Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            ------>MYB83                                                                          ------>MYB46(1)                                                                         --------->MYB52(1)                                                                         ----------->RAV1(1)                                                                        ------->GAMYB                                                                        --------->AtMYB61                                                                       --------->MYB46(3)                                                                       <---------MYB55(2)                                                                       <---------MYB52(2)                                                               <---------ATHB12                                                             --------->WOX13(1)--------->ZAT14                                                   <----------DOF2    --------->ANAC58                                     <---------------AGL15 ------>ZmHOX2a(1)   <---------ZAT14          <---------YAB1            <-----------------AGL3--------->TOE2(3) ------->GAMYB <---------AHL20(2)            ----------->GT1     --------->TOE2(3)  --------->ANAC46            <-- ------->TOE2(3)           --------->SPL7       <---------ARR11(3)    --------->ANAC58       -------- ---------DOF2          --------->YAB1          --------->ARR11(3)  --------->MYB46(3)   ---------->DOF2   tctttaatggttaagatggattacactcgtaagtcgtaactatacatggagaactttaatcctcaatcaaacaaccaacagaacacagttcaaaagggtt  3000900                                       <---------HSFB2a(1)                             --------->MYB52(1)                                       --------->HSFB2a(1)                          --------->ANAC58                                       <---------HSFC1(2)                     ----------->RAV1(1)                            --------->DAG2                         --------->YAB1--------->DEAR3(1)      <----------DOF2      ---------->DOF2            <----------DOF2        --------->MYB46(3)   <-----------GT1    <---------ALFIN1 --------->HSFC1(2)         <---------ATHB12  --------->ANAC58 -------TOE2(3)       ----------->RAV1(1)<-----------GT1 --------->YAB1     --------->SPL7   -------- --->GT1      --------->ZAT14  ----------->GT1 <-------TEIL     --------->WOX13(1)  --------->ANAC46   aagtttttcttttcagttctctcaccacataaagggttagaattttcgattcatggctttaatactcaatcagacgcgaaccacagacgaaacagagaac  3001000                  --------->YAB1                                                   ----------->ARR10              --------->AHL20(2)        ---------->DOF2                   <----------DOF2----------->HVH21       <-----------HVH21       --------->ARR14(2)                        ----------------->AGL1    <-      ----------->GT1    --------->ATHB12                               ------>NtERF2  ----------->RAV1(2) ->ZAT14 <---------WRKY38(1)   <---------ARR14(2)           ----------->GT1<----------DOF2      -----   tcagaaaatggtcaaatcaaatataaaacattggatatgtagaaaaggagattagaagcatacagtaacattgacgcctttaggggagagcctgactcgg  3001100                    <---------ZAT2                                                      --------->ANAC46                    <---------At4g35610                                        --------->ZAT14         ------>MYB46(1)                                            <---------ZAT18    ------->GAMYB       <---------MYB59                                    <------ZmHOX2a(1)    <---------ZAT14 --------->REM1(2)  --------->At4g35610               <------ZmHOX2a(2)    <---------------AtSPL3 -----NtERF2        --------->ZAT2                   <---------AGP1 --------->ZAT18   <---------ALFIN1 ->NtERF2------>MYB83      <-------TEIL           --------->HSFB2a(2) ------->TEIL  ----------->RAV1(1)   ccgagtagacctaatgagttgcagctagattcatagaaggaaacgagctcatctagatcaggaacagaggtgtacttgtagtacagcaacacaccgtatt  3001200                                                                                                   --                                                                                                   <-                                                                                                  <--                                                <---------------AGL15                            <---                                                --------------->AGL15                           <----                                               <-----------------AGL1                          <-----                                        --------->ZAT2                                         ------                                 ----------->RAV1(1)              <----------DOF2              <-----                                 <---------ALFIN1        <---------GLK1(1)                     <-----                              ------>ZmHOX2a(2)<-----------------AGL2                          <-----                    <----------DOF2<---------ALFIN1   <---------TOE2(3)             <-----------RAV1(2)                  <---------At4g35610   <---------ZAT2<---------TOE1(3)         --------->GLK1(2)----   gctcttcatcttcaattctctgcttctcgtgatcgccacacgagctcgttcccattagggtttctcttctttccactgggataatctcaggctcttggcg  3001300                                                                                   <---------ANAC58                                                                              <---------HSFC1(2)                                                                              --------->HSFC1(2)                                                                              --------->HSFB2a(1) ------->HSFB2a(2)                                                           ------->TEIL --------HSFB2a(2)                                              --------->ALFIN1   <---------ANAC58 -------ANAC46                                               <---------AtMYB61<---------HSFB2a(1) ---NtERF2                                              ------->TEIL   ------>MYB46(1) -------HVH21                                           --------->MYB52(1)  ------>MYB83 ----DEAR3(1)                <-----------HVH21       --------->ANAC55(2)    ------>MYB46(1) --->bZIP60(1)         <---------ALFIN1              <---------ANAC55(2)  <---------MYB59 ----ANAC46      --------->ANAC58                    --------->ANAC46  ------>MYB83<---------ANAC46 ----ANAC58      --------->ANAC58                    --------->ANAC58--------->AtMYB61     ---------- ----ANAC58    <------ZmHOX2a(1)                     --------->TOE1(1) --------->MYB52(1) --------->DREB2C(2) ----->ATERF1(1) *TSS----------->RAV1(1)             --------->ANAC58<---------MYB59     --------->DEAR3(2)   tcgcgaagatggaaccaggaagccaacactgtttcagagcgcgatttggaaaaccacgtaccagaggtggaccaaaccgaaccttgcttaaaccgacatt  3001400                      --------->AHL20(2)                      <---------AHL20(2)                     --------->AHL20(2)                 <---------AHL20(2)             <------MYB46(1)             <------MYB83             ----------->GT1                  --------->GLK1(1)         --------->ATHB12                     <---------GLK1(1)               ----------->GT1   ----------->TBP   <---------AHL20(2)     --------->ATHB12   <---------ANAC58 ->RAV1(1)<------------CBF                <---------WOX13(1)   <---------ANAC58                  <---   tgtttataaatcgattggtttaatttaaaaaccgaattgaaccgattgatttccaagttgccatagcttagccttacaaactgtaacattgtgaacatag  3001500                                                                                               <-----                                                                                       ---------->DOF2        --------->ALFIN1                                                           --------->ANAC58  --------->DAG2                                                                   --------->ANAC58 ---------->DOF2            ---------->ID1    <-----------HVH21                  ---------->DOF2 >>>> -------ID1           <---------YAB1      --------->TOE2(2)                --------->ARR11(3) <------   ggaaaaagcggtggagatgggtttatctttgttctcttgaataacataggtcagacattgttgttaactccattagagatactgaaagcaaaagacatat  3001600                                                                                             <-------                                                                                             <-------                                                                                         ---------->ID1                                                                                       <------MYB46(1)                                                                                      --------->MYB59                                            --------->HSFB2a(2)               ----------->HVH21                                            <---------HSFB2a(2)             <---------At4g35610                                    <----------DOF2                         ----------->RAV1(2)                                 <---------ARR11(3)                         --------->At4g35610 ------ARR10                     --------->ARR11(3)                        ------->TEIL<------MYB83 >>>>>RAP2.2                    <---------CCA1(2)               <------ZmHOX2a(2)   <---------MYB52(1) ---CCA1(2)                     <---------GLK1(1)           <---------At4g35610<-----------HVH21   ctaaacaaaaacagagagattacaacttctattgatatctttggctctcgaaaatcgaatgcagcgatcagcctttgcacctgtcagtttggtccctttt  3001700                                                                                --------->ZAT2 ------                                                                                <---------At4g35610                                                                                --------->At4g35610                                                 --------->MYB52(1)          <---------At4g35610                                     <---------RAP2.6(2)                     --------->At4g35610   <- ---DOF2              <---------ANAC58        <---------At4g35610--------->ANAC58            <------- --DAG2               <---------ANAC58   <----------DOF2         --------->ANAC58    ---------->DOF2   tgtgtttggattcagggactagaggcttgatgcagagtttcggctttgtgctaacgagtctatgtggaagcactgaaacagcagctacaaaggagccact  3001800  Previous    Next  AGI:  At1g09280.1    Description:  similar to rhodanese-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G40760.1); similar to Os12g0563400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067036.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64715.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17408.1); contains InterPro domain Protein of unknown function DUF341 (InterPro:IPR005645); contains InterPro domain Rhodanese-like (InterPro:IPR001763) Range:  from: 2998102    to: 3001317    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g09290.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO42450.1) Range:  from: 3001519    to: 3003764    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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