF2  <---------TOE2(3)<------MYB46(1)  <---------GLK1(1)    ----------->RAV1(2) <-----------TGA1   agagaattgaatttgtggtttaggcgggggtgggtaggttgactttcgatatctcaacgtcaacgtctcttctggtcccgccgagtcggcgtcatcgttg  3042000                                                                                 <------NtERF2                                                                                ----------->GT1        <------ZmHOX2a(2)                                                       --------->LBD16       --------->ARR11(3)                                <----------DOF2       <---------ANAC46       <---------ARR11(3)                  ----------->GT1                    <---------LBD16    <---     ----------->ARR10                    <---------HSFB2a(2)              <-----------RAV1(2) ------ <------MYB46(1)                          --------->HSFB2a(2)       <---------ZAT2            <------ <------MYB83                    ------>ZmHOX2a(2)      <---------DAG2   <-----------HVH21    <------ ---MYB52(1)                   --------->ARR11(3)    <-----------GT1<---------At4g35610       <------ ---------MYB46(3)             <---------ARR11(3)  <-----------HVH21--------->At4g35610   <----------DOF2   agttggtgagatcatcttcttctcaacttcatcgatcttatcgtctcgaaaattgtcaccttttcttctcagctacttcaggcggagaaacactttccgt  3042100                                                 <------ZmHOX2a(2)                                                --------->ARR11(3)    <---------ZAT6                              <---------ARR11(3)  <---------ANAC46                       ===============HOX2a_HOX2a <-----------------------TaNAC69(2)      <------ZmHOX2a(1) ------MYB46(3)                      <---------ANAC46 --->LBD16                           <---------ANAC58   --------->ARR14(2) ---ANAC58      <------ZmHOX2a(2)    <---------ANAC58   <---------ARR14(2) ---ANAC46      ================================HOX2a_HOX2a        --------->ANAC46 ---ANAC58 <------ZmHOX2a(1)      <---------DEAR3(1)    --------->GLK1(2)   ggtttagtgttgaggacgatcactgtttgtaattcgatggcgaggaagaagatcagagaatatgactccaagagacttctcaaggagcatttgaagcgtc  3042200                             <-----------RAV1(2)                          --------->At4g35610                          <---------At4g35610                          <---------ZAT14                          --------->ZAT14                          --------->ZAT2                          <---------ZAT2                  --------->ARR14(1)                 --------->ARR11(1)                                             <---------GLK1(1)                 <---------ARR14(2)                                       <---------ANAC46                 --------->ARR14(2)                                     <----------DOF2                 <---------GLK1(2)        --------->ANAC58          ------>ZmHOX2a(2)               ----------->ARR10          --------->ANAC58        <---------ARR14(2)     <---------ICU4<-------TEIL    --------->KAN4(2)              --------->ARR14(2)   ttgctaatattgacctgcagattcgctctgctcaggtcattctcacgaattctagttttgttttcatcgatctgctttgtggaaattcgatagcacaatt  3042300  Previous    Next  AGI:  At1g09420.1    Description:  G6PD4 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 4); glucose-6-phosphate dehydrogenase. Identical to Glucose-6-phosphate 1-dehydrogenase 4, chloroplast precursor [Arabidopsis Thaliana] (GB:Q93ZW0;GB:O80525); similar to G6PD2 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2), glucose-6-phosphate dehydrogenase [Arabidopsis thaliana] (TAIR:AT5G13110.1); similar to hypothetical protein OsJ_010209 [Oryza sativa (japonica cultivar-group)] (GB:EAZ26726.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17378.1); similar to hypothetical protein OsI_011013 [Oryza sativa (indica cultivar-group)] (GB:EAY89780.1); contains InterPro domain Glucose-6-phosphate de Range:  from: 3038464    to: 3041821    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g09430.1    Description:  ACLA-3 (ATP-citrate lyase A-3). similar to ACLA-1 (ATP-citrate lyase A-1) [Arabidopsis thaliana] (TAIR:AT1G10670.2); similar to ACLA-2 (ATP-citrate lyase A-2) [Arabidopsis thaliana] (TAIR:AT1G60810.1); similar to ACLA-1 (ATP-citrate lyase A-1) [Arabidopsis thaliana] (TAIR:AT1G10670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66107.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17367.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64797.1); contains InterPro domain ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650); contains InterPro domain Succinyl-CoA synthetase-like (InterPro:IPR Range:  from: 3041998    to: 3045404    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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