Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                               --------->HSFC1(1)                         -----------                  --------->ARR11(3)           --------->HSFB2a(2)                        -----------                  <---------ARR14(2)           <---------HSFC1(1)     --------->ALFIN1 <---------ARR11(3)                  --------->ARR14(2)           <---------HSFB2a(2) --------->DAG2      --------->ARR11(3)                  <---------ARR11(3)    <---------At5g28300       ---------->DOF2     --------->CCA1(1)                ----------->ARR10      <-----------GT1         --------->LBD16        --------->RVE1(1)        ------->TEIL        ----------->GT1<---------SPL7 ----------->HVH21  --------->MYB52(2) -----   aaataagatgtatatgggcagatattagtatggttttttttttaccgttcgagaaaaaatgcgaccggaaaagtggcgatagtggcaaatatctgacgat  3029200                                                                                  <---------ALFIN1                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                       --------->RAP2.6(3)                            <---------RAP2.6(3)                       --------->DEAR3(2)                      <---------ANAC46  ------>MYB83    ----                <---------ANAC58                               <---------ANAC58  -------->P    ------                <---------ANAC58                           <---------ANAC58      ------>MYB46(1) ---- ---------->HVH21     --------->MYB52(1)              <-------TEIL<---------ARR14(2)           ------ >HVH21   --------->ATHB12                    --------->ANAC46 <---------ANAC58 ----------->RAV1(1) >TGA1 <------ZmHOX2a(1)        --------------------->WRI1 <---------ANAC58    --------->AtMYB61----- ----->DOF2--------->ALFIN1 --------->RAP2.6(2)    --------->ICU4 --------->ARR14(2) --------->AtMYB61   aagcgaccaggatgagtggcttcataccggcctccatagccatcttcgacgtaatgttcatgcctgcgtagccgatttgcaccaacaccatcgccaagaa  3029300      --------->ARR14(2)      <---------ARR14(2)     <---------CCA1(2) ----------->RAV1(1)                                                ------->TEIL ----->ANAC58                                                       <---------ARR14(2) --->ARR14(2)                          --------->AHL20(2)           --------->ARR14(2) ----->ANAC58                     <---------AHL20(2)               <---------CCA1(2) --->MYB52(1)       <---------CCA1(2)  <---------AHL20(2)      <---------ANAC46             <-------- ---->RAP2.6(3)<-----------GT1  <----------DOF2     <---------AHL20(2)       --------->ARR14(2)   cggcaacatatctgatttagccatctctcactctcttttattttattcttccaatttatgtgtttatgtgtatctccaaaatatgcctctctcactatta  3029400                  --------->ANAC58               --------->WRKY18(1)                                  <---------AHL20(2)         --------->YAB1                                            <---------AHL20(2)         -------->HAHB4                                       <<<<<<<<<<GT-1                <--------        <---------YAB1                               <---------ARR14(2)                     <--------     <---------ATHB12            --------->AHL20(2)  <---------GLK1(2)             <---------ARR11(1)     <---------ATHB51     --------->ANAC58           --------->ARR14(2)        --------->LBD16 <---------ATHB12 --------->ANAC58    --------->MYB52(1)      <---------ARR11(3)  <---------CCA1(2) -ICU4--------->YAB1      --------->ANAC58        --------->ALFIN1 --------->AHL20(2)       ---------   ctaatcaataataataggtcaagaaaccaagaaaaaaaaataagggagagaggtggattctctatatcatttattagtttccccaaatctatattttatt  3029500                                                                                    <-------TEIL                                                                                <-------TEIL                                                              <-------TEIL <---------AHL20(2)                                                    <-------TEIL           --------->AHL20(2)       --------------------->WRI1                  *TSS   ------->TEIL   <-----------TBP -AHL20(1)                    ------->TEIL   <---------AHL20(2)        --------->AHL20(2) -AHL20(2)                 ----------->GT1   --------->AHL20(2)    <---------AHL20(2)    <-----------TBP >AHL20(2)            ---------->DOF2  --------->ANAC46--------->AtLEC2<---------AHL20(2)--------->AHL20(2)   ttggttcgaccttatatttatagccaaagatgtatatatacacacatttatatatacatgcacatacatatatttatttatatacatacatatatataga  3029600                                                                                                   --                                                                                              -------                                                                                              <------                                               <---------AtLEC2                               -------                                               <---------ANAC58                     --------->ANAC58                  ----------->GT1--------->HSFC1(1)                                 --------->ANAC58                 --------->DAG2  <---------HSFB2a(2)  --------->ZAT6                <---------ANAC55(2)               ---------->DOF2   --------->HSFB2a(2)<-----------GT1                 --------->ANAC55(2)  <---------ARR11(3)     --------->MYB52(1)    <---------ANAC46                     --------->ANAC55(1)  --------->ARR11(3)  ----------->ARR10        <---------ANAC58    <----------DOF2  --------->ANAC46   gagagatgttttaaacagaaaggtgagaaacggttcgagaatgaagtttgcttgtaacacttggactctctttagggcataagaacacgaaacaataggt  3029700                               <---------AHL20(2)            <-----------------AGL3      <--------HAHB4           --------->AHL20(2)      --------->ATHB12     <---------AHL20(2)     <---------ATHB12      --------->AHL20(2)    ------->TEIL          --------->AHL20(2)                                             --------->GLK1(2) <---------YAB1           --------->AHL20(1)                                             <---------ARR11(3) ------->CCA1(2)          <---------AHL20(2)                                          --------->AHL20(2) -->ANAC55(2)             <---------AHL20(1)   <---------YAB1           <---------ANAC58 --------->ARR11(3) ---ANAC55(2)<---------------AGL15     <-----------GT1                  <---------ANAC58 <-----------ARR10 ---->GT1   <-----------------AG     <-----------GT1                    <---------ANAC46--------->RVE1(1)   gatatgaatcatttgatatttttggcaatttatttaaattttctccttgctgattactaatacaatccaaattggcgttttgtcaaaaaaaaatctaact  3029800                                                           <---------YAB1                                                       <---------ANAC58                                                  --------->ALFIN1                                                <------MYB46(1)                                                <------MYB83                          <---------ATHB12                                                <---------ANAC46--------->ARR11(3)   --------->ANAC58                                               <---------AtMYB61<---------ARR11(3)   --------->ANAC58                                               --------->MYB55(2)                --------->ANAC58                                               --------->MYB46(2)                --------->ANAC58                                 <---------MYB52(1)    <---------ANAC58          --------->ANAC46             <-----------GT1   <---------ANAC58--------->MYB111(2)        --------->ANAC58     ------>ZmHOX2a(1)         <---------ANAC58<---------MYB46(3)         --------->ANAC58      <---- <-----------GT1    <---------AHL20(2)         --------->MYB111(1) <----------DOF2  --------->WOX13(1)   tattttcctcgttttaatccatttttttggtttccgttttttcatgggtttggtggagcttgtgaatgtctttctcaagcttcaagcaatcaatttgcct  3029900                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                              <---------ANAC46                                                                              <---------ANAC55(2)                                             <---------ANAC58                 <---------ANAC55(1)                                             <---------ANAC58                 --------->ANAC55(2)                                    <------MYB83                             <---------TOE1(2)                                    <------MYB46(1)  <---------TOE2(3)  --------->ARR11(3)                                 <---------ANAC58   <-----------GT1     <---------ARR11(3)          -                                 <---------ANAC58 <---------WOX13(1)<---------ZAT6               ---- ------DOF2                 --------->MYB52(1)  --------->ATHB12   <---------YAB1------->TEIL   <----   ttgctaaaactcgtttctgtgatattaaaccaagggcttggtttatcgcttgattaacaatatcgaattagtattatcttacgtattttgaattgatttt  3030000                                                       --------->At5g28300                                                      ----------->GT1                 <------MYB46(1)                                                 <---------YAB1                       <------MYB83                                               <---------------AGL15      ----------------->AG                                         <---------AHL20(1)            <---------CCA1(2)              <---------DAG2   <---------ANAC46=============================================MADS_MADS              <----------DOF2  <---------ANAC58--------->YAB1        <---------AHL20(2) -------->AHL20(2)        <----------DOF2--------->AHL20(1)   <-----------GT1 ---------->DOF2 ----->YAB1  <---------ANAC58  <---------ANAC58--------------->AGL15 --------->AHL20(2)    --------->ALFIN1 -----YAB1   <---------ANAC58<---------ANAC46 <---------YAB1 --------->AHL20(2)     <--------P  <----   cattatatcactcttgctttttgtcaaacttttgtgtgtgtaatatatatcataaatggtaaattaactatttatatcccaaaagggttggaagttgggc  3030100  Previous    Next  AGI:  At1g09380.1    Description:  integral membrane family protein / nodulin MtN21-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G07050.1); similar to nodulin-like protein [Gossypium hirsutum] (GB:AAO60108.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 3026137    to: 3029551    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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