Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <---------DAG2                                                                               --------->TOE1(3)                                                                               --------->TOE2(3)                                                                            <-----------GT1         <---------AHL20(2)                                      <---------ALFIN1 ---------->GT1               --------->AHL20(2)              --------->LBD16------->TEIL -ZmHOX2a(1)                  <---------AHL20(2) <------ZmHOX2a(1)       --------------->AtSPL8    <- --TOE2(3)        <----------DOF2  <-----------GT1  <----------DOF2     <----------DOF2          ----   atttgttatatgaaattgtgctttactgttttttaatttactgaattaagaggactttttaatccccaaaccctctttgtaccttatatgtttgctatgg  3021400                                                    --------------->AGL15                                                    <---------------AGL15                                                    ------>ZmHOX2a(1)                                           --------->ATHB51                  <---------------AGL15                                           <---------AHL20(2)                --------------->AGL15                          --------->AHL20(2)       <-----------------AGL3    ------>ZmHOX2a(1)        ------>ZmHOX2a(1)<---------AHL20(1)--------->AHL20(2)               <-----------------AGL3       --------->TOE2(3) --------->AHL20(1)<---------ICU4         <---------AHL20(2)         <------- ---------DOF2          --------->AHL20(2)--------->ICU4          --------->AHL20(2)        <-------- --->TEIL          --------->YAB1   ----------->GT1==========================================MADS_MADS   actttccttcctaaaatacaatgaaaatatatatagttttgttaattatttctcctatatatagttttttaattttctcctatatatagtttttttaatc  3021500                                                         --------->AHL20(1)                                                         <---------AHL20(1)                                                         <---------AHL20(2)                                                        --------->AHL20(2)                                                        --------->YAB1                            <---------AHL20(2)          <---------AHL20(2)                           --------->AHL20(2)       --------->AHL20(2)                ----------->GT1              <---------AHL20(2) <-----------GT1 <----------DOF2                   ----------->GT1       <---------AHL20(2)  <---------AHL20(2)    --------->TOE2(3)          --------->YAB1 ----GT1     --------->AHL20(2)  <---------YAB1  --------->TOE1(3)   <---------AHL20(2)  <---------AHL20(2) -AHL20(2)   <---------AHL20(2) <---------AHL20(1) --------->AHL20(2)--------->AHL20(2)  --------->AHL20(2)   ttcttctatttttttttaaattctttgaatttaatatacttgacttagaaactttaaattatattcaatatttatttatcaaaaaatgtgataaatttgt  3021600                                                  <---------------AGL15                                                  --------------->AGL15                                                 <-----------------AGL1                                                 <-----------------AGL2                                                 ----------------->AGL2                                                 <-----------------AG                                                 ----------------->AGL3                                                 <-----------------AGL3 ---------->DOF2                     <---------ARR11(3) <------------CBF             <-----------GT1               --                     --------->ARR11(3)--------->ATHB51       ----------->GT1                      --                   ----------->ARR10   --------->ATHB12       --------->ANAC55(2)             <------                 <--------P           <---------YAB1          --------->ANAC58                -------            <------------CBF         --------->TOE2(3)        <---------ANAC55(2)            --------         ------------>CBF           --------->REM1(1)         --------->ANAC58             <--------P       <-----------------AG       ------>ZmHOX2a(1)           --------->ANAC55(1)--------->YAB1  ----       ===========================================================MADS_MADS  ---------->DOF2 --------   atttctatttatgcaattggtaagttcttcattttcctacattattgactcactaattttggaaacgtaattaacaaagtaaagcataaatgggtaagct  3021700                                         ------------>CBF                                        --------->ANAC58                                        --------->ANAC58                                        --------->ANAC46 <---------ALFIN1                      ------->GAMYB                                ------>NtERF2 ------->AtMYB61                      <---------ALFIN1                              <---------ZAT18 --------->RAV1(1)                  ----------->RAV1(1)                            --------->ANAC46 ---At4g35610                    --------->AtLEC2                                <---------ANAC58 -->At4g35610                    --------->ANAC46                                <---------ANAC58 ->ANAC58                   <-----------ARR10                                ------->TEIL ---->P     <-----------GT1 --------->GLK1(2)                             <---------YAB1<---------MYB52(1) ->ANAC58<---------AHL20(2)<---------GLK1(2)        --------->HSFB2a(2)--------->ICU4<------NtERF2 --   accacacatattttatacatgttattcaagaatctatgcaacacacaatctcttctaaaatttagaatacaaaattatgaatttcgcgcccttcgttttt  3021800                                                                         --------->ICU4                                                                    --------->ANAC58                                                                    --------->ANAC58     ------>ZmHOX2a(2)                                           ------->GAMYB     ==================================HOX2a_HOX2a             ------>MYB83   <---------ARR11(3)                                          ------>MYB46(1)           <---------AtLEC2 <---------YAB1           <-----------GT1                     --------->MYB52(1)    --------->ARR14(2) --------->ICU4       <---------AHL20(2)   <------ZmHOX2a(1)  ----------->RAV1(1)   <---------ARR14(2) ------->YAB1   <----------DOF2 ------>ZmHOX2a(1)            --------->AtMYB61   --------->YAB1   ctcatgatcgttcttgttctttatatttttactcctcacattgaaggagtcgaagccgatggaccaacagaagcactgatcaatagtatttgcatagaaa  3021900                                                                        --------->TGA1a                                                                        <---------TGA1a                                                              ---------->DOF2     --------->AHL20(2)                                                            <---------YAB1     --------->YAB1                                                   --------->MYB46(3)   --------->O2                    <---------AHL20(2)            ------>MYB46(1) --------->ARR11(3)                    --------->AHL20(2)            ------>MYB83====================bZIP_DOF       <---------TOE2(3)                         --------->MYB52(1)     <---------O2    --------->ANAC46   --------->ARR11(3)          --------->AtLEC2 --------->AtMYB61 <---------ARR11(3)  <-----------GT1   acgaagattatggattttgcaataaaatcatccatgaaaaattgaagacaccaacggctactatcaaagaactcacgagtctcataatatacaccactat  3022000                                                 ----------->RAV1(2)                                                 <---------ANAC46             <---------ICU4                      <---------ANAC58          --------->YAB1                         <---------bZIP60(2)   --------->O2                          --------->LBD16   --------->TGA1a                      --------->ANAC46   --------->ANAC58                     --------->ANAC58   <---------TGA1a                      --------->ANAC58   --------->ANAC46                    <---------LBD16                                    -----------   --------->ANAC58             ----------->ARR10<---------ANAC58    <---------AtMYB61 --------->AtLEC2 <---------ALFIN1      <---------YAB1 ------>ZmHOX2a(1)      <------ZmHOX2a(1)     <-----------HVH21   ggctcacgccagtgatacttacattttcatcgataacatcctccgcaaatggcctggccctaaggagacgagtggtctcaagacttgtcatgcagtttat  3022100                                                                                            ------>ZmHOX2a(2)                                                                                           <------ZmHOX2a(2)                                                                                          --------->ARR14(2)                                                                                          --------->AGP1                                                                                          --------->ARR14(3)                                                                                          <---------AGP1                                                                                          <---------ARR14(3)                                                        ------->TEIL--------->ANAC58      --------->ARR11(3)                                                     --------->ANAC58                     <---------ARR11(3)                                                     --------->ANAC58                     <---------ARR14(2)                                                <---------------AtSPL3         --------->ZAT18                 <---------ANAC46         ---------->DOF2           --------->ANAC58    ----------->ARR10 >GT1      <---------ATHB12   <----------DOF2   <---------------AtSPL8         --------->ETT(2)   aagagagagaccaatagtttcttagaaattcgctttctattttcaaaaggagagtacgaacttatggatgaagccattttgtccacagccaagatcttag  3022200    --------->ALFIN1                                                <---------ARR14(2)        <------   <---------ZAT14                          <---------ANAC58        --------->GLK1(2)         -------   --------->ZAT14          ------>ZmHOX2a(1)                   --------->YAB1        <---------At4g35610   --------->REM1(2)     ------>ZmHOX2a(1)  <---------ANAC58   <---------YAB1         --------->At4g35610  --------->ALFIN1<---------YAB1 --------->ANAC46            --------->CCA1(2)    --------->ARR14(2)   aagagtgtaggggcgattttcttattcctccttacaaggagcctctgcttgagaagaagagagttatgagaatattgatcaccatgtctgctgtttctgg  3022300  Previous    Next  AGI:  At1g09350.1    Description:  ATGOLS3 (ARABIDOPSIS THALIANA GALACTINOL SYNTHASE 3); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. similar to ATGOLS2 (ARABIDOPSIS THALIANA GALACTINOL SYNTHASE 2), transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT1G56600.1); similar to galactinol synthase-like protein [Thellungiella halophila] (GB:AAM19710.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) Range:  from: 3019821    to: 3021443    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g09360.1    Description:  invertase/pectin methylesterase inhibitor family protein. similar to enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] (TAIR:AT1G09370.1); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 3021804    to: 3022370    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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