Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------YAB1  <----------DOF2 ------->ID1                                                                           --------->ANAC58 --------GT1                       <-----------GT1                                     --------->ANAC46 ---DOF2      ----------->GT1 ----------->GT1                                          --------->ANAC58 --DAG2--------->YAB1  --------->YAB1 --------->TOE2(3)                        <---------GLK1(2) <---   ctccctttctgataacaagtgaaaatcagaaatagtttaacttcaatccctcaattcgactctcgtttagtccaatacacagattccacaagtcataaac  3003400                                  --------->O2                                                      <                  --------->HSFB2a(2)                                                               =                  <---------HSFB2a(2)       --------->ANAC58                    ---------->DOF2    <-                  <---------HSFC1(1)        --------->ANAC58             <---------YAB1            --          <---------TOE2(3)   --------->ARR11(3)                       <------ZmHOX2a(1)    ---------        ---------->DOF2       <-----------HVH21                        ============================== ------LBD16  --------->GLK1(1)   <---------O2                     ---------->DOF2       ----------->GT1   tcggagacaataaaggaattcgagaaattgaaggtcatgtcgcaaaacgaaattaacacatagaaactaaaaaggatgatacaaaagagtattgtaaaga  3003500                               --------->LBD16                              <---------ANAC55(2)                           --------->ARR14(2)                           --------->GLK1(2)                           <---------ARR14(2)                          <---------GLK1(1)                     <---------ANAC46                --------->At4g35610                <---------At4g35610              <-----------RAV1(2)              <---------ANAC46--------->ANAC46         <---------REM1(1)--------->GLK1(1)         <-----------RAV1(1)  --------->ANAC55(2)         =================RAV<---------LBD16                                                       <- ------ZmHOX2a(2)    <---------O2                                                                  <- ===============================HOX2a_HOX2a     <---------At4g35610                                <- --------ARR11(3)    <---------bZIP60(2)    <---------REM1(1)                              --------->YAB1 ------->ARR11(3) ----------->TGA1       --------->ICU4                                   <---------YAB1 ->DOF2 <---------TOE2(3)<------ZmHOX2a(1)--------->YAB1                              <---------ANAC58 ======HOX2a_HOX2a----------->HVH21 --------->YAB1              <----------DOF2       <---------ANAC58   agatcatactgatgttgcaggtgacgaggaatccggaatgagaatgatgaagcagagaagagggagctttgtagtcgaatcgagggatgcttatgatgct  3003600                                         <----------DOF2 --------->ALFIN1                      ------>ZmHOX2a(1) <---------ZAT6                   ------>ZmHOX2a(1) <-----------RAV1(1)        <---------ZAT2 --------ANAC46             --------->At4g35610 --------ANAC58             --------->ZAT2               --------->ANAC46 --------ANAC58             <---------At4g35610<----------DOF2        ------>ZmHOX2a(1)   ggagtgttgctcccatggagtcaatgtttcagcttcctctcctctttctcttttttcacacacagtctcttcctctattgttcttccaacatcgtctact  3003700                <---------MYB52(1)              <---------ICU4                            --------->MYB59          --------->MYB46(3)                        <---------ZAT6                     <------------CBF        --------->RAP2.6(2)                   --------->ANAC46                       --------->ARR11(3)      --------->At4g35610                     --------->ANAC58                   ---------->DOF2      <---------At4g35610                     --------->ANAC58  *TSS         ---------->DOF2      --------->ZAT2                        ---------->DOF2     ------------------------>ANAC81     <   tcttctacagcagccatcgttactctctctacctctctgtctctctcaaagccagagttaggccaaaaaaaaaaaaaaaaaaagaaagacattgagcctt  3003800                            <---------ANAC58                            <---------ANAC58                     --------->ZAT14                     --------->ZAT18               <---------ANAC46                     <---------ZAT18            ----------->HVH21                             -------                    --------->ALFIN1          --------->ANAC58               --------->At4g35610                 --------->DAG2               --------->ANAC58--------->ANAC58            --------->At4g35610           --------->GLK1(2)<---------ANAC46  --------->ANAC46--------->ANAC46            <---------At4g35610 ---------YAB1  ---------->DOF2          --------->LBD16      --------->ANAC58      ----------->RAV1(2)   