Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->GLK1(1)                                                                                     <---------ANAC58                                                                                     <---------ANAC46                                                                                    <---------LBD16                                                                                    <------NtERF2                                                                                   ------>NtERF2                                                                                  --------->ATERF1(2)                                                                                  <---------ATERF1(2)                                                                                <---------ZAT2                                                                                --------->ZAT2                                                                                --------->ZAT14                                                                                <---------At4g35610                                                                                --------->At4g35610                                                                               <-----------RAV1(1)                                                                            --------->ZAT6                                      --------->YAB1                        <---------ALFIN1                                     <---------YAB1                        --------->ZAT14       <---                                  <---------YAB1                           <---------ZAT14       ====                               <---------YAB1                           ------->GAMYB<---------ANAC58     ----------->GT1           <---------AHL20(2)                      --------->ANAC58 <---------ARR14(2) -------->YAB1              --------->AHL20(1)                         --------->ANAC58 --------->ARR14(2) ------>ARR11(3)            <---------AHL20(1)                         --------->ANAC55(2)       <--- ------>GLK1(2)          --------->AHL20(2) <---------ICU4             <---------ANAC55(2) <--------- ------GLK1(2)      ----------->GT1--------->YAB1                    --------->MYB52(1)<------NtERF2   aatcttgatgtaaattacaaagatgaaaaaaatattattatcatcaacattacttagttttattccatgtataacggaacactgctggcggatttacatt  2987000                                               <---------ALFIN1                                               --------->DEAR3(1)                                     <---------ANAC46                                     <---------ANAC55(2)                                     --------->ANAC55(2)                                     <---------TOE2(3)                                    <---------LBD16                              ----------------->AGL2                              ----------------->AG                  <---------ATHB12     ----------->GT1          <-----------------AG         <---------HSFB2a(1)    --------->DAG2            <-----------------AGL2       --------->HSFB2a(1)    <---------TOE1(3)         ----------------->AGL3--------->DEAR3(1)    <---------TOE2(3)      --------->WOX13(1) --------->ANAC58     <---------RAP2.6(3)              < --------------AGL1    --------->HSFB2a(2)    --------->ANAC58--------->WRKY12              --------- ===============================================MADS_MADS ------->TEIL                      --------- --------------AG      <---------HSFB2a(2) <---------ABI4(2)  --------->WRKY38(1)--------->AHL20(2) < --GT1            <----------DOF2  --------->MYB52(1)  <---------MYB52(2) ------->TEIL <---------YAB1   tcttataaggtaaattctatcttttctagcaatccaattacggatagcaccgcatcgacgaacgttggccatcatgtatgctataaattctgaataatat  2987100                                                                                                    -          <---------ANAC58                        <---------ANAC58                                  -          <---------ANAC46                        <---------ANAC58                                  < ---------TOE1(2)                              ------>ZmHOX2a(1)               --------->ATHB12     < >YAB1 --------->ANAC46                       <---------MYB59                 <-------TEIL          < >AHL20(2)<---------ANAC58              <----------DOF2                <----------DOF2 ----------->GT1 ---------TOE2(2)                    ---------->ID1   ---------->ARF1  ==============================   cgcatgtataagccgtgtttcaaaatgcaactccatcttgttctttttcctaacttgtctccgaatgcgatttctttatattcattgaattgtaaatttg  2987200                                                         --------->ZAT2       <---------GLK1(2)                                 <---------ZAT2 -------->O2 <---------ARR11(3)                         ------>MYB46(1) -------->TGA1a               --------->YAB1            ------>MYB83 ---------O2 --------->ARR11(3)                    <---------PCF5           <----------DOF2 ---------TGA1a------>ZmHOX2a(2)                 --------->LBD16            <---------DAG2 ---------ANAC46        --------->YAB1          <---------LBD16       --------->YAB1      --------->TOE1(2) =========bZIP_DOF    <---------WOX13(1)       <---------LBD16    <---------YAB1  <---------AHL20(2)<   cgacgtctagattgtgatctcttgaatgacaatggtattgaagaactaaaccgggaccaagctcgtttctaattagaactttattttttggacatgggaa  2987300                                                   --------->AHL20(2)                                                <---------ICU4                                               --------->ICU4                                          --------->YAB1                                       ------->GAMYB <---------YAB1                                      --------->MYB46(3)        <---------------AGL15                                      <---------MYB52(2)        =====================================                                    ----------->RAV1(1)       <-------TEIL                                --------->REM1(1)  --------->YAB1      ----------->GT1 -----------HVH21         --------->AHL20(1)  --------->AHL20(2)--------------->AGL15          *TSS   catgtcaaatgctacattcaatccaaaatatgttacaacaacaaacataaaaattataaaacgattcatttaagagtaatttgagactccagtttgaatt  2987400                   <-----------TBP                                                                <--                 --------->AHL20(2)                                                               ---          --------->YAB1                                                  <------------CBF      <----          <--------ATHB1                                                <---------AHL20(2)    -------         <---------ATHB51                                              <---------AHL20(2)     <------         <---------ATHB12                                    <---------------AGL15            -------     ------------>CBF        <---------YAB1                  --------------->AGL15            <------   <---------bZIP60(1)    --------->ICU4                     ========================================   --------->bZIP60(1)  ----------->GT1      <---------AHL20(2)     ----------->GT1          -------- ============================================================================MADS_MADS --------->YAB1   tgatgacatcaataatgcattatatatagttattagtgtgttagtattttcttatggccttaactaaaattagttaaattgaaacacaaacatgaattat  2987500  --------->CCA1(2) --------->AHL20(1) <---------AHL20(2)           <---------WRKY18(1) <---------AHL20(1)          --------->WRKY38(1) --------->ARR11(3)          --------->WRKY12 -------AHL20(2)         <---------YAB1 ------>AHL20(2)    --------->DAG2 -----YAB1         ---------->DOF2 -->ATHB51    <---------------AGL15                          --------->ATHB12 ---ICU4      --------->LBD16--------->WRKY45                --------->YAB1 ->ATHB1      --------------->AGL15------>MYB83  <-----------GT1                                 ---- --HAHB4     ----------------->AGL1------>MYB46(1)  --------->TOE1(3)                           <---- =============================MADS_MADS   <---------ATHB12  <---------ATHB12                    ----- ->ICU4      ----------------->AG--------->AtMYB61  --------->TOE2(3)  ------>ZmHOX2a(2)        <----   taatatataggtattgccgaaaaaagtatggttgaccaatcccaatggattcaaccttacaaatcataggtgatccacaaacatctaactaaaaccaaaa  2987600                                                                      --------->ARR11(3)                                                                      <---------ARR11(3)                                                                <---------ANAC55(2)                                                                --------->ANAC46                                                                --------->ANAC55(2)                                                                --------->ANAC58                  <---------ARR11(3)                            --------->ANAC55(1)                  --------->GLK1(2)                  --------->ARR14(2)      --------->CCA1(2)      <---------ZAT14         --------->ARR11(3)     <---------ARR11(3)      --------->ZAT14         <---------ARR14(2)     --------->ARR11(3)      <---------ZAT18         ------->TEIL    <---------HSFB2a(1)   <---------TOE2(3)         --------->ZAT18<------ZmHOX2a(1)   --------->ANAC58 ----->AHL20(2)   --------->ARR11(3)       <----------ID1      <---------LBD16 -----ARR11(3)   --------->RVE1(1)     <-----------GT1   ----------->GT1 ---->AHL20(1)   --------->CCA1(1)   <---------AHL20(2)<---------ANAC46              <---------GLK1(1) -----AHL20(1) --------->AHL20(2)   --------->YAB1  <---------CCA1(2)--------->HSFB2a(1)  --------->LBD16   tatttaagatataacaaaaaaatcttgcaagtgtactattttaacaggacaagtgtatcttgtaatacggaagatttcgaaaatttgaactcccgatttc  2987700                                                              --------->TOE2(3)                                                              <----------DOF2                             <---------ARR14(2)               --------->TOE1(3)                          <-----------------AGL1            ------->TEIL                       ------                          ----------------->AGL1   --------->TOE1(3)                          <------                     ------>ZmHOX2a(1)             --------->TOE2(3)                      --------->DAG2                 <-----------HVH21               <---------TOE2(3)                       ---------->DOF2              --------->At4g35610               --------->MYB52(1)                  <----------DOF2   aacataacaaaataacatctgtcctcgggcctatacaggcccagtaagtctaacgataaatgagccttaatggactagatttaaaactttataaaggggc  2987800                         <-------TEIL                      <------MYB46(1)                      <------MYB83                     --------->MYB59                 --------->ZAT6                                ------->GAMYB               ------>MYB46(1)        ----------->GT1          ----------->RAV1(1)               ----------->RAV1(1)   ------>ZmHOX2a(1)       -------->P            --------->ANAC55(2)               --------->MYB52(1)    --------->LBD16      ------->GAMYB            <---------ANAC58               ================================RAV       --------->ANAC58          <---------ANAC55(2)               ------>MYB83        ----------->RAV1(2)   --------->ANAC58          <---------ANAC58            --------->ANAC46   <---------HSFB2a(1)  --------->ANAC58          --------->ANAC58  <---------ANAC58   --------->MYB111(1)    --------->MYB52(1)--------->MYB46(3) <-----------GT1  <---------ANAC58   --------->MYB46(2)    --------->ICU4--------->ANAC46     --------->ANAC58   ---- >NtERF2    --------->ANAC58   --------->HSFC1(2)   --------->ANAC58          ----------->GT1    <--- ----ID1    --------->ANAC58   --------->HSFB2a(1)---------->DOF2      ---------->DOF2   ------>ZmHOX2a(2)   caaggcgttcacaaacccaacagtaggtacagaaggctcctggtaataactgaaaagcaacgcaaccacatagcaaagacaagttacttgatccaagaga  2987900  Previous    Next  AGI:  At1g09245.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G51250.1); contains InterPro domain Plant self-incompatibility S1 (InterPro:IPR010264) Range:  from: 2986941    to: 2987395    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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