Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------YAB1                                       <---------AHL20(2)                                      <---------AHL20(2)                              --------->MYB59       <---------AHL20(1)                              <---------TOE2(3)     --------->AHL20(2)       --------->ANAC46                       --------------->AGL15        <---------AHL20(2)       --------->ANAC58                       <----------DOF2--------->AHL20(2) <---------AHL20(2)  --------->ANAC58                  <<<<<<<<<TBF1----------->GT1 --------->AHL20(2)     <---------ICU4             ----              ---------->ID1  <---------TOE1(3)<---------AHL20(2)    --------->AHL20(2)----------->HVH21   aatacaaaacctatttgttcttcttctttttttaggttaattttatgattttattttattttatctaggtattaattccaagtaaacttgtgacagtttg  2994000                                                                               --------->ATHB12                                                                            <---------ICU4                                                                            -------->HAHB4                                                                            --------->YAB1                                                                           --------->ICU4                                                                         --------->YAB1                                                                         --------->ATHB51                                                                         -------->HAHB4                                                                         <---------ICU4                                                                         <--------HAHB4                                                                        --------->AHL20(2)                                                                        --------->ICU4                                    --------->AHL20(2)                  <---------YAB1                                    <---------AHL20(2)                  <---------ATHB51                                   --------->AHL20(1)                 --------->YAB1                        <----------DOF2 <---------AHL20(2)       ------>NtERF2<---------YAB1                        <---------DAG2  --------->AHL20(2)    --------->At4g35610                 <--           <---------CCA1(1)       <---------AHL20(1)         <---------At4g35610               <----           <---------RVE1(1)       --------->AHL20(2) <---------At5g28300<--------ATHB1     --------- ------>DOF2     <-----------GT1   <---------AHL20(2)<-----------GT1 --------->ICU4        ----------   aaagtgctaatggatatttttacaaactttttttgaatttatttaaatgcaaaatttacagttttgctgccataataattatgatttgataagaaaagtt  2994100                                            <---------AHL20(2)                                            --------->AHL20(2)                                        <---------YAB1                                       --------->AHL20(1)                                       <---------AHL20(2)                                       <---------AHL20(1)                                      --------->AHL20(2)         <---------ICU4                 <----------DOF2<---------ANAC58                <---------YAB1--------->YAB1    <---------HSFB2a(2)         <---------ANAC55(2)            --------->ARR11(3)      <-----------RAV1(1)    --------->HSFB2a(2)         --------->ANAC55(2)            <---------ARR11(3)--------->AHL20(2) --------->GLK1(2)    <-------GAMYB  <---------YAB1  <---------AHL20(2)      <---------YAB1 -------YAB1     <---------DAG2 <---------ANAC46     --------->AHL20(2)    --------->YAB1        ---- -------GT1     <---------ANAC58<---------ANAC58<---------AHL20(1)        <---------AHL20(2)--------- >DAG2          <---------ANAC58----------->GT1 --------->AHL20(2)    <---------ANAC55(2)   <-------- >DOF2    <---------ZAT6      --------->MYB52(1)<---------AHL20(2)  --------->AHL20(2)--------->ARR11(3)   acgattctagtagagtttgcttttcgttggaataacgtgattatatttattttattttaatacaagataattacatataatgatataatatgttgcgaaa  2994200                                                       --------->LBD16                                                   <---------ARR14(2)                                                   --------->GLK1(2)                                       <---------HSFB2a(1)    <---------YAB1                             ---------->DOF2       --------->ARR14(2)                         <-------TEIL  <---------HSFC1(2)     --------->ICU4                       --                        --------->ARR14(1)   ----------->RAV1(1)                               <-----                       --------->ARR14(2)  ------>ZmHOX2a(2)-------->ATHB1                     <-----                       <---------ARR14(2) <------ZmHOX2a(2) <---------ICU4                    <------NtERF2                       <---------GLK1(2)<------ZmHOX2a(1)   --------->YAB1                   ------>NtERF2                     ----------->ARR10 --------->HSFB2a(1) <---------ATHB51                 --------- ------>DOF2    <----------ARF1        --------->HSFC1(2)  --------->ICU4                  --------->ATERF1(1) -->GT1<---------GLK1(2)--------->CCA1(2)--------->ARR14(2)--------->AHL20(2)             ------>NtERF2 -ANAC46<---------YAB1 --------->ARR11(1)<---------ARR14(2)<---------AHL20(2)            --------->ANAC46   aaagtctctgattcttgggagaaaagattcgaaaagaaggaaggatccaacaaaatccgaaattattattaactgaaaaaacaaaaattttgcgccagcg  2994300                                       --------->AHL20(2)                                       --------->YAB1                                  --------->MYB46(3)                                 --------->ANAC58                                ------->GAMYB                               <---------MYB55(2)                               --------->MYB46(3)                               <---------MYB111(2)                           ------>ZmHOX2a(2)                         --------->ARR14(2)                         <---------ARR14(2)                            *TSS                        <------ZmHOX2a(1)                              --------->At4g35610                       --------->HSFB2a(1)                            ----------->RAV1(1)                       --------->HSFC1(2)                      --------->ANAC46                       <---------HSFB2a(1)              ------>ZmHOX2a(2)                       <---------HSFC1(2)               =====================================HOX2a_HOX2a                    <------ZmHOX2a(1) <---------ATHB12 <------ZmHOX2a(2)                    ==============HOX2a_HOX2a         <---------ARR14(2)                    =============HOX2a_HOX2a   ------>NtERF2------->TEIL--------->MYB46(3)                 =================HOX2a_HOX2a --------->DEAR3(1)   --------->ANAC58          <------ZmHOX2a(2)                 ================HOX2a_HOX2a  <---------ETT(1) --------->ANAC58             <-------- ---------->CBF  <------ZmHOX2a(1)------------>CBF    --------->ARR14(2)<-----------RAV1(2) --------- ----ANAC58    >>>>>>>GRF7<------ZmHOX2a(2)   ----------->HVH21--------->ANAC58           --------->ANAC46 ----ANAC58   <-----------RAV1(2)--------->ANAC58   --------->LBD16--------->ANAC58   ------>ZmHOX2a(1) >DEAR3(1)  <-----------HVH21  <---------MYB111(1)<---------LBD16---------->DOF2      ==============HOX2a_HOX2a   tggcaatacttctctgtcaggaggaaggatccaacaaccaataaaactccgacccggatccgaacccgaaagcaccagacgactcgtcctccacgatccc  2994400                                                            <---------ANAC58                                                          <---------MYB46(3)                                                <-----------RAV1(2)                                                --------->HSFB2a(2)                                                <---------HSFB2a(2)                               <--                                              <------ZmHOX2a(2)                                   ---                                              --------->CCA1(2)                                 <----                                             --------->ARR11(3)                            <---------ARR11(3)                                             --------->ARR14(2)       --------->ANAC46     --------->ARR11(3)                                             <---------ARR11(3)       --------->LBD16     <---------RVE1(1) -ARR14(2)             ---------->DOF2       --------->AGP1 <---------ANAC58         ================ >ARR14(2)           ---------->DOF2         <---------ARR14(2)   <-----------HVH21  ---------->DOF2-   aatttctccaatttcaattttgccaaagagcgagagagaaggaagaagatccagacgaagtggtttgccttcagggaacgagagagagaaagagatttta  2994500                                     <---------TOE2(3)                                 <---------ZAT2                                 --------->At4g35610                                 <---------At4g35610                                 --------->ZAT2                                <-----------ARR10                              --------->LBD16                          ------->MYC3                          <-------MYC2                          ------->MYC2                          <-------MYC3 <------ZmHOX2a(1)                         <---------TGA1a                       <---------DEAR3(1)                         ===============MYC_MYB               <------NtERF2          <----------CDC5--------->ANAC58                   <---------ANAC46          =========================MYC_MYB           --------->ANAC58         <---------At4g35610 <----------CDC5         --------->ANAC58         --------->At4g35610<---------LBD16          --------->ANAC46               <------NtERF2      <-----------HVH21  --------->TGA1a       --------->CCA1(2)                    --------->ATERF1(1)     <-----------RAV1(1) --------->ANAC46     --------->ARR11(3)                  --------->ALFIN1 -------MYB52(2)         --------->ANAC58 XXXXXXXXXXXXXXXXXXXX>MIR835-3P      <-----------RAV1(2) ------>MYB46(3)    --------->ZAT2   <---------TOE1(3)  <-----------RAV1(2) ------>NtERF2         --- -------GT1    ------>NtERF2--------->LBD16   <---------ARR11(3)       <----------CDC5 <------ZmHOX2a(1) ==================================bZIP_DOF   --------->ARR14(2)      <---------At4g35610     <------ZmHOX2a(1) -------->MYB52(1)<------NtERF2<------NtERF2  <---------ARR14(2)   ------>NtERF2  <---------DEAR3(1)   acaaacgatgtcgctgaggccgagcacacgcgcggagctaaggaagaagatatacaagacaggcgtcgatgccgatgaggccaggcggaggagagaggac  2994600                                                                                          --------->ZAT2                                                                                          --------->At4g35610                                                                                         <---------ARR14(2)                                                                                     <---------HSFB2a(2)                                                                                     --------->HSFB2a(2)                                                                             <---------ZAT2                                                                             --------->At4g35610                                                                             <---------At4g35610                                                                             ----------->RAV1(2)                                                                          --------->At4g35610                                                                          <---------At4g35610                          --------->ALFIN1                      <---------YAB1  ------>NtERF2                        <---------ANAC58                      --------->YAB1 --------->ZAT2--------->ATERF1(1)              <------ZmHOX2a(1)                <---------HSFB2a(1)       ----------->RAV1(1)             ----------->GT1   <---------ARR14(2)            --------->ICU4<-----------RAV1(2)             <----------ID1    --------->ARR14(2)  <---------ANAC46      ================RAV            --------->MYB59   <------ZmHOX2a(1)<---------HSFC1(2)      <---------At4g35610<---------ZAT2 ------>GLK1(2)         <---------ANAC58       --------->HSFC1(2)      --------->At4g35610<---------At4g35610   aatctcgtcgagattaggaaaaacaagcgtgaggatagtcttctcaagaagcgtcgtgaaggaatgatgcttcagcagcagctgcctctcggagctggcc  2994700                        <---------MYB52(1)                       <-------GAMYB                      --------->DEAR3(1)                     <------NtERF2                    ------>NtERF2                   --------->RAP2.6(2)                   --------->DEAR3(1)                   --------->RAP2.3(2)                   --------->ATERF1(2)                   <---------ATERF1(2)                  --------->ATERF1(1)                  --------->ERF1                 ------>NtERF2                 <---------ATERF1(1)                 <---------At4g35610                 --------->At4g35610                --------->DEAR3(1)              <---------At4g35610                  ------>ZmHOX2a(2)              --------->At4g35610                 --------->At4g35610                            ----          <---------ALFIN1                   <----------DOF2            <---------ANAC46      <------         ----------->HVH21    --------->CCA1(2)   <---------At4g35610   <---------ANAC58      -------    --------->PCF5--------->RAP2.3(1)   <XXXXXXXXXXXXXXXXXXXXMIR159C    <---------ANAC58   <------ZmHOX2a(2)   ttgatggtccccagaccgctgccgccgttgagaaacgagtaagttccctttgatctgaatttcgatacaattgtgcgtgattttgtgatttggatcacat  2994800                                                                                    --------->ZAT2                                                                                    --------->At4g35610                                                                               <---------GLK1(1)                                                                               <------ZmHOX2a(2)                               <---------MYB46(3)                             <---------ARR11(3)                     <----------DOF2                                          <-----------ARR10                    ------>ZmHOX2a(2)                                         --------->ARR11(3)                  --------->ARR11(3)                                       --------->HSFB2a(2)                  <---------ARR11(3)                               --------->TOE2(3)<---------At4g35610                  ------->TEIL<---------WOX13(1)                 -------->P<---------HSFB2a(2)      <            <---------ZAT6   >>>>>>>>>ARR2                       ------>MYB46(1)------>ZmHOX2a(2) <--     --------->AHL20(2)     --------->ATHB12                     ------>MYB83<---------CCA1(2)   ----    <---------YAB1<---------AGP1                 <----------DOF2=======================HOX2a_HOX2a--- ----->ATHB12     --------->ARR14(2)       --------->ALFIN1     ------>ZmHOX2a(1)   <---------ZAT2--- ---ANAC55(2)     <---------ARR14(2)    --------->DAG2          ======================HOX2a_HOX2a<--- -->ANAC55(2)  <---------WOX13(1)      ---------->DOF2         <---------MYB59<---------AGP1   ------   gatttgattatttagtgatggatctttgtttgattgttgaaaaaagtgaggctttgattctgtttcctacctcaattctagatctcagctcccaatctca  2994900  Previous    Next  AGI:  At1g09270.1    Description:  importin alpha-1 subunit, putative (IMPA4). similar to ATIMPALPHA3/MOS6 (IMPORTIN ALPHA 3), protein transporter [Arabidopsis thaliana] (TAIR:AT4G02150.1); similar to AT-IMP (Arabidopsis thaliana importin alpha), protein transporter [Arabidopsis thaliana] (TAIR:AT3G06720.1); similar to AT-IMP (Arabidopsis thaliana importin alpha), protein transporter [Arabidopsis thaliana] (TAIR:AT3G06720.2); similar to importin alpha-like protein [Brassica napus] (GB:ABO21639.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17409.1); similar to importin alpha 1 [Capsicum annuum] (GB:AAK38726.1); contains InterPro domain Armadillo-type fold; (Int Range:  from: 2994371    to: 2998224    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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