atatgattcagcgattcggaaagtgcggtagcgttttaaaaccctgaaacgcgacgtttagagaacgcaacttcaaaacagctaaaccctgaagcttacc  3003900                                                                                                  ---                                                                                              -------                                                                                              -------                                                                                              -------                                                                                             <-------                                                                                            <--------                                                                                            <--------                                                                                 <-------TEIL--------                                          <------ZmHOX2a(2)                ----------->ARR10<--------                        --------->TOE1(2)--------->ARR14(2)          <---------ANAC46   <---------ANAC58                        --------->TOE2(2)<---------ARR14(2)       ----------->HVH21     <---------ANAC58                     *TSS  <---------TOE2(1)                 --------->GLK1(2)--------->CCA1(2)  <--- ->P       ------------>CBF<---------TOE1(1) ------>ZmHOX2a(1)   <-----------HVH21      <---------ANAC46   agaccagagacagaccaatagaacatcatacgaggtccaattcgatcctctcaagagtctgcgagtctgtgagggggaagagatgcagtttcttgcgcgg  3004000 ------>GLK1(2) -->ANAC46 -->ANAC58 -->ANAC58 --LBD16 -ANAC58                  --------->ANAC55(2) -ANAC58                <-----------RAV1(2)                        ------>ZmHOX2a(1)     <---------YAB1 ->LBD16         <---------HSFB2a(2)                              <---------ALFIN1     <-----------GT1 -ANAC46      <---------ARR14(2)                                ------>NtERF2       <---------ICU4 ------ARR14(2)  --------->HSFB2a(2)                        <-----------GT1    <---------KAN4(2)   aatctagttcggagagtatcgagaactcaggtaatgctcccaattcatgttttcttcgtaatttgcctcctccttgttgggattgttcattaccatactc  3004100                                                                       --------------->AtSPL8                                                                    ------>ZmHOX2a(2)                                                                   <------ZmHOX2a(2)                                 <---------ARR11(3)               --------->ARR14(2)                                 --------->ARR11(3)               <---------ARR14(2)                         <------ZmHOX2a(1)                        <---------AGP1                 <---------AHL20(2)                               --------->AGP1                <---------AHL20(1)                                <---------ARR11(3)                <---------ARR11(3)            <---------ANAC58    --------->ARR11(3)       <---------                --------->ARR11(3)<------ZmHOX2a(2)              <---------CCA1(2)    <-------TEIL           ----------->GT1   ---------->DOF2  <---------ANAC58  ----------->ARR10--------->DAG2   --------->LBD16       ================HOX2a_HOX2a        <-------TEIL        ---------->DOF2   ------>ZmHOX2a(1)   <---------TOE2(3)<---------AHL20(2)  --------->ZAT18  --------->TOE2(3)<------   tgttcctgaagacttgtatatatttgaggattaaagatcgaattttttgggttccctccaagtgcatagatcttctgtaccataaagtttcatcttttga  3004200                ---------->DOF2                                                           <---------At4g35610             <---------HSFB2a(2)                                            <---------ANAC58             --------->HSFB2a(2)                                            <---------ANAC58 -DOF2<-----------GT1                         <---------ANAC46            --------->ARR11(3) ---YAB1 <----------DOF2                     <---------LBD16 --------->DEAR3(1)           --------->At4g35610   atgggaattgactttctataaagtttgcagaaattttgagacttgatttcggagactacttcacctccgatgctaataacttgtgtttcatcaactgata  3004300  Previous    Next  AGI:  At1g09290.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO42450.1) Range:  from: 3001519    to: 3003764    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g09300.1    Description:  metallopeptidase M24 family protein. similar to X-Pro dipeptidase [Arabidopsis thaliana] (TAIR:AT4G29490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17407.1); contains InterPro domain Peptidase M24, catalytic core; (InterPro:IPR000994); contains InterPro domain Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; (InterPro:IPR007865); contains InterPro domain Peptidase M24, methionine aminopeptidase; (InterPro:IPR001714) Range:  from: 3003921    to: 3008215    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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