Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <-----------GT1                                                                     --------->AHL20(2)                                                                     <---------AHL20(2)                                                                  --------->ATHB51                                                                  <--------ATHB1                                                                  <---------AHL20(2)                                                                  <---------ICU4                                                                  --------->AHL20(2)                                         <---------ANAC58        <---------ATHB51                             --------------->AtSPL3              --------->ICU4    <-----------GT1         <---------At5g28300          <---------AHL20(1)                         - ->MYB52(1)             --------->WOX13(1)    <---------ZAT6     <---------ATHB12                   - -AHL20(2)          --------->WOX13(1)   <---------ANAC58--------->ARR11(3)           ------>ZmHOX2a(2) >AHL20(2)   <---------CCA1(2)     --------->ARR11(3)    <---------ARR11(3)         <---------AGP1  -   gagattatacgtttcatatcatccatcaattactgtacatcttgcttagtgtaatacaatatatccaataatttataacatttttggatctaatccatgt  2984500              --------->YAB1                     <---------AHL20(2)    --------->ANAC58                  -------->HAHB4    --------->ANAC58                  --------->ATHB12        <------ZmHOX2a(1)    --------->ANAC46        --------->ICU4      --------->AHL20(2)                                  - -------->ANAC46       <------ZmHOX2a(1) ----------->GT1    --------->MYB59                         - -------->ANAC58       --------->YAB1--------->ICU4       --------->ICU4                            < -------->ANAC58    <---------LBD16  <---------YAB1     --------->WOX13(1)               <-------TEIL   tcacacaagtcatttttcataaccaggataattttgaaaatgattgtaaattttatagcaattaggaatgaaatttctataatcgaaaacatacactcta  2984600                                                                                      --------->ARR11(3)                                                                                    <---------AHL20(2)                                                                      --------->AHL20(1)                         --------->YAB1                               <---------ARR11(3)                   <---------MYB59                                    <---------AHL20(1)            --------->TOE1(3)   --------->YAB1             --------->TOE2(3)       --------->AHL20(2)            --------->TOE2(3)--------->GLK1(1)            <---------ICU4           <---------AHL20(2) -------->TOE1(3)  --------->TOE1(3)                     --------->ICU4        --------->AHL20(2) -------->TOE2(3)  --------->TOE2(3)                ----------->GT1   --------->ARR11(3) <----------DOF2 ---------MYB59   ----------------->AGL2            <---------ZAT6   <---------CCA1(2)<---------ARR11(3)   aacctaaactaaaaccttaaacctaaatcagaaatcatagaaactaaaccaatactgtaaacattaaactaatatcttgacttaaataaatcttttactt  2984700                 ------>ZmHOX2a(2)                <------ZmHOX2a(2)               <-----------ARR10               --------->ARR14(2)                                                                   -               <---------ARR14(2)                                                                   <               <---------ARR11(3)                                                                   -               --------->ARR11(3)                                                               -----               --------->GLK1(2)                                                     <---------ICU4 <              <------ZmHOX2a(1)                       --------->ANAC58               --------->YAB1<-            <---------TOE2(3)                         --------->ANAC46              --------->ICU4---   --------->TOE1(3)                                  --------->ANAC58  ----------->GT1      --------   <---------MYB59           ----------->GT1 <----------ID1      --------------->AGL15      ---------   --------->TOE2(3)  --------->TOE2(3)  ---------->DOF2       ------->TEIL<---------AHL20(1)--------   caaaacctaaatataaggatctattcttaattagttaaacaaaaaaagaaacaaaaacgcaagtgtacgttatatagtatatttgaataatgaaatgtta  2984800                                            ------------>CBF                                           ------>NtERF2                                          --------->ANAC58                                          --------->ANAC58                                      ------->GAMYB                                     --------->LBD16                                     --------->ANAC46                                ------>MYB46(1)                                    ------>MYB46(1)                                  ------>MYB83                                    -------->P                                     <---------ALFIN1 <---------ICU4                     ------>MYB83                                   *TSS--------->LBD16 -------->AHL20(2)                 <---------ALFIN1                                --------->DEAR3(1) ---------ATHB51                  <---------ALFIN1   <-----------GT1               --------->AtMYB61 -------->ICU4                 ------>ZmHOX2a(2)    --------->RVE1(1)             --------->MYB46(3) ---->AHL20(2)                <------ZmHOX2a(2)     --------->CCA1(1)           --------->ANAC58 ---------AHL20(2)           <---------ARR11(3)  --------->YAB1                 --------->ANAC58 --------AHL20(1)            <---------ARR14(2) <---------ATHB12                --------->ANAC46 ------>YAB1           <---------TOE2(3)<---------ALFIN1                     <---------ZAT18 ->TOE2(3) <----------DOF2   --------->ARR14(2) --------->AHL20(2)           <---------ZAT14        < -->GT1<---------GLK1(2)<---------REM1(1) --------->ANAC46                   --------->ZAT14   ------ --->GT1--------->GLK1(2)    --------->ARR11(3) ----------->TBP             <-----------HVH21 -------   aaataattagattctttttctagttgatgtagatccccaaccccacgccaataaatatccatccctccagtccaaacagttcacaccacccgagaacaca  2984900         ---------->DOF2                             <--------P      --------------->AGL15                         <---------ANAC58      <---------------AGL15                  <---------DDF1  --------->KAN4(2)                         <---------ETT(2) <---------KAN4(1)                          <<<<<<<<<<bZIP19 --------->KAN4(1)                          <<<<<<<<<<bZIP23                              ------>ZmHOX2a(2) ---------YAB1     ----------->GT1          <---------bZIP60(1)              --------->ANAC58     --- --->ANAC46        <----------ID1           --------->ETT(2)       --------->ATHB12      <------ZmHOX2a(2) -->TOE1(2)    ---------->DOF2    --------->TOE2(3) <---------ANAC58         --------->ANAC58  ------   cgattattctccaaagagaaagagaaaaatcaataacctcatagtgtcgacatgggttgccaagacgaacaattggtgcaaacaatatgcgatctctacg  2985000                                                                                 --------->AtMYB61                                                                                 <---------MYB46(2)                                                                                 <---------MYB55(2)                                                                                 --------->MYB46(3)       ---------->DOF2                                          --------->ARR14(2)    ------>ZmHOX2a(2)                                     <---------At4g35610    <---------MYB111(1)   <------ZmHOX2a(2)                                      --------->At4g35610    <---------MYB111(2)  <---------AGP1                    <---------ARR11(3)    <---------ZAT2        --------->ANAC46  <---------ARR11(3)                --------->ARR11(3)    --------->ZAT2<-------TEIL  --------->ARR11(3)            --------->LBD16       --------->ANAC58<-------MYC3    --------->TOE1(3) --------->RVE1(1)           ------>MYB83             --------->ANAC46------->MYC2    --------->TOE2(3) ------->DOF2                ------>MYB46(1)          --------->ANAC58<-------MYC2 ------>MYB46(1)<-- --->ANAC46                --------->AtMYB61        ---------->DOF2   ------->MYC3 ------>MYB83  ----   aaaagatctcaaagcttgagagtctaaaaccatccgaagatgtcaacattctcttcaagcagctcgtttccacatgcataccaccaaaccctaacatcga  2985100            ----------->HVH21          --------->ALFIN1                        --------->CCA1(2)       <---------ARR11(3)     <-------TEIL       <---------ARR14(2)                                <- ---------HVH21              --------->CCA1(2)   <---------ARR11(3)                             ----- ----->bZIP60(1)            --------->ARR11(1)   --------->ARR14(2) <-----------HVH21         -------   tgtcaccaagatgtgtgacagagtccaagagattcgacttaatctcatcaagatttgtggtctagccgaaggtcacttagaaaaccatttctcttcgatc  2985200                          <---------YAB1                    ------>MYB46(1)                    ------>MYB83                   <---------ALFIN1           --------->ANAC58    <---------AHL20(2)           --------->ANAC58<---------ICU4    <---------ICU4                                ------>ZmHOX2a(1)    --------->TOE1(1)--------->bZIP60(2)<-----------GT1                                    --------->HSFB2a(2) --------WRKY18(1)------->GAMYB--------->AHL20(2)                        <---------HSFB2a(1) ->ZmHOX2a(2)   --------->ANAC58 <-----------GT1     --------->MYB46(3)---------->DOF2     <---------HSFB2a(2) -->ARR11(3)    --------->ANAC58<-----------GT1 <-----------GT1    <---------LBD16     --------->AtMYB61   ttgacctcttaccaagacaacccacttcatcatttaaacattttcccttattacaacaactatttgaaactcggaaagctcgagttcgacctcctcgaac  2985300                                          ====================HOX2a_HOX2a                                          ==============HOX2a_HOX2a                                        <---------ARR14(2)                                        --------->ARR14(2)                                        <---------AGP1                                        --------->ARR11(3)               ---------->ID1    <---------YAB1           <----------DOF2     <----------DOF2          <---------ANAC58    <---------ANAC46          <---------ANAC58    <---------ANAC58                             <---------ANAC58  <---------MYB59             <---------ANAC58   ------>ZmHOX2a(1)     <---------ANAC58  --------->TOE2(3)      --------->ALFIN1 ------>ZmHOX2a(2)            <---------ANAC58  ---------->DOF2  --------->TOE1(3)---------->DOF2--------->ATHB12     ------>ZmHOX2a(1)   <---------ANAC58       ---   aaaacctaaatggctttgtcccaaagagtgtggctttcattggatctggtcctcttcctctcacttccatcgttcttgcttcattccatctcaaagacac  2985400  Previous    Next  AGI:  At1g09240.1    Description:  nicotianamine synthase, putative. Identical to Nicotianamine synthase 3 (NAS3) [Arabidopsis Thaliana] (GB:O80483); similar to nicotianamine synthase, putative [Arabidopsis thaliana] (TAIR:AT1G56430.1); similar to putative nicotianamine synthase [Arabidopsis halleri subsp. halleri] (GB:CAE45015.1); contains InterPro domain Nicotianamine synthase; (InterPro:IPR004298) Range:  from: 2984883    to: 2986132    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